Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= psV30504.Seq
         (518 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY070671-1|AAL48142.1|  148|Drosophila melanogaster RH07540p pro...   142   3e-34
AE013599-3413|AAF46862.1|  148|Drosophila melanogaster CG4046-PA...   142   3e-34
AY089671-1|AAL90409.1|  395|Drosophila melanogaster RH44312p pro...    29   3.8  
AE014297-663|AAF54157.3|  395|Drosophila melanogaster CG2957-PA ...    29   3.8  
AE014296-2810|AAF49404.2| 1734|Drosophila melanogaster CG9715-PA...    28   8.7  

>AY070671-1|AAL48142.1|  148|Drosophila melanogaster RH07540p
           protein.
          Length = 148

 Score =  142 bits (344), Expect = 3e-34
 Identities = 64/84 (76%), Positives = 76/84 (90%)
 Frame = +3

Query: 3   QEARRXPIQAVQVFGRKKTATAVAYCKRGHGMLRVNGRPLDLVXPRLLQYKLQEPILLLG 182
           Q+ RR P+QAVQVFGRKKTATAVAYCKRG+G+L+VNGRPL+ + P++LQYKLQEP+LLLG
Sbjct: 2   QQKRREPVQAVQVFGRKKTATAVAYCKRGNGLLKVNGRPLEQIEPKVLQYKLQEPLLLLG 61

Query: 183 KEKFSMVXIRVTVKGGGHVAQVYA 254
           KEKF+ V IRV V GGGHVAQ+YA
Sbjct: 62  KEKFAGVDIRVRVSGGGHVAQIYA 85



 Score =  128 bits (309), Expect = 4e-30
 Identities = 59/62 (95%), Positives = 61/62 (98%)
 Frame = +2

Query: 257 RQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVADPRRCEPKKFGGPGARARYQKS 436
           RQAISKAL+AFYQKYVDEASKKEIKDILVQYDR+LLV DPRRCEPKKFGGPGARARYQKS
Sbjct: 87  RQAISKALVAFYQKYVDEASKKEIKDILVQYDRTLLVGDPRRCEPKKFGGPGARARYQKS 146

Query: 437 YR 442
           YR
Sbjct: 147 YR 148


>AE013599-3413|AAF46862.1|  148|Drosophila melanogaster CG4046-PA
           protein.
          Length = 148

 Score =  142 bits (344), Expect = 3e-34
 Identities = 64/84 (76%), Positives = 76/84 (90%)
 Frame = +3

Query: 3   QEARRXPIQAVQVFGRKKTATAVAYCKRGHGMLRVNGRPLDLVXPRLLQYKLQEPILLLG 182
           Q+ RR P+QAVQVFGRKKTATAVAYCKRG+G+L+VNGRPL+ + P++LQYKLQEP+LLLG
Sbjct: 2   QQKRREPVQAVQVFGRKKTATAVAYCKRGNGLLKVNGRPLEQIEPKVLQYKLQEPLLLLG 61

Query: 183 KEKFSMVXIRVTVKGGGHVAQVYA 254
           KEKF+ V IRV V GGGHVAQ+YA
Sbjct: 62  KEKFAGVDIRVRVSGGGHVAQIYA 85



 Score =  128 bits (309), Expect = 4e-30
 Identities = 59/62 (95%), Positives = 61/62 (98%)
 Frame = +2

Query: 257 RQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVADPRRCEPKKFGGPGARARYQKS 436
           RQAISKAL+AFYQKYVDEASKKEIKDILVQYDR+LLV DPRRCEPKKFGGPGARARYQKS
Sbjct: 87  RQAISKALVAFYQKYVDEASKKEIKDILVQYDRTLLVGDPRRCEPKKFGGPGARARYQKS 146

Query: 437 YR 442
           YR
Sbjct: 147 YR 148


>AY089671-1|AAL90409.1|  395|Drosophila melanogaster RH44312p
           protein.
          Length = 395

 Score = 29.1 bits (62), Expect = 3.8
 Identities = 14/23 (60%), Positives = 15/23 (65%)
 Frame = +2

Query: 359 LLVADPRRCEPKKFGGPGARARY 427
           LL  D RR E KKFG  GAR +Y
Sbjct: 368 LLTRDYRRRERKKFGQEGARRKY 390


>AE014297-663|AAF54157.3|  395|Drosophila melanogaster CG2957-PA
           protein.
          Length = 395

 Score = 29.1 bits (62), Expect = 3.8
 Identities = 14/23 (60%), Positives = 15/23 (65%)
 Frame = +2

Query: 359 LLVADPRRCEPKKFGGPGARARY 427
           LL  D RR E KKFG  GAR +Y
Sbjct: 368 LLTRDYRRRERKKFGQEGARRKY 390


>AE014296-2810|AAF49404.2| 1734|Drosophila melanogaster CG9715-PA
           protein.
          Length = 1734

 Score = 27.9 bits (59), Expect = 8.7
 Identities = 14/38 (36%), Positives = 20/38 (52%)
 Frame = +2

Query: 344 QYDRSLLVADPRRCEPKKFGGPGARARYQKSYR*AFKK 457
           ++D+ LLVA P  C PKK   P    + Q+  +   KK
Sbjct: 233 RFDQRLLVAIPPNCPPKKQNKPQQNKQQQQQNKQQQKK 270


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,103,766
Number of Sequences: 53049
Number of extensions: 492623
Number of successful extensions: 1394
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1360
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1394
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1908489216
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)