Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= psV30502.Seq
(748 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_01_0351 + 2750253-2751042,2751951-2751958,2752122-2752149,275... 37 0.015
06_01_1202 + 10389090-10389140,10389218-10389853,10390355-103904... 35 0.079
04_04_1188 + 31579833-31579914,31580001-31580176,31580822-315809... 34 0.14
05_06_0106 - 25611239-25611295,25611388-25611477,25611582-256116... 33 0.24
03_05_0519 - 25131614-25134778 32 0.42
08_02_1554 + 27841801-27842007,27842282-27842455,27842554-278426... 31 0.74
06_03_0529 - 21788132-21788395,21788414-21788511,21789458-217899... 31 0.97
04_03_0850 - 20269047-20270595,20270708-20270751,20271248-202713... 31 0.97
02_02_0489 + 10869482-10871218 31 0.97
02_02_0307 - 8809724-8811589,8811681-8811762,8812130-8812242,881... 31 1.3
11_07_0008 + 27296049-27296395,27296681-27296963,27297575-27297595 30 1.7
09_02_0273 - 6577272-6577292,6577904-6578186,6578472-6578818 30 1.7
08_02_1085 + 24237804-24238403 30 1.7
11_06_0143 + 20589574-20589684,20590256-20590873,20590943-205910... 30 2.2
07_03_1707 + 28866054-28866065,28866185-28866269,28866398-28867149 30 2.2
05_07_0274 - 28873531-28873644,28873727-28873981,28874111-288741... 30 2.2
08_02_1167 + 24847689-24848156 29 3.0
01_06_1519 + 37942389-37943702,37944142-37944266,37944358-379444... 29 3.0
06_01_0926 - 7139220-7139318,7139394-7139478,7139573-7139643,713... 29 3.9
05_04_0395 - 20921606-20921869,20921971-20922112,20922206-209223... 29 3.9
04_01_0568 - 7279478-7279590,7279749-7279988,7280078-7280141,728... 29 3.9
01_06_1790 - 39888313-39888350,39888437-39888530,39888612-398888... 29 3.9
01_01_0561 + 4122751-4123140,4124226-4124484,4124639-4124985 29 3.9
08_01_0521 + 4540627-4540794,4541822-4541836,4541957-4543036 28 6.9
06_02_0083 - 11539955-11540257,11540594-11540742,11540938-115410... 28 6.9
06_02_0013 - 10581449-10585105 28 6.9
03_05_0211 - 22020515-22020687,22020801-22020831,22022060-220221... 28 6.9
01_07_0078 - 40923115-40924016,40924341-40924416,40924686-40924718 28 6.9
10_01_0275 - 2904601-2904900,2905083-2905233,2905522-2905598,290... 28 9.1
08_02_1088 + 24247781-24249043 28 9.1
08_02_0633 + 19540584-19541383,19541557-19541610,19542123-19542444 28 9.1
03_03_0210 + 15470680-15470715,15473088-15473342,15473417-154734... 28 9.1
>05_01_0351 +
2750253-2751042,2751951-2751958,2752122-2752149,
2754692-2754775,2755780-2757548
Length = 892
Score = 37.1 bits (82), Expect = 0.015
Identities = 21/75 (28%), Positives = 35/75 (46%), Gaps = 2/75 (2%)
Frame = +2
Query: 86 DAAVDKKEVAPEEVTSTEPKESPVKKSPAKKV-EAAESNGKENGTDEAPEDSPAENGVPK 262
D D K P T+ + ++ P KK PA + + ++ K G AP D E K
Sbjct: 389 DPPEDNKASKPNAATAADGQKPPAKKKPAARPGDTTAASAKVAGVKRAPSDRQEELATKK 448
Query: 263 KATMH-LRTVMPQKR 304
KA ++ ++T+ K+
Sbjct: 449 KAKLNKIKTLATDKK 463
>06_01_1202 +
10389090-10389140,10389218-10389853,10390355-10390439,
10390536-10390654,10391251-10391318,10391401-10391710
Length = 422
Score = 34.7 bits (76), Expect = 0.079
Identities = 16/50 (32%), Positives = 26/50 (52%)
Frame = +2
Query: 137 EPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAENGVPKKATMHLRT 286
E K+ +K+ P+ V+A K +E P+DSPA KK++ + T
Sbjct: 365 EDKDKKIKRKPSPTVQATTPPAKRRKNNEVPQDSPAMRTRSKKSSPTMGT 414
>04_04_1188 +
31579833-31579914,31580001-31580176,31580822-31580923,
31581015-31581245,31581821-31581922,31582092-31582184,
31582275-31582379,31582455-31582514,31582621-31582698,
31582778-31582924,31583011-31583109,31583178-31583267,
31583360-31583451,31583529-31583646,31583783-31583871,
31583998-31584088,31584203-31584294,31584442-31584749,
31584866-31584897
Length = 728
Score = 33.9 bits (74), Expect = 0.14
Identities = 20/62 (32%), Positives = 32/62 (51%)
Frame = +2
Query: 83 ADAAVDKKEVAPEEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAENGVPK 262
A +A +K V + V S E + K+ P KKVE++ S + ++E + P + PK
Sbjct: 39 AVSAKKQKTVREKVVPSKEEAKKVKKQPPPKKVESSSSEEDSSESEEEVKAQPKKTVQPK 98
Query: 263 KA 268
KA
Sbjct: 99 KA 100
Score = 29.9 bits (64), Expect = 2.2
Identities = 22/85 (25%), Positives = 33/85 (38%), Gaps = 9/85 (10%)
Frame = +2
Query: 77 TMADAAVDKKEVAPEEVTSTEPKES---------PVKKSPAKKVEAAESNGKENGTDEAP 229
T A A KKE + E S +S P K + KK E + + + E+
Sbjct: 235 TKAPAVAKKKEESSESSDSESDSDSDDEAAKTIIPAKAAAVKKEEESSDSSDSDSESESD 294
Query: 230 EDSPAENGVPKKATMHLRTVMPQKR 304
D PA+ +P K + T Q +
Sbjct: 295 SDEPAKPTIPAKRPLTKDTKKGQSK 319
Score = 28.7 bits (61), Expect = 5.2
Identities = 16/59 (27%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
Frame = +2
Query: 95 VDKKEVAPEEVTSTEPKESPVKK--SPAKKVEAAESNGKENGTDEAPEDSPAENGVPKK 265
+ + + E+ +S E + VK+ + AKKV+A + + + + EDS E+ P K
Sbjct: 362 ISSDDESDEDDSSDESSDEDVKQKQTQAKKVQAPVAQESSSSDESSEEDSDMESDEPAK 420
>05_06_0106 -
25611239-25611295,25611388-25611477,25611582-25611669,
25611757-25611836,25611968-25612120,25612403-25612546,
25612633-25612884,25612985-25613116,25613207-25613287,
25613368-25613488,25613930-25614025,25614195-25614298,
25614481-25614567,25614690-25614803,25614871-25614930,
25615007-25615102,25615316-25615366,25615457-25615562,
25615642-25615713,25616117-25616172,25616446-25616508,
25616636-25616764
Length = 743
Score = 33.1 bits (72), Expect = 0.24
Identities = 17/32 (53%), Positives = 20/32 (62%)
Frame = +2
Query: 101 KKEVAPEEVTSTEPKESPVKKSPAKKVEAAES 196
K E PE+ T T PKE P KK+ K+ E AES
Sbjct: 476 KNETRPEK-TETAPKEKPSKKNRKKEKEVAES 506
>03_05_0519 - 25131614-25134778
Length = 1054
Score = 32.3 bits (70), Expect = 0.42
Identities = 22/67 (32%), Positives = 29/67 (43%), Gaps = 1/67 (1%)
Frame = +2
Query: 74 ATMADAAVDKKEVAP-EEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAEN 250
A A AA +KK AP EE + E K+ K + A K E + K + + P E
Sbjct: 182 AAAASAAEEKKPEAPAEEKKAEEAKKEEKKSAEADKKEEKDDKKKSPEKGKKDGEKPKEE 241
Query: 251 GVPKKAT 271
G K T
Sbjct: 242 GKAKDET 248
>08_02_1554 +
27841801-27842007,27842282-27842455,27842554-27842653,
27843273-27843725,27843936-27844469,27844500-27844580,
27844690-27844781,27844890-27844963,27845071-27845293,
27845429-27845522,27845607-27845761,27845899-27846129,
27846803-27847003,27847257-27847382,27847497-27847558,
27847775-27847892,27848040-27848324,27848475-27848513
Length = 1082
Score = 31.5 bits (68), Expect = 0.74
Identities = 16/63 (25%), Positives = 30/63 (47%)
Frame = +2
Query: 95 VDKKEVAPEEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAENGVPKKATM 274
+D + VTS+ PK+S V+ P +V A +EN + + + S + KA +
Sbjct: 141 LDGHNIVKFVVTSSSPKKSLVQLVPGTEVAVAPKKRRENSSQDVQKQSALKEEAQTKALL 200
Query: 275 HLR 283
++
Sbjct: 201 RVQ 203
>06_03_0529 -
21788132-21788395,21788414-21788511,21789458-21789953,
21790033-21790134,21790218-21790270,21790354-21790414,
21790491-21790640,21791298-21791350,21794125-21794152
Length = 434
Score = 31.1 bits (67), Expect = 0.97
Identities = 18/49 (36%), Positives = 26/49 (53%)
Frame = +2
Query: 95 VDKKEVAPEEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSP 241
V KK P+E + E K+ K++P KVEA+E +EAP+ P
Sbjct: 239 VQKKAAPPKESKAKEAKKEAPKEAPKPKVEASEE-------EEAPKPKP 280
>04_03_0850 -
20269047-20270595,20270708-20270751,20271248-20271329,
20274027-20274115
Length = 587
Score = 31.1 bits (67), Expect = 0.97
Identities = 26/82 (31%), Positives = 37/82 (45%), Gaps = 12/82 (14%)
Frame = +2
Query: 89 AAVDKKEVAPEEVTSTEPKESPVKKSPAKK-VEAAESNGKE-----------NGTDEAPE 232
+ + +K+V V STE K KSPAKK V +A + N + EA E
Sbjct: 238 SVLPEKDVISSSVKSTEAKNKVRNKSPAKKNVRSASPTTTKVQKTRIQDVISNKSSEASE 297
Query: 233 DSPAENGVPKKATMHLRTVMPQ 298
D PA V K+ ++T P+
Sbjct: 298 DLPAGPAVAKQRKGKMKTSSPR 319
>02_02_0489 + 10869482-10871218
Length = 578
Score = 31.1 bits (67), Expect = 0.97
Identities = 18/58 (31%), Positives = 31/58 (53%)
Frame = +2
Query: 98 DKKEVAPEEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAENGVPKKAT 271
++ E + + +EP+ PVKK AKK + AE+ K + AP A+ P+K++
Sbjct: 89 EEGEEVEGDSSESEPEPEPVKKESAKKAK-AEAKKKRAAPEPAP-SGKAKKAKPEKSS 144
>02_02_0307 - 8809724-8811589,8811681-8811762,8812130-8812242,
8812361-8812492,8812681-8812864,8813002-8813135,
8813552-8813656,8813738-8813839,8813930-8814022,
8814136-8814456,8814595-8814696,8814791-8814853,
8815213-8815708,8815964-8816124,8816213-8816743,
8817077-8817118,8817203-8817334,8817639-8817703,
8817858-8818169,8818262-8818334,8818425-8818517,
8819440-8819501,8819740-8819809
Length = 1777
Score = 30.7 bits (66), Expect = 1.3
Identities = 15/34 (44%), Positives = 17/34 (50%)
Frame = +2
Query: 116 PEEVTSTEPKESPVKKSPAKKVEAAESNGKENGT 217
P EV E + SP KS +E S KENGT
Sbjct: 1165 PSEVVDDEDQRSPPPKSDHSLIEKESSEVKENGT 1198
>11_07_0008 + 27296049-27296395,27296681-27296963,27297575-27297595
Length = 216
Score = 30.3 bits (65), Expect = 1.7
Identities = 14/50 (28%), Positives = 25/50 (50%)
Frame = +2
Query: 137 EPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAENGVPKKATMHLRT 286
E K+ +K+ P+ V+A K +E P D+PA K+++ + T
Sbjct: 158 EDKDKKIKRKPSPIVQATTPPAKRRKNNEIPHDNPAMRTRSKQSSPSMGT 207
>09_02_0273 - 6577272-6577292,6577904-6578186,6578472-6578818
Length = 216
Score = 30.3 bits (65), Expect = 1.7
Identities = 14/50 (28%), Positives = 25/50 (50%)
Frame = +2
Query: 137 EPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAENGVPKKATMHLRT 286
E K+ +K+ P+ V+A K +E P D+PA K+++ + T
Sbjct: 158 EDKDKKIKRKPSPIVQATTPPAKRRKNNEIPHDNPAMRTRSKQSSPSMGT 207
>08_02_1085 + 24237804-24238403
Length = 199
Score = 30.3 bits (65), Expect = 1.7
Identities = 21/65 (32%), Positives = 34/65 (52%), Gaps = 2/65 (3%)
Frame = +2
Query: 83 ADAAVDKKEVAPEEVT--STEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAENGV 256
A AA K A + + S P E+P +S A+ EA E +GK + AP+DS + +
Sbjct: 64 APAAAPPKAAAAKAPSGKSEAPSEAPDAESGAESPEAGEESGKSPAS--APKDSSSSSSE 121
Query: 257 PKKAT 271
++A+
Sbjct: 122 EEEAS 126
>11_06_0143 +
20589574-20589684,20590256-20590873,20590943-20591010,
20591159-20591234,20591311-20591372,20591452-20591603,
20591889-20592052,20592129-20592317,20592417-20592538,
20592620-20592827,20593238-20593291,20593457-20593626,
20594265-20594355,20595405-20595529,20596372-20596444,
20596822-20596914,20597482-20597728,20598305-20598364,
20598461-20598590,20599008-20599014
Length = 939
Score = 29.9 bits (64), Expect = 2.2
Identities = 18/55 (32%), Positives = 32/55 (58%), Gaps = 4/55 (7%)
Frame = +2
Query: 119 EEVTSTEPKESPVKKSPAKKVE---AAESNGKENGTDEAPEDSPAENG-VPKKAT 271
++ + +++PVK P+KK++ AE++GK G D+ ED E+ P KA+
Sbjct: 108 DDFVAPSKRKTPVKPPPSKKLKGASTAEAHGK-TGLDDDNEDKMDEDAKTPSKAS 161
>07_03_1707 + 28866054-28866065,28866185-28866269,28866398-28867149
Length = 282
Score = 29.9 bits (64), Expect = 2.2
Identities = 16/55 (29%), Positives = 27/55 (49%)
Frame = +2
Query: 101 KKEVAPEEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAENGVPKK 265
KKE + E K+ P +K P +K ++ E K+ G ++ PE+ E +K
Sbjct: 84 KKEEKKPDQAKKEEKKQPEEKKPEEKKKSEEE--KKKGDEKKPEEGKKEEKKEEK 136
>05_07_0274 -
28873531-28873644,28873727-28873981,28874111-28874179,
28874277-28874415,28874511-28875076,28875225-28875326,
28875425-28875491,28875576-28876072,28876148-28876212,
28876470-28876567,28876652-28876694,28876870-28876963,
28877325-28877360,28877454-28877542,28877667-28877788,
28878193-28878404
Length = 855
Score = 29.9 bits (64), Expect = 2.2
Identities = 20/65 (30%), Positives = 29/65 (44%)
Frame = +2
Query: 89 AAVDKKEVAPEEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAENGVPKKA 268
AA + +PE E E+P K K+ S KE T+ ++S AE G +
Sbjct: 744 AATAENSESPESKKEKENSENPESKEKEKE-RKENSENKEEKTENKQDNSKAEGGT--EG 800
Query: 269 TMHLR 283
T+ LR
Sbjct: 801 TIDLR 805
>08_02_1167 + 24847689-24848156
Length = 155
Score = 29.5 bits (63), Expect = 3.0
Identities = 17/61 (27%), Positives = 24/61 (39%)
Frame = +2
Query: 86 DAAVDKKEVAPEEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAENGVPKK 265
+A A +V T+P + +PA+ V AE+ KE A E P P
Sbjct: 39 EATAAAAAAAAAQVEETKPADDQAAAAPAETVAEAEAEAKEAEPAAAEEAEPEAETAPPA 98
Query: 266 A 268
A
Sbjct: 99 A 99
Score = 27.9 bits (59), Expect = 9.1
Identities = 14/57 (24%), Positives = 23/57 (40%)
Frame = +2
Query: 77 TMADAAVDKKEVAPEEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAE 247
T+A+A + KE P EP+ + + EA E+ E + +P E
Sbjct: 69 TVAEAEAEAKEAEPAAAEEAEPEAETAPPAAIAEAEAGEAKEPEPEAEAEAAAAPVE 125
>01_06_1519 +
37942389-37943702,37944142-37944266,37944358-37944499,
37944602-37944848,37946139-37946196,37947629-37947913,
37947988-37948120
Length = 767
Score = 29.5 bits (63), Expect = 3.0
Identities = 15/44 (34%), Positives = 19/44 (43%)
Frame = +2
Query: 101 KKEVAPEEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPE 232
K E + EE + EPK PAK+ AE+ E PE
Sbjct: 171 KAEASSEEAKTEEPKAEAAADEPAKEESKAEAAPAEEAKPAEPE 214
>06_01_0926 - 7139220-7139318,7139394-7139478,7139573-7139643,
7139996-7140076,7140805-7140895,7141242-7141330,
7141749-7141802,7141906-7142085,7142175-7142237,
7142575-7142705,7142807-7142900,7143343-7143684,
7143957-7144348,7145010-7148487,7149101-7149187,
7149324-7149367,7149495-7149591,7150429-7150572
Length = 1873
Score = 29.1 bits (62), Expect = 3.9
Identities = 14/63 (22%), Positives = 32/63 (50%)
Frame = +2
Query: 83 ADAAVDKKEVAPEEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAENGVPK 262
AD + + ++VAP +V + +P E+ + + +E +EN + + + E+ P+
Sbjct: 868 ADQSSESQDVAPAKVATEQPLENQKAAASEQPLEPQHEAYEENPQEHNSDATAKESSEPE 927
Query: 263 KAT 271
+ T
Sbjct: 928 RDT 930
>05_04_0395 -
20921606-20921869,20921971-20922112,20922206-20922330,
20922758-20923984
Length = 585
Score = 29.1 bits (62), Expect = 3.9
Identities = 18/64 (28%), Positives = 26/64 (40%)
Frame = +2
Query: 83 ADAAVDKKEVAPEEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAENGVPK 262
A+A + + A EE + EPK K K AA + + A E PAE +
Sbjct: 141 AEAEAEAEAAATEEPKTEEPKTEEPAKEEEPKAAAAAAAEEPKAEAAAEEAKPAEPETEE 200
Query: 263 KATM 274
K +
Sbjct: 201 KTVV 204
Score = 28.3 bits (60), Expect = 6.9
Identities = 20/56 (35%), Positives = 27/56 (48%), Gaps = 4/56 (7%)
Frame = +2
Query: 113 APEEVTSTEPK--ESPVKKSPAKKVEA-AESNGKENGTDEAPE-DSPAENGVPKKA 268
A E EPK E+P + P + EA AE+ E E P+ + PA+ PK A
Sbjct: 119 AEEPAKEEEPKAAEAPAAEEPKAEAEAEAEAAATEEPKTEEPKTEEPAKEEEPKAA 174
>04_01_0568 - 7279478-7279590,7279749-7279988,7280078-7280141,
7280242-7280547,7280643-7280857,7281395-7281689,
7281906-7281983,7282070-7282705,7283016-7283102,
7283945-7284265,7285503-7287599
Length = 1483
Score = 29.1 bits (62), Expect = 3.9
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = -1
Query: 715 SILCESVHCDAFSPLAVTYINLQFARYFY 629
SI+ S+ CDA S L VT++ + A+ F+
Sbjct: 993 SIVAASIVCDAISTLFVTFLGFKSAQVFF 1021
>01_06_1790 -
39888313-39888350,39888437-39888530,39888612-39888836,
39888944-39889018,39889144-39889212,39889319-39889384,
39889492-39889713,39889794-39890681,39890973-39891053,
39892546-39892598,39893010-39893088,39893218-39893319
Length = 663
Score = 29.1 bits (62), Expect = 3.9
Identities = 16/61 (26%), Positives = 33/61 (54%)
Frame = +2
Query: 101 KKEVAPEEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAENGVPKKATMHL 280
K++ + + STE + +++ K +AA+SN + G + +DS ++ P K +H+
Sbjct: 401 KEDSSGKRCKSTEESNAAAEENSGKG-KAAQSNSENGGGKKQGKDSSSKPPEPPKDYIHV 459
Query: 281 R 283
R
Sbjct: 460 R 460
>01_01_0561 + 4122751-4123140,4124226-4124484,4124639-4124985
Length = 331
Score = 29.1 bits (62), Expect = 3.9
Identities = 18/59 (30%), Positives = 27/59 (45%)
Frame = +2
Query: 134 TEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAENGVPKKATMHLRTVMPQKRKR 310
+E K S KK+ K EA ES +GT+E P E+ L+ + K+K+
Sbjct: 234 SESKSSKKKKNKKAK-EAKESQEPADGTEETASAEPDEDTTSVDVKERLKKMASMKKKK 291
>08_01_0521 + 4540627-4540794,4541822-4541836,4541957-4543036
Length = 420
Score = 28.3 bits (60), Expect = 6.9
Identities = 13/48 (27%), Positives = 24/48 (50%)
Frame = +2
Query: 92 AVDKKEVAPEEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPED 235
A +K S PK++ +++ K + E +G ++ TD+A ED
Sbjct: 219 AEEKSSKNTTTAESRHPKDTSLEEKQVKSATSKEEDGLQDKTDDAIED 266
>06_02_0083 -
11539955-11540257,11540594-11540742,11540938-11541025,
11541151-11541462,11541554-11541709,11541941-11542156,
11542251-11542508,11542740-11542943,11543052-11543096
Length = 576
Score = 28.3 bits (60), Expect = 6.9
Identities = 13/23 (56%), Positives = 15/23 (65%)
Frame = +2
Query: 149 SPVKKSPAKKVEAAESNGKENGT 217
SP + AKKV A+SNG NGT
Sbjct: 499 SPNRPVSAKKVPGAKSNGSANGT 521
>06_02_0013 - 10581449-10585105
Length = 1218
Score = 28.3 bits (60), Expect = 6.9
Identities = 20/60 (33%), Positives = 27/60 (45%), Gaps = 4/60 (6%)
Frame = +2
Query: 116 PEEVTSTEPKESPVKKSPAKKVEAAESNG----KENGTDEAPEDSPAENGVPKKATMHLR 283
P V + E K SP ++E AE N ENG + E SP E+G + HL+
Sbjct: 625 PGTVVTPEEKVSPNVPVGHSEIEIAEDNKIAPHVENGYIDKNERSPNEDGNRNQTAKHLK 684
>03_05_0211 -
22020515-22020687,22020801-22020831,22022060-22022169,
22022715-22023102,22023344-22023397,22023739-22023849,
22023956-22024015,22024618-22024694,22026155-22026188,
22026267-22027235
Length = 668
Score = 28.3 bits (60), Expect = 6.9
Identities = 20/62 (32%), Positives = 26/62 (41%)
Frame = +2
Query: 101 KKEVAPEEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAENGVPKKATMHL 280
KK V P+ +S+E KE KKS KKV + E G E + KK +
Sbjct: 543 KKSVTPKRPSSSE-KEIKDKKSSGKKVTKGKGESAEVGLPSKDELRKTITEILKKVDFNT 601
Query: 281 RT 286
T
Sbjct: 602 AT 603
>01_07_0078 - 40923115-40924016,40924341-40924416,40924686-40924718
Length = 336
Score = 28.3 bits (60), Expect = 6.9
Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 2/43 (4%)
Frame = +2
Query: 146 ESPVKKSPAKKVEAAESNGKENGTDEA--PEDSPAENGVPKKA 268
E P ++ P ++S +N +DE+ P D PAE P KA
Sbjct: 79 EEPKQQQPPPPPAESQSQETKNQSDESSKPSDQPAEKPGPDKA 121
>10_01_0275 -
2904601-2904900,2905083-2905233,2905522-2905598,
2907201-2907390,2908796-2908981,2910521-2910571,
2911476-2911885,2912252-2912509,2912768-2913070
Length = 641
Score = 27.9 bits (59), Expect = 9.1
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = -1
Query: 124 FLRCNFLLVDGCVCHCCKV 68
F RC FLL C+ +CCK+
Sbjct: 423 FGRCCFLLKSVCLANCCKI 441
>08_02_1088 + 24247781-24249043
Length = 420
Score = 27.9 bits (59), Expect = 9.1
Identities = 14/50 (28%), Positives = 22/50 (44%)
Frame = +2
Query: 89 AAVDKKEVAPEEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDS 238
A V KK A + KESP + + +S + GT+ A ++S
Sbjct: 260 ATVTKKSTAGKTGKKVAAKESPASHKTSMEAATKKSTANKTGTETAAKES 309
>08_02_0633 + 19540584-19541383,19541557-19541610,19542123-19542444
Length = 391
Score = 27.9 bits (59), Expect = 9.1
Identities = 14/47 (29%), Positives = 22/47 (46%)
Frame = -2
Query: 246 SAGESSGASSVPFSLPLLSAASTFLAGDFLTGDSFGSVEVTSSGATS 106
S ++P + PL++AAS+ D G G E +SS A +
Sbjct: 192 SRSRGGAGRAMPINAPLVAAASSSSGSDHSGGGDDGGSETSSSSAAA 238
>03_03_0210 +
15470680-15470715,15473088-15473342,15473417-15473499,
15473617-15473698,15474886-15474939
Length = 169
Score = 27.9 bits (59), Expect = 9.1
Identities = 17/47 (36%), Positives = 25/47 (53%)
Frame = +2
Query: 92 AVDKKEVAPEEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPE 232
A + K + E S P+E+PV+K+ K + AES N DE P+
Sbjct: 2 AAEAKAPSLAEEYSLPPQEAPVEKAVEDKPQEAESISVTN--DETPQ 46
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,113,658
Number of Sequences: 37544
Number of extensions: 322881
Number of successful extensions: 1154
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 1072
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1149
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1980691104
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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