Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= psV30500.Seq
(748 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X97999-1|CAA66636.1| 349|Homo sapiens transcription factor IID ... 58 3e-08
U18062-1|AAB60347.1| 349|Homo sapiens TFIID subunit TAFII55 pro... 58 3e-08
BC032737-1|AAH32737.1| 349|Homo sapiens TAF7 RNA polymerase II,... 58 3e-08
AF349038-1|AAK30585.1| 349|Homo sapiens TFIID subunit TAFII55 p... 58 3e-08
Z68331-4|CAI42017.1| 462|Homo sapiens TAF7-like RNA polymerase ... 40 0.009
Z68331-2|CAI42014.1| 302|Homo sapiens TAF7-like RNA polymerase ... 40 0.009
Z68331-1|CAI42015.1| 376|Homo sapiens TAF7-like RNA polymerase ... 40 0.009
BC043391-1|AAH43391.1| 462|Homo sapiens TAF7-like RNA polymeras... 40 0.009
AL109801-3|CAI43036.1| 462|Homo sapiens TAF7-like RNA polymeras... 40 0.009
AL109801-2|CAI43034.1| 302|Homo sapiens TAF7-like RNA polymeras... 40 0.009
AL109801-1|CAI43035.1| 376|Homo sapiens TAF7-like RNA polymeras... 40 0.009
AK026810-1|BAB15560.1| 302|Homo sapiens protein ( Homo sapiens ... 40 0.009
AF285595-1|AAK31974.1| 374|Homo sapiens TBP-associated factor I... 40 0.009
BC012003-1|AAH12003.1| 365|Homo sapiens CEP135 protein protein. 33 1.1
BX248088-15|CAI41792.1| 673|Homo sapiens kinesin family member ... 32 2.5
BX088650-3|CAM26294.1| 673|Homo sapiens kinesin family member C... 32 2.5
BC121042-1|AAI21043.1| 673|Homo sapiens kinesin family member C... 32 2.5
BC121041-1|AAI21042.1| 673|Homo sapiens kinesin family member C... 32 2.5
BC098438-1|AAH98438.1| 719|Homo sapiens KIFC1 protein protein. 32 2.5
BC073878-1|AAH73878.1| 720|Homo sapiens KIFC1 protein protein. 32 2.5
BC063567-1|AAH63567.1| 709|Homo sapiens KIFC1 protein protein. 32 2.5
BC000712-1|AAH00712.2| 725|Homo sapiens KIFC1 protein protein. 32 2.5
AL662799-4|CAI18269.1| 673|Homo sapiens kinesin family member C... 32 2.5
AL050332-5|CAB63782.1| 673|Homo sapiens kinesin family member C... 32 2.5
AL021366-2|CAA16157.1| 673|Homo sapiens cICK0721Q.3 (Kinesin re... 32 2.5
X74929-1|CAA52882.1| 483|Homo sapiens Keratin 8 protein. 31 5.8
X12882-1|CAA31376.1| 279|Homo sapiens cytokeratin 8 (279 AA) pr... 31 5.8
U76549-1|AAB18966.1| 483|Homo sapiens cytokeratin 8 protein. 31 5.8
M34482-1|AAA35763.1| 482|Homo sapiens protein ( Human cytokerat... 31 5.8
BC075839-1|AAH75839.1| 483|Homo sapiens keratin 8 protein. 31 5.8
BC073760-1|AAH73760.1| 483|Homo sapiens keratin 8 protein. 31 5.8
BC063513-1|AAH63513.2| 483|Homo sapiens keratin 8 protein. 31 5.8
BC051334-1|AAH51334.1| 270|Homo sapiens coiled-coil domain cont... 31 5.8
BC011373-1|AAH11373.2| 365|Homo sapiens KRT8 protein protein. 31 5.8
BC008200-1|AAH08200.1| 279|Homo sapiens KRT8 protein protein. 31 5.8
BC000654-1|AAH00654.3| 483|Homo sapiens keratin 8 protein. 31 5.8
AL355355-2|CAI16546.1| 270|Homo sapiens novel protein protein. 31 5.8
AL355355-1|CAI16545.1| 145|Homo sapiens novel protein protein. 31 5.8
AL353586-2|CAH72784.1| 270|Homo sapiens novel protein protein. 31 5.8
AL353586-1|CAH72783.1| 145|Homo sapiens novel protein protein. 31 5.8
AK222941-1|BAD96661.1| 483|Homo sapiens keratin 8 variant protein. 31 5.8
U51240-1|AAB08975.1| 262|Homo sapiens lysosomal-associated mult... 30 7.7
U30498-1|AAA74018.1| 262|Homo sapiens E3 protein protein. 30 7.7
D42042-1|BAA07643.1| 269|Homo sapiens KIAA0085 protein. 30 7.7
BC106897-1|AAI06898.1| 262|Homo sapiens lysosomal associated mu... 30 7.7
BC106896-1|AAI06897.1| 262|Homo sapiens lysosomal associated mu... 30 7.7
AL137857-1|CAI19321.1| 262|Homo sapiens lysosomal associated mu... 30 7.7
AL137027-1|CAI19267.1| 262|Homo sapiens lysosomal associated mu... 30 7.7
>X97999-1|CAA66636.1| 349|Homo sapiens transcription factor IID
protein.
Length = 349
Score = 58.0 bits (134), Expect = 3e-08
Identities = 31/67 (46%), Positives = 45/67 (67%), Gaps = 1/67 (1%)
Frame = +1
Query: 514 KRELEYPAELESQFILKLPEHPAKILRELLKSGE-NLKNRLTIQIDNDMRRGEVRLDHWL 690
K + + P ELESQFIL+LP A +R ++SG NLK+RLTI++ D R G VR+D
Sbjct: 3 KSKDDAPHELESQFILRLPPEYASTVRRAVQSGHVNLKDRLTIELHPDGRHGIVRVDRVP 62
Query: 691 MHAKIID 711
+ +K++D
Sbjct: 63 LASKLVD 69
>U18062-1|AAB60347.1| 349|Homo sapiens TFIID subunit TAFII55
protein.
Length = 349
Score = 58.0 bits (134), Expect = 3e-08
Identities = 31/67 (46%), Positives = 45/67 (67%), Gaps = 1/67 (1%)
Frame = +1
Query: 514 KRELEYPAELESQFILKLPEHPAKILRELLKSGE-NLKNRLTIQIDNDMRRGEVRLDHWL 690
K + + P ELESQFIL+LP A +R ++SG NLK+RLTI++ D R G VR+D
Sbjct: 3 KSKDDAPHELESQFILRLPPEYASTVRRAVQSGHVNLKDRLTIELHPDGRHGIVRVDRVP 62
Query: 691 MHAKIID 711
+ +K++D
Sbjct: 63 LASKLVD 69
>BC032737-1|AAH32737.1| 349|Homo sapiens TAF7 RNA polymerase II,
TATA box binding protein (TBP)-associated factor, 55kDa
protein.
Length = 349
Score = 58.0 bits (134), Expect = 3e-08
Identities = 31/67 (46%), Positives = 45/67 (67%), Gaps = 1/67 (1%)
Frame = +1
Query: 514 KRELEYPAELESQFILKLPEHPAKILRELLKSGE-NLKNRLTIQIDNDMRRGEVRLDHWL 690
K + + P ELESQFIL+LP A +R ++SG NLK+RLTI++ D R G VR+D
Sbjct: 3 KSKDDAPHELESQFILRLPPEYASTVRRAVQSGHVNLKDRLTIELHPDGRHGIVRVDRVP 62
Query: 691 MHAKIID 711
+ +K++D
Sbjct: 63 LASKLVD 69
>AF349038-1|AAK30585.1| 349|Homo sapiens TFIID subunit TAFII55
protein.
Length = 349
Score = 58.0 bits (134), Expect = 3e-08
Identities = 31/67 (46%), Positives = 45/67 (67%), Gaps = 1/67 (1%)
Frame = +1
Query: 514 KRELEYPAELESQFILKLPEHPAKILRELLKSGE-NLKNRLTIQIDNDMRRGEVRLDHWL 690
K + + P ELESQFIL+LP A +R ++SG NLK+RLTI++ D R G VR+D
Sbjct: 3 KSKDDAPHELESQFILRLPPEYASTVRRAVQSGHVNLKDRLTIELHPDGRHGIVRVDRVP 62
Query: 691 MHAKIID 711
+ +K++D
Sbjct: 63 LASKLVD 69
>Z68331-4|CAI42017.1| 462|Homo sapiens TAF7-like RNA polymerase II,
TATA box binding protein (TBP)-associated factor,
protein.
Length = 462
Score = 39.9 bits (89), Expect = 0.009
Identities = 23/63 (36%), Positives = 37/63 (58%), Gaps = 1/63 (1%)
Frame = +1
Query: 526 EYPAELESQFILKLPEHPAKILRELLKS-GENLKNRLTIQIDNDMRRGEVRLDHWLMHAK 702
E P E+E+QFIL+LP A +R L +S +K++L I + D R V ++ + AK
Sbjct: 93 EVPDEVENQFILRLPLEHACTVRNLARSQSVKMKDKLKIDLLPDGRHAVVEVEDVPLAAK 152
Query: 703 IID 711
++D
Sbjct: 153 LVD 155
>Z68331-2|CAI42014.1| 302|Homo sapiens TAF7-like RNA polymerase II,
TATA box binding protein (TBP)-associated factor,
protein.
Length = 302
Score = 39.9 bits (89), Expect = 0.009
Identities = 23/63 (36%), Positives = 37/63 (58%), Gaps = 1/63 (1%)
Frame = +1
Query: 526 EYPAELESQFILKLPEHPAKILRELLKS-GENLKNRLTIQIDNDMRRGEVRLDHWLMHAK 702
E P E+E+QFIL+LP A +R L +S +K++L I + D R V ++ + AK
Sbjct: 7 EVPDEVENQFILRLPLEHACTVRNLARSQSVKMKDKLKIDLLPDGRHAVVEVEDVPLAAK 66
Query: 703 IID 711
++D
Sbjct: 67 LVD 69
>Z68331-1|CAI42015.1| 376|Homo sapiens TAF7-like RNA polymerase II,
TATA box binding protein (TBP)-associated factor,
protein.
Length = 376
Score = 39.9 bits (89), Expect = 0.009
Identities = 23/63 (36%), Positives = 37/63 (58%), Gaps = 1/63 (1%)
Frame = +1
Query: 526 EYPAELESQFILKLPEHPAKILRELLKS-GENLKNRLTIQIDNDMRRGEVRLDHWLMHAK 702
E P E+E+QFIL+LP A +R L +S +K++L I + D R V ++ + AK
Sbjct: 7 EVPDEVENQFILRLPLEHACTVRNLARSQSVKMKDKLKIDLLPDGRHAVVEVEDVPLAAK 66
Query: 703 IID 711
++D
Sbjct: 67 LVD 69
>BC043391-1|AAH43391.1| 462|Homo sapiens TAF7-like RNA polymerase
II, TATA box binding protein (TBP)-associated factor,
protein.
Length = 462
Score = 39.9 bits (89), Expect = 0.009
Identities = 23/63 (36%), Positives = 37/63 (58%), Gaps = 1/63 (1%)
Frame = +1
Query: 526 EYPAELESQFILKLPEHPAKILRELLKS-GENLKNRLTIQIDNDMRRGEVRLDHWLMHAK 702
E P E+E+QFIL+LP A +R L +S +K++L I + D R V ++ + AK
Sbjct: 93 EVPDEVENQFILRLPLEHACTVRNLARSQSVKMKDKLKIDLLPDGRHAVVEVEDVPLAAK 152
Query: 703 IID 711
++D
Sbjct: 153 LVD 155
>AL109801-3|CAI43036.1| 462|Homo sapiens TAF7-like RNA polymerase
II, TATA box binding protein (TBP)-associated factor,
protein.
Length = 462
Score = 39.9 bits (89), Expect = 0.009
Identities = 23/63 (36%), Positives = 37/63 (58%), Gaps = 1/63 (1%)
Frame = +1
Query: 526 EYPAELESQFILKLPEHPAKILRELLKS-GENLKNRLTIQIDNDMRRGEVRLDHWLMHAK 702
E P E+E+QFIL+LP A +R L +S +K++L I + D R V ++ + AK
Sbjct: 93 EVPDEVENQFILRLPLEHACTVRNLARSQSVKMKDKLKIDLLPDGRHAVVEVEDVPLAAK 152
Query: 703 IID 711
++D
Sbjct: 153 LVD 155
>AL109801-2|CAI43034.1| 302|Homo sapiens TAF7-like RNA polymerase
II, TATA box binding protein (TBP)-associated factor,
protein.
Length = 302
Score = 39.9 bits (89), Expect = 0.009
Identities = 23/63 (36%), Positives = 37/63 (58%), Gaps = 1/63 (1%)
Frame = +1
Query: 526 EYPAELESQFILKLPEHPAKILRELLKS-GENLKNRLTIQIDNDMRRGEVRLDHWLMHAK 702
E P E+E+QFIL+LP A +R L +S +K++L I + D R V ++ + AK
Sbjct: 7 EVPDEVENQFILRLPLEHACTVRNLARSQSVKMKDKLKIDLLPDGRHAVVEVEDVPLAAK 66
Query: 703 IID 711
++D
Sbjct: 67 LVD 69
>AL109801-1|CAI43035.1| 376|Homo sapiens TAF7-like RNA polymerase
II, TATA box binding protein (TBP)-associated factor,
protein.
Length = 376
Score = 39.9 bits (89), Expect = 0.009
Identities = 23/63 (36%), Positives = 37/63 (58%), Gaps = 1/63 (1%)
Frame = +1
Query: 526 EYPAELESQFILKLPEHPAKILRELLKS-GENLKNRLTIQIDNDMRRGEVRLDHWLMHAK 702
E P E+E+QFIL+LP A +R L +S +K++L I + D R V ++ + AK
Sbjct: 7 EVPDEVENQFILRLPLEHACTVRNLARSQSVKMKDKLKIDLLPDGRHAVVEVEDVPLAAK 66
Query: 703 IID 711
++D
Sbjct: 67 LVD 69
>AK026810-1|BAB15560.1| 302|Homo sapiens protein ( Homo sapiens
cDNA: FLJ23157 fis, clone LNG09620. ).
Length = 302
Score = 39.9 bits (89), Expect = 0.009
Identities = 23/63 (36%), Positives = 37/63 (58%), Gaps = 1/63 (1%)
Frame = +1
Query: 526 EYPAELESQFILKLPEHPAKILRELLKS-GENLKNRLTIQIDNDMRRGEVRLDHWLMHAK 702
E P E+E+QFIL+LP A +R L +S +K++L I + D R V ++ + AK
Sbjct: 7 EVPDEVENQFILRLPLEHACTVRNLARSQSVKMKDKLKIDLLPDGRHAVVEVEDVPLAAK 66
Query: 703 IID 711
++D
Sbjct: 67 LVD 69
>AF285595-1|AAK31974.1| 374|Homo sapiens TBP-associated factor II Q
protein.
Length = 374
Score = 39.9 bits (89), Expect = 0.009
Identities = 23/63 (36%), Positives = 37/63 (58%), Gaps = 1/63 (1%)
Frame = +1
Query: 526 EYPAELESQFILKLPEHPAKILRELLKS-GENLKNRLTIQIDNDMRRGEVRLDHWLMHAK 702
E P E+E+QFIL+LP A +R L +S +K++L I + D R V ++ + AK
Sbjct: 7 EVPDEVENQFILRLPLEHACTVRNLARSQSVKMKDKLKIDLLPDGRHAVVEVEDVPLAAK 66
Query: 703 IID 711
++D
Sbjct: 67 LVD 69
>BC012003-1|AAH12003.1| 365|Homo sapiens CEP135 protein protein.
Length = 365
Score = 33.1 bits (72), Expect = 1.1
Identities = 19/59 (32%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Frame = -3
Query: 191 RDFKLAIEDKEKRIKFLEAALLKTQT-DLSKLQSRTATIEKISRDLNIEIHEIPESRNE 18
RD+ IE +E+ I+ L AL ++ D+ L+SR T EK+ LNI++ + ++ +
Sbjct: 21 RDYSKQIELREREIERLSVALDGGRSPDVLSLESRNKTNEKLIAHLNIQVDFLQQANKD 79
>BX248088-15|CAI41792.1| 673|Homo sapiens kinesin family member C1
protein.
Length = 673
Score = 31.9 bits (69), Expect = 2.5
Identities = 15/58 (25%), Positives = 30/58 (51%)
Frame = -3
Query: 197 EQRDFKLAIEDKEKRIKFLEAALLKTQTDLSKLQSRTATIEKISRDLNIEIHEIPESR 24
E+R +E+KE+R++ EAAL +Q +++ L+ T + + +H + R
Sbjct: 240 ERRGLMSQLEEKERRLQTSEAALSSSQAEVASLRQETVAQAALLTEREERLHGLEMER 297
>BX088650-3|CAM26294.1| 673|Homo sapiens kinesin family member C1
protein.
Length = 673
Score = 31.9 bits (69), Expect = 2.5
Identities = 15/58 (25%), Positives = 30/58 (51%)
Frame = -3
Query: 197 EQRDFKLAIEDKEKRIKFLEAALLKTQTDLSKLQSRTATIEKISRDLNIEIHEIPESR 24
E+R +E+KE+R++ EAAL +Q +++ L+ T + + +H + R
Sbjct: 240 ERRGLMSQLEEKERRLQTSEAALSSSQAEVASLRQETVAQAALLTEREERLHGLEMER 297
>BC121042-1|AAI21043.1| 673|Homo sapiens kinesin family member C1
protein.
Length = 673
Score = 31.9 bits (69), Expect = 2.5
Identities = 15/58 (25%), Positives = 30/58 (51%)
Frame = -3
Query: 197 EQRDFKLAIEDKEKRIKFLEAALLKTQTDLSKLQSRTATIEKISRDLNIEIHEIPESR 24
E+R +E+KE+R++ EAAL +Q +++ L+ T + + +H + R
Sbjct: 240 ERRGLMSQLEEKERRLQTSEAALSSSQAEVASLRQETVAQAALLTEREERLHGLEMER 297
>BC121041-1|AAI21042.1| 673|Homo sapiens kinesin family member C1
protein.
Length = 673
Score = 31.9 bits (69), Expect = 2.5
Identities = 15/58 (25%), Positives = 30/58 (51%)
Frame = -3
Query: 197 EQRDFKLAIEDKEKRIKFLEAALLKTQTDLSKLQSRTATIEKISRDLNIEIHEIPESR 24
E+R +E+KE+R++ EAAL +Q +++ L+ T + + +H + R
Sbjct: 240 ERRGLMSQLEEKERRLQTSEAALSSSQAEVASLRQETVAQAALLTEREERLHGLEMER 297
>BC098438-1|AAH98438.1| 719|Homo sapiens KIFC1 protein protein.
Length = 719
Score = 31.9 bits (69), Expect = 2.5
Identities = 15/58 (25%), Positives = 30/58 (51%)
Frame = -3
Query: 197 EQRDFKLAIEDKEKRIKFLEAALLKTQTDLSKLQSRTATIEKISRDLNIEIHEIPESR 24
E+R +E+KE+R++ EAAL +Q +++ L+ T + + +H + R
Sbjct: 286 ERRGLMSQLEEKERRLQTSEAALSSSQAEVASLRQETVAQAALLTEREERLHGLEMER 343
>BC073878-1|AAH73878.1| 720|Homo sapiens KIFC1 protein protein.
Length = 720
Score = 31.9 bits (69), Expect = 2.5
Identities = 15/58 (25%), Positives = 30/58 (51%)
Frame = -3
Query: 197 EQRDFKLAIEDKEKRIKFLEAALLKTQTDLSKLQSRTATIEKISRDLNIEIHEIPESR 24
E+R +E+KE+R++ EAAL +Q +++ L+ T + + +H + R
Sbjct: 287 ERRGLMSQLEEKERRLQTSEAALSSSQAEVASLRQETVAQAALLTEREERLHGLEMER 344
>BC063567-1|AAH63567.1| 709|Homo sapiens KIFC1 protein protein.
Length = 709
Score = 31.9 bits (69), Expect = 2.5
Identities = 15/58 (25%), Positives = 30/58 (51%)
Frame = -3
Query: 197 EQRDFKLAIEDKEKRIKFLEAALLKTQTDLSKLQSRTATIEKISRDLNIEIHEIPESR 24
E+R +E+KE+R++ EAAL +Q +++ L+ T + + +H + R
Sbjct: 276 ERRGLMSQLEEKERRLQTSEAALSSSQAEVASLRQETVAQAALLTEREERLHGLEMER 333
>BC000712-1|AAH00712.2| 725|Homo sapiens KIFC1 protein protein.
Length = 725
Score = 31.9 bits (69), Expect = 2.5
Identities = 15/58 (25%), Positives = 30/58 (51%)
Frame = -3
Query: 197 EQRDFKLAIEDKEKRIKFLEAALLKTQTDLSKLQSRTATIEKISRDLNIEIHEIPESR 24
E+R +E+KE+R++ EAAL +Q +++ L+ T + + +H + R
Sbjct: 292 ERRGLMSQLEEKERRLQTSEAALSSSQAEVASLRQETVAQAALLTEREERLHGLEMER 349
>AL662799-4|CAI18269.1| 673|Homo sapiens kinesin family member C1
protein.
Length = 673
Score = 31.9 bits (69), Expect = 2.5
Identities = 15/58 (25%), Positives = 30/58 (51%)
Frame = -3
Query: 197 EQRDFKLAIEDKEKRIKFLEAALLKTQTDLSKLQSRTATIEKISRDLNIEIHEIPESR 24
E+R +E+KE+R++ EAAL +Q +++ L+ T + + +H + R
Sbjct: 240 ERRGLMSQLEEKERRLQTSEAALSSSQAEVASLRQETVAQAALLTEREERLHGLEMER 297
>AL050332-5|CAB63782.1| 673|Homo sapiens kinesin family member C1
protein.
Length = 673
Score = 31.9 bits (69), Expect = 2.5
Identities = 15/58 (25%), Positives = 30/58 (51%)
Frame = -3
Query: 197 EQRDFKLAIEDKEKRIKFLEAALLKTQTDLSKLQSRTATIEKISRDLNIEIHEIPESR 24
E+R +E+KE+R++ EAAL +Q +++ L+ T + + +H + R
Sbjct: 240 ERRGLMSQLEEKERRLQTSEAALSSSQAEVASLRQETVAQAALLTEREERLHGLEMER 297
>AL021366-2|CAA16157.1| 673|Homo sapiens cICK0721Q.3 (Kinesin
related protein) protein.
Length = 673
Score = 31.9 bits (69), Expect = 2.5
Identities = 15/58 (25%), Positives = 30/58 (51%)
Frame = -3
Query: 197 EQRDFKLAIEDKEKRIKFLEAALLKTQTDLSKLQSRTATIEKISRDLNIEIHEIPESR 24
E+R +E+KE+R++ EAAL +Q +++ L+ T + + +H + R
Sbjct: 240 ERRGLMSQLEEKERRLQTSEAALSSSQAEVASLRQETVAQAALLTEREERLHGLEMER 297
>X74929-1|CAA52882.1| 483|Homo sapiens Keratin 8 protein.
Length = 483
Score = 30.7 bits (66), Expect = 5.8
Identities = 18/52 (34%), Positives = 30/52 (57%)
Frame = -3
Query: 200 AEQRDFKLAIEDKEKRIKFLEAALLKTQTDLSKLQSRTATIEKISRDLNIEI 45
AEQR +LAI+D ++ LEAAL + + D+++ + + L+IEI
Sbjct: 338 AEQRG-ELAIKDANAKLSELEAALQRAKQDMARQLREYQELMNVKLALDIEI 388
>X12882-1|CAA31376.1| 279|Homo sapiens cytokeratin 8 (279 AA)
protein.
Length = 279
Score = 30.7 bits (66), Expect = 5.8
Identities = 18/52 (34%), Positives = 30/52 (57%)
Frame = -3
Query: 200 AEQRDFKLAIEDKEKRIKFLEAALLKTQTDLSKLQSRTATIEKISRDLNIEI 45
AEQR +LAI+D ++ LEAAL + + D+++ + + L+IEI
Sbjct: 134 AEQRG-ELAIKDANAKLSELEAALQRAKQDMARQLREYQELMNVKLALDIEI 184
>U76549-1|AAB18966.1| 483|Homo sapiens cytokeratin 8 protein.
Length = 483
Score = 30.7 bits (66), Expect = 5.8
Identities = 18/52 (34%), Positives = 30/52 (57%)
Frame = -3
Query: 200 AEQRDFKLAIEDKEKRIKFLEAALLKTQTDLSKLQSRTATIEKISRDLNIEI 45
AEQR +LAI+D ++ LEAAL + + D+++ + + L+IEI
Sbjct: 338 AEQRG-ELAIKDANAKLSELEAALQRAKQDMARQLREYQELMNVKLALDIEI 388
>M34482-1|AAA35763.1| 482|Homo sapiens protein ( Human cytokeratin
8 (CK8) gene, complete cds. ).
Length = 482
Score = 30.7 bits (66), Expect = 5.8
Identities = 18/52 (34%), Positives = 30/52 (57%)
Frame = -3
Query: 200 AEQRDFKLAIEDKEKRIKFLEAALLKTQTDLSKLQSRTATIEKISRDLNIEI 45
AEQR +LAI+D ++ LEAAL + + D+++ + + L+IEI
Sbjct: 338 AEQRG-ELAIKDANAKLSELEAALQRAKQDMARQLREYQELMNVKLALDIEI 388
>BC075839-1|AAH75839.1| 483|Homo sapiens keratin 8 protein.
Length = 483
Score = 30.7 bits (66), Expect = 5.8
Identities = 18/52 (34%), Positives = 30/52 (57%)
Frame = -3
Query: 200 AEQRDFKLAIEDKEKRIKFLEAALLKTQTDLSKLQSRTATIEKISRDLNIEI 45
AEQR +LAI+D ++ LEAAL + + D+++ + + L+IEI
Sbjct: 338 AEQRG-ELAIKDANAKLSELEAALQRAKQDMARQLREYQELMNVKLALDIEI 388
>BC073760-1|AAH73760.1| 483|Homo sapiens keratin 8 protein.
Length = 483
Score = 30.7 bits (66), Expect = 5.8
Identities = 18/52 (34%), Positives = 30/52 (57%)
Frame = -3
Query: 200 AEQRDFKLAIEDKEKRIKFLEAALLKTQTDLSKLQSRTATIEKISRDLNIEI 45
AEQR +LAI+D ++ LEAAL + + D+++ + + L+IEI
Sbjct: 338 AEQRG-ELAIKDANAKLSELEAALQRAKQDMARQLREYQELMNVKLALDIEI 388
>BC063513-1|AAH63513.2| 483|Homo sapiens keratin 8 protein.
Length = 483
Score = 30.7 bits (66), Expect = 5.8
Identities = 18/52 (34%), Positives = 30/52 (57%)
Frame = -3
Query: 200 AEQRDFKLAIEDKEKRIKFLEAALLKTQTDLSKLQSRTATIEKISRDLNIEI 45
AEQR +LAI+D ++ LEAAL + + D+++ + + L+IEI
Sbjct: 338 AEQRG-ELAIKDANAKLSELEAALQRAKQDMARQLREYQELMNVKLALDIEI 388
>BC051334-1|AAH51334.1| 270|Homo sapiens coiled-coil domain
containing 3 protein.
Length = 270
Score = 30.7 bits (66), Expect = 5.8
Identities = 14/48 (29%), Positives = 25/48 (52%)
Frame = -3
Query: 170 EDKEKRIKFLEAALLKTQTDLSKLQSRTATIEKISRDLNIEIHEIPES 27
ED ++ AL + + + KLQ + AT+EK +R L + ++ S
Sbjct: 180 EDSRLMCSSVQKALFEEEDHVKKLQQKVATLEKRNRQLRERVKKVKRS 227
>BC011373-1|AAH11373.2| 365|Homo sapiens KRT8 protein protein.
Length = 365
Score = 30.7 bits (66), Expect = 5.8
Identities = 18/52 (34%), Positives = 30/52 (57%)
Frame = -3
Query: 200 AEQRDFKLAIEDKEKRIKFLEAALLKTQTDLSKLQSRTATIEKISRDLNIEI 45
AEQR +LAI+D ++ LEAAL + + D+++ + + L+IEI
Sbjct: 220 AEQRG-ELAIKDANAKLSELEAALQRAKQDMARQLREYQELMNVKLALDIEI 270
>BC008200-1|AAH08200.1| 279|Homo sapiens KRT8 protein protein.
Length = 279
Score = 30.7 bits (66), Expect = 5.8
Identities = 18/52 (34%), Positives = 30/52 (57%)
Frame = -3
Query: 200 AEQRDFKLAIEDKEKRIKFLEAALLKTQTDLSKLQSRTATIEKISRDLNIEI 45
AEQR +LAI+D ++ LEAAL + + D+++ + + L+IEI
Sbjct: 134 AEQRG-ELAIKDANAKLSELEAALQRAKQDMARQLREYQELMNVKLALDIEI 184
>BC000654-1|AAH00654.3| 483|Homo sapiens keratin 8 protein.
Length = 483
Score = 30.7 bits (66), Expect = 5.8
Identities = 18/52 (34%), Positives = 30/52 (57%)
Frame = -3
Query: 200 AEQRDFKLAIEDKEKRIKFLEAALLKTQTDLSKLQSRTATIEKISRDLNIEI 45
AEQR +LAI+D ++ LEAAL + + D+++ + + L+IEI
Sbjct: 338 AEQRG-ELAIKDANAKLSELEAALQRAKQDMARQLREYQELMNVKLALDIEI 388
>AL355355-2|CAI16546.1| 270|Homo sapiens novel protein protein.
Length = 270
Score = 30.7 bits (66), Expect = 5.8
Identities = 14/48 (29%), Positives = 25/48 (52%)
Frame = -3
Query: 170 EDKEKRIKFLEAALLKTQTDLSKLQSRTATIEKISRDLNIEIHEIPES 27
ED ++ AL + + + KLQ + AT+EK +R L + ++ S
Sbjct: 180 EDSRLMCSSVQKALFEEEDHVKKLQQKVATLEKRNRQLRERVKKVKRS 227
>AL355355-1|CAI16545.1| 145|Homo sapiens novel protein protein.
Length = 145
Score = 30.7 bits (66), Expect = 5.8
Identities = 14/48 (29%), Positives = 25/48 (52%)
Frame = -3
Query: 170 EDKEKRIKFLEAALLKTQTDLSKLQSRTATIEKISRDLNIEIHEIPES 27
ED ++ AL + + + KLQ + AT+EK +R L + ++ S
Sbjct: 55 EDSRLMCSSVQKALFEEEDHVKKLQQKVATLEKRNRQLRERVKKVKRS 102
>AL353586-2|CAH72784.1| 270|Homo sapiens novel protein protein.
Length = 270
Score = 30.7 bits (66), Expect = 5.8
Identities = 14/48 (29%), Positives = 25/48 (52%)
Frame = -3
Query: 170 EDKEKRIKFLEAALLKTQTDLSKLQSRTATIEKISRDLNIEIHEIPES 27
ED ++ AL + + + KLQ + AT+EK +R L + ++ S
Sbjct: 180 EDSRLMCSSVQKALFEEEDHVKKLQQKVATLEKRNRQLRERVKKVKRS 227
>AL353586-1|CAH72783.1| 145|Homo sapiens novel protein protein.
Length = 145
Score = 30.7 bits (66), Expect = 5.8
Identities = 14/48 (29%), Positives = 25/48 (52%)
Frame = -3
Query: 170 EDKEKRIKFLEAALLKTQTDLSKLQSRTATIEKISRDLNIEIHEIPES 27
ED ++ AL + + + KLQ + AT+EK +R L + ++ S
Sbjct: 55 EDSRLMCSSVQKALFEEEDHVKKLQQKVATLEKRNRQLRERVKKVKRS 102
>AK222941-1|BAD96661.1| 483|Homo sapiens keratin 8 variant protein.
Length = 483
Score = 30.7 bits (66), Expect = 5.8
Identities = 18/52 (34%), Positives = 30/52 (57%)
Frame = -3
Query: 200 AEQRDFKLAIEDKEKRIKFLEAALLKTQTDLSKLQSRTATIEKISRDLNIEI 45
AEQR +LAI+D ++ LEAAL + + D+++ + + L+IEI
Sbjct: 338 AEQRG-ELAIKDANAKLSELEAALQRAKQDMARQLREYQELMNVKLALDIEI 388
>U51240-1|AAB08975.1| 262|Homo sapiens lysosomal-associated
multitransmembrane protein protein.
Length = 262
Score = 30.3 bits (65), Expect = 7.7
Identities = 21/73 (28%), Positives = 36/73 (49%), Gaps = 1/73 (1%)
Frame = +1
Query: 70 IFSIVAVRLCSLERSV*VLRSAASRNLIRFSLSSIANL-KSLCSAVMKSVVLKGLSYQVI 246
I+ ++ L +E SV V AS L + IA+L S M ++ L V+
Sbjct: 26 IYHVIMSVLLFIEHSVEVAHGKASCKLSQMGYLRIADLISSFLLITMLFIISLSLLIGVV 85
Query: 247 KSLKKYVLIFINI 285
K+ +KY+L F+++
Sbjct: 86 KNREKYLLPFLSL 98
>U30498-1|AAA74018.1| 262|Homo sapiens E3 protein protein.
Length = 262
Score = 30.3 bits (65), Expect = 7.7
Identities = 21/73 (28%), Positives = 36/73 (49%), Gaps = 1/73 (1%)
Frame = +1
Query: 70 IFSIVAVRLCSLERSV*VLRSAASRNLIRFSLSSIANL-KSLCSAVMKSVVLKGLSYQVI 246
I+ ++ L +E SV V AS L + IA+L S M ++ L V+
Sbjct: 26 IYHVIMSVLLFIEHSVEVAHGKASCKLSQMGYLRIADLISSFLLITMLFIISLSLLIGVV 85
Query: 247 KSLKKYVLIFINI 285
K+ +KY+L F+++
Sbjct: 86 KNREKYLLPFLSL 98
>D42042-1|BAA07643.1| 269|Homo sapiens KIAA0085 protein.
Length = 269
Score = 30.3 bits (65), Expect = 7.7
Identities = 21/73 (28%), Positives = 36/73 (49%), Gaps = 1/73 (1%)
Frame = +1
Query: 70 IFSIVAVRLCSLERSV*VLRSAASRNLIRFSLSSIANL-KSLCSAVMKSVVLKGLSYQVI 246
I+ ++ L +E SV V AS L + IA+L S M ++ L V+
Sbjct: 33 IYHVIMSVLLFIEHSVEVAHGKASCKLSQMGYLRIADLISSFLLITMLFIISLSLLIGVV 92
Query: 247 KSLKKYVLIFINI 285
K+ +KY+L F+++
Sbjct: 93 KNREKYLLPFLSL 105
>BC106897-1|AAI06898.1| 262|Homo sapiens lysosomal associated
multispanning membrane protein 5 protein.
Length = 262
Score = 30.3 bits (65), Expect = 7.7
Identities = 21/73 (28%), Positives = 36/73 (49%), Gaps = 1/73 (1%)
Frame = +1
Query: 70 IFSIVAVRLCSLERSV*VLRSAASRNLIRFSLSSIANL-KSLCSAVMKSVVLKGLSYQVI 246
I+ ++ L +E SV V AS L + IA+L S M ++ L V+
Sbjct: 26 IYHVIMSVLLFIEHSVEVAHGKASCKLSQMGYLRIADLISSFLLITMLFIISLSLLIGVV 85
Query: 247 KSLKKYVLIFINI 285
K+ +KY+L F+++
Sbjct: 86 KNREKYLLPFLSL 98
>BC106896-1|AAI06897.1| 262|Homo sapiens lysosomal associated
multispanning membrane protein 5 protein.
Length = 262
Score = 30.3 bits (65), Expect = 7.7
Identities = 21/73 (28%), Positives = 36/73 (49%), Gaps = 1/73 (1%)
Frame = +1
Query: 70 IFSIVAVRLCSLERSV*VLRSAASRNLIRFSLSSIANL-KSLCSAVMKSVVLKGLSYQVI 246
I+ ++ L +E SV V AS L + IA+L S M ++ L V+
Sbjct: 26 IYHVIMSVLLFIEHSVEVAHGKASCKLSQMGYLRIADLISSFLLITMLFIISLSLLIGVV 85
Query: 247 KSLKKYVLIFINI 285
K+ +KY+L F+++
Sbjct: 86 KNREKYLLPFLSL 98
>AL137857-1|CAI19321.1| 262|Homo sapiens lysosomal associated
multispanning membrane protein 5 protein.
Length = 262
Score = 30.3 bits (65), Expect = 7.7
Identities = 21/73 (28%), Positives = 36/73 (49%), Gaps = 1/73 (1%)
Frame = +1
Query: 70 IFSIVAVRLCSLERSV*VLRSAASRNLIRFSLSSIANL-KSLCSAVMKSVVLKGLSYQVI 246
I+ ++ L +E SV V AS L + IA+L S M ++ L V+
Sbjct: 26 IYHVIMSVLLFIEHSVEVAHGKASCKLSQMGYLRIADLISSFLLITMLFIISLSLLIGVV 85
Query: 247 KSLKKYVLIFINI 285
K+ +KY+L F+++
Sbjct: 86 KNREKYLLPFLSL 98
>AL137027-1|CAI19267.1| 262|Homo sapiens lysosomal associated
multispanning membrane protein 5 protein.
Length = 262
Score = 30.3 bits (65), Expect = 7.7
Identities = 21/73 (28%), Positives = 36/73 (49%), Gaps = 1/73 (1%)
Frame = +1
Query: 70 IFSIVAVRLCSLERSV*VLRSAASRNLIRFSLSSIANL-KSLCSAVMKSVVLKGLSYQVI 246
I+ ++ L +E SV V AS L + IA+L S M ++ L V+
Sbjct: 26 IYHVIMSVLLFIEHSVEVAHGKASCKLSQMGYLRIADLISSFLLITMLFIISLSLLIGVV 85
Query: 247 KSLKKYVLIFINI 285
K+ +KY+L F+++
Sbjct: 86 KNREKYLLPFLSL 98
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 83,348,718
Number of Sequences: 237096
Number of extensions: 1384463
Number of successful extensions: 2882
Number of sequences better than 10.0: 48
Number of HSP's better than 10.0 without gapping: 2705
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2875
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8959138240
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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