Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= psV30497.Seq
         (698 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY341205-1|AAR13769.1|  285|Anopheles gambiae period protein.          24   4.0  
AY341204-1|AAR13768.1|  285|Anopheles gambiae period protein.          24   4.0  
AY341203-1|AAR13767.1|  285|Anopheles gambiae period protein.          24   4.0  
AY341202-1|AAR13766.1|  285|Anopheles gambiae period protein.          24   4.0  
U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.         23   9.2  
U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.         23   9.2  
AF000953-1|AAB96576.1|  433|Anopheles gambiae carboxypeptidase A...    23   9.2  

>AY341205-1|AAR13769.1|  285|Anopheles gambiae period protein.
          Length = 285

 Score = 24.2 bits (50), Expect = 4.0
 Identities = 12/29 (41%), Positives = 17/29 (58%)
 Frame = +1

Query: 325 SVGDGEXVEFAVVAGEKGFEAAGVTGPGG 411
           ++GD E    AV   ++GF A+G  G GG
Sbjct: 201 TIGD-EQQSHAVSPNQRGFSASGGGGSGG 228


>AY341204-1|AAR13768.1|  285|Anopheles gambiae period protein.
          Length = 285

 Score = 24.2 bits (50), Expect = 4.0
 Identities = 12/29 (41%), Positives = 17/29 (58%)
 Frame = +1

Query: 325 SVGDGEXVEFAVVAGEKGFEAAGVTGPGG 411
           ++GD E    AV   ++GF A+G  G GG
Sbjct: 201 TIGD-EQQSHAVSPNQRGFSASGGGGSGG 228


>AY341203-1|AAR13767.1|  285|Anopheles gambiae period protein.
          Length = 285

 Score = 24.2 bits (50), Expect = 4.0
 Identities = 12/29 (41%), Positives = 17/29 (58%)
 Frame = +1

Query: 325 SVGDGEXVEFAVVAGEKGFEAAGVTGPGG 411
           ++GD E    AV   ++GF A+G  G GG
Sbjct: 201 TIGD-EQQSHAVSPNQRGFSASGGGGSGG 228


>AY341202-1|AAR13766.1|  285|Anopheles gambiae period protein.
          Length = 285

 Score = 24.2 bits (50), Expect = 4.0
 Identities = 12/29 (41%), Positives = 17/29 (58%)
 Frame = +1

Query: 325 SVGDGEXVEFAVVAGEKGFEAAGVTGPGG 411
           ++GD E    AV   ++GF A+G  G GG
Sbjct: 201 TIGD-EQQSHAVSPNQRGFSASGGGGSGG 228


>U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 23.0 bits (47), Expect = 9.2
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = -2

Query: 481 DEGNIGGGSHGAC 443
           +EG  G GSHG C
Sbjct: 349 NEGGTGCGSHGCC 361


>U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 23.0 bits (47), Expect = 9.2
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = -2

Query: 481 DEGNIGGGSHGAC 443
           +EG  G GSHG C
Sbjct: 349 NEGGTGCGSHGCC 361


>AF000953-1|AAB96576.1|  433|Anopheles gambiae carboxypeptidase A
           protein.
          Length = 433

 Score = 23.0 bits (47), Expect = 9.2
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = -3

Query: 423 FYWLTTGTSNTSC 385
           F+W   GTSN +C
Sbjct: 264 FHWAEQGTSNNAC 276


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 561,388
Number of Sequences: 2352
Number of extensions: 8364
Number of successful extensions: 23
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 71086350
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)