Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= psV30495.Seq
         (776 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY071539-1|AAL49161.1|  124|Drosophila melanogaster RE57810p pro...    71   2e-12
AE014296-3496|AAF51690.1|  124|Drosophila melanogaster CG12975-P...    71   2e-12
DQ902587-1|ABI94369.1| 2009|Drosophila melanogaster calmodulin-b...    31   1.3  
AY061208-1|AAL28756.1|  459|Drosophila melanogaster LD15680p pro...    31   1.3  
AE013599-870|AAF58934.2| 1504|Drosophila melanogaster CG8809-PA ...    31   1.3  

>AY071539-1|AAL49161.1|  124|Drosophila melanogaster RE57810p
           protein.
          Length = 124

 Score = 70.5 bits (165), Expect = 2e-12
 Identities = 37/102 (36%), Positives = 52/102 (50%)
 Frame = +2

Query: 260 GYPLAINATDIKVKEVDFNPEFISRVIPKLDWEVLWVAADSIGHSDGLPRSLENKYDENE 439
           G+PL +     +V E +FNP F+ R++PKLDW  ++ AA     ++ +P        ENE
Sbjct: 20  GFPLKLTINKKEVVESEFNPTFVERILPKLDWSAVYGAAQVAELTEDIPAVQPENIVENE 79

Query: 440 EFLKKAHKVLLEXXXXXXPLDLVXNXEDQFPISKGIPNMPXN 565
             L+K H +L E       L+        FPIS GIPNM  N
Sbjct: 80  LLLQKLHHLLFEIDVLEGQLECPETGR-VFPISDGIPNMLLN 120


>AE014296-3496|AAF51690.1|  124|Drosophila melanogaster CG12975-PA
           protein.
          Length = 124

 Score = 70.5 bits (165), Expect = 2e-12
 Identities = 37/102 (36%), Positives = 52/102 (50%)
 Frame = +2

Query: 260 GYPLAINATDIKVKEVDFNPEFISRVIPKLDWEVLWVAADSIGHSDGLPRSLENKYDENE 439
           G+PL +     +V E +FNP F+ R++PKLDW  ++ AA     ++ +P        ENE
Sbjct: 20  GFPLKLTINKKEVVESEFNPTFVERILPKLDWSAVYGAAQVAELTEDIPAVQPENIVENE 79

Query: 440 EFLKKAHKVLLEXXXXXXPLDLVXNXEDQFPISKGIPNMPXN 565
             L+K H +L E       L+        FPIS GIPNM  N
Sbjct: 80  LLLQKLHHLLFEIDVLEGQLECPETGR-VFPISDGIPNMLLN 120


>DQ902587-1|ABI94369.1| 2009|Drosophila melanogaster
            calmodulin-binding transcriptionactivator protein.
          Length = 2009

 Score = 31.5 bits (68), Expect = 1.3
 Identities = 22/64 (34%), Positives = 28/64 (43%)
 Frame = -3

Query: 582  TALQPXXKGILGIPLEIGNWSSXFXTRSRGPPQXPPSNKTL*AFFKNSSFSSYLFSKDLG 403
            ++L P   G L  P    ++S      S   P  PPS K L  F   SS SSY F  D  
Sbjct: 1728 SSLSPASSGPLQSP---ASYSILGTDPSVSSPSPPPSTKQLTEFLHASSISSYPFEADFS 1784

Query: 402  RPSL 391
            + +L
Sbjct: 1785 KLTL 1788


>AY061208-1|AAL28756.1|  459|Drosophila melanogaster LD15680p
           protein.
          Length = 459

 Score = 31.5 bits (68), Expect = 1.3
 Identities = 22/64 (34%), Positives = 28/64 (43%)
 Frame = -3

Query: 582 TALQPXXKGILGIPLEIGNWSSXFXTRSRGPPQXPPSNKTL*AFFKNSSFSSYLFSKDLG 403
           ++L P   G L  P    ++S      S   P  PPS K L  F   SS SSY F  D  
Sbjct: 178 SSLSPASSGPLQSP---ASYSILGTDPSVSSPSPPPSTKQLTEFLHASSISSYPFEADFS 234

Query: 402 RPSL 391
           + +L
Sbjct: 235 KLTL 238


>AE013599-870|AAF58934.2| 1504|Drosophila melanogaster CG8809-PA
            protein.
          Length = 1504

 Score = 31.5 bits (68), Expect = 1.3
 Identities = 22/64 (34%), Positives = 28/64 (43%)
 Frame = -3

Query: 582  TALQPXXKGILGIPLEIGNWSSXFXTRSRGPPQXPPSNKTL*AFFKNSSFSSYLFSKDLG 403
            ++L P   G L  P    ++S      S   P  PPS K L  F   SS SSY F  D  
Sbjct: 1223 SSLSPASSGPLQSP---ASYSILGTDPSVSSPSPPPSTKQLTEFLHASSISSYPFEADFS 1279

Query: 402  RPSL 391
            + +L
Sbjct: 1280 KLTL 1283


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,749,789
Number of Sequences: 53049
Number of extensions: 529423
Number of successful extensions: 1079
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1045
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1077
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3602427675
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)