Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= psV30492.Seq
         (748 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_53416| Best HMM Match : Acetyltransf_1 (HMM E-Value=2.7e-21)        28   9.2  
SB_51927| Best HMM Match : Acetyltransf_1 (HMM E-Value=2.7e-21)        28   9.2  

>SB_53416| Best HMM Match : Acetyltransf_1 (HMM E-Value=2.7e-21)
          Length = 209

 Score = 27.9 bits (59), Expect = 9.2
 Identities = 18/67 (26%), Positives = 35/67 (52%)
 Frame = +1

Query: 4   PKLSLCGLVLSVWGIIQLTLMGVFYYIRAVALLEDLPFDEKNPPHSIEDFVIEVEKGYTL 183
           P L L  LV +V  +  L L+G+   + AV +   L F + +  H++E  + ++ K Y++
Sbjct: 43  PALFLTRLVAAVTSV-WLALIGLGLIVSAVYISYYLKFMQ-HINHALETDLADISKSYSV 100

Query: 184 NAQNCWI 204
              + W+
Sbjct: 101 EKSSFWV 107


>SB_51927| Best HMM Match : Acetyltransf_1 (HMM E-Value=2.7e-21)
          Length = 238

 Score = 27.9 bits (59), Expect = 9.2
 Identities = 18/67 (26%), Positives = 35/67 (52%)
 Frame = +1

Query: 4   PKLSLCGLVLSVWGIIQLTLMGVFYYIRAVALLEDLPFDEKNPPHSIEDFVIEVEKGYTL 183
           P L L  LV +V  +  L L+G+   + AV +   L F + +  H++E  + ++ K Y++
Sbjct: 72  PALFLTRLVAAVTSV-WLALIGLGLIVSAVYISYYLKFMQ-HINHALETDLADISKSYSV 129

Query: 184 NAQNCWI 204
              + W+
Sbjct: 130 EKSSFWV 136


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,219,269
Number of Sequences: 59808
Number of extensions: 427943
Number of successful extensions: 1021
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 992
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1020
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 2022185256
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)