Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= psV30477.Seq
         (696 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U50471-1|AAA93474.1|  135|Anopheles gambiae protein ( Anopheles ...   159   6e-41
AJ973471-1|CAJ01518.1|  122|Anopheles gambiae hypothetical prote...    24   5.3  
AJ697731-1|CAG26924.1|  122|Anopheles gambiae putative chemosens...    24   5.3  
AJ697730-1|CAG26923.1|  122|Anopheles gambiae putative chemosens...    24   5.3  
U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra...    23   9.2  

>U50471-1|AAA93474.1|  135|Anopheles gambiae protein ( Anopheles
           gambiae putativeribosomal protein S8 mRNA, complete cds.
           ).
          Length = 135

 Score =  159 bits (387), Expect = 6e-41
 Identities = 75/130 (57%), Positives = 100/130 (76%)
 Frame = +1

Query: 253 QTRIIDVVYNASNNELVRTKTLVKNAIVVVDATPFRQWYESHYTLPLGRKKGAKLTEAEE 432
           + RIIDVVYNASNNEL+RTKTLVKNAI+V+DA+PFRQWYESHY LPLG+K+  +L   EE
Sbjct: 4   KARIIDVVYNASNNELIRTKTLVKNAIIVIDASPFRQWYESHYLLPLGKKR--ELKAGEE 61

Query: 433 AIINKKRSQKTARKYLARQRLAKVEVL*KSNSTQGVCWACVASRPGQCGRADGLHLRXAK 612
            +++KKR++   RKY+ RQ+ AK++   +     G   AC++SRPGQ GRADG ++   K
Sbjct: 62  DVLSKKRTKSNLRKYVKRQKNAKIDPAVEEQFNAGRLLACISSRPGQVGRADG-YILEGK 120

Query: 613 KLEFYLRXVK 642
           +LEFYL+ +K
Sbjct: 121 ELEFYLKKIK 130


>AJ973471-1|CAJ01518.1|  122|Anopheles gambiae hypothetical protein
           protein.
          Length = 122

 Score = 23.8 bits (49), Expect = 5.3
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -1

Query: 339 YNNCILDKGLCTHQ 298
           Y  C+LDKG CT +
Sbjct: 44  YLKCLLDKGPCTQE 57


>AJ697731-1|CAG26924.1|  122|Anopheles gambiae putative chemosensory
           protein CSP2 protein.
          Length = 122

 Score = 23.8 bits (49), Expect = 5.3
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -1

Query: 339 YNNCILDKGLCTHQ 298
           Y  C+LDKG CT +
Sbjct: 44  YLKCLLDKGPCTQE 57


>AJ697730-1|CAG26923.1|  122|Anopheles gambiae putative chemosensory
           protein CSP1 protein.
          Length = 122

 Score = 23.8 bits (49), Expect = 5.3
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -1

Query: 339 YNNCILDKGLCTHQ 298
           Y  C+LDKG CT +
Sbjct: 44  YLKCLLDKGPCTQE 57


>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 1049

 Score = 23.0 bits (47), Expect = 9.2
 Identities = 9/24 (37%), Positives = 15/24 (62%)
 Frame = +3

Query: 129 LQTPGSALSESTPFVHVVEILSTV 200
           + TP  A++ STPF+    +LS +
Sbjct: 527 VNTPAGAINMSTPFIDSEIVLSAL 550


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 699,545
Number of Sequences: 2352
Number of extensions: 14959
Number of successful extensions: 32
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 70668195
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)