Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= psV30473.Seq
(781 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_04_1370 - 32990002-32990244,32990950-32991943,32992019-329922... 55 6e-08
07_01_0629 - 4695778-4696077,4696242-4696406,4696497-4696673,469... 36 0.036
03_02_0686 + 10407800-10409501,10409611-10410284 35 0.063
03_02_0100 + 5622360-5622524,5622603-5622701,5622979-5623044 32 0.44
07_01_0292 - 2117212-2117326,2117402-2117527,2117654-2117791,211... 31 0.78
06_03_0518 - 21685950-21686221,21686768-21686882 31 0.78
03_05_0799 + 27809301-27811550 31 1.0
10_08_0791 - 20590744-20591211,20591379-20591439,20591525-205915... 31 1.4
10_08_0050 + 14469879-14470072,14470620-14471094 31 1.4
08_02_0823 + 21557111-21557292,21557391-21557473,21557722-215578... 31 1.4
02_04_0028 + 19027510-19027983,19028087-19028278,19028369-190285... 30 1.8
01_01_1008 - 7987936-7988628,7988923-7989102 30 1.8
09_06_0111 - 20924838-20924969,20925147-20925290,20925391-209254... 30 2.4
08_01_0525 + 4564885-4565221,4565337-4565476,4565582-4565677,456... 30 2.4
04_04_0910 - 29321128-29321276,29321977-29322508,29323301-293237... 30 2.4
12_02_0625 - 21331209-21331273,21331364-21331555,21332348-213325... 29 3.1
07_01_0511 + 3806475-3806876,3807914-3808039,3808120-3808193,380... 29 3.1
01_06_0681 - 31150651-31151148,31151427-31151483 29 3.1
05_01_0029 + 187769-188707,188971-189246,189978-190174,190263-19... 29 4.1
10_02_0175 - 6207485-6207898 29 5.5
09_01_0117 + 1808669-1809181,1810038-1810059,1810170-1810223,181... 29 5.5
04_04_1487 - 33919654-33920399,33920676-33920817 29 5.5
04_04_1220 + 31843628-31844755 29 5.5
03_04_0069 - 17022468-17023361 29 5.5
08_01_0619 + 5412058-5413224,5413357-5413476,5413755-5413831,541... 28 7.2
05_05_0227 - 23449579-23450459,23450574-23450691 28 7.2
04_04_0726 + 27588225-27588685,27588768-27588895,27590523-27591016 28 7.2
03_05_0355 - 23420410-23420548,23420643-23420794 28 7.2
02_01_0360 - 2594534-2594601,2594778-2594829,2594915-2595029,259... 28 7.2
01_06_0561 + 30251547-30252173,30252248-30252405,30253250-302541... 28 7.2
01_01_0937 - 7388230-7388283,7388957-7389091,7389201-7389365,738... 28 7.2
10_08_0042 - 14383143-14383628,14383647-14384609,14384697-143864... 28 9.6
10_07_0130 + 13241085-13241151,13241268-13241339,13242458-132428... 28 9.6
05_07_0308 + 29115892-29116083,29116771-29116885,29116978-291170... 28 9.6
05_04_0031 + 17353292-17354353 28 9.6
04_04_0555 - 26210346-26211458,26211530-26211719,26211826-262119... 28 9.6
01_06_0049 - 25953811-25954131,25954223-25954903 28 9.6
01_06_0040 - 25874308-25874611,25875743-25875822,25876764-258769... 28 9.6
>04_04_1370 -
32990002-32990244,32990950-32991943,32992019-32992240,
32993413-32993543
Length = 529
Score = 55.2 bits (127), Expect = 6e-08
Identities = 42/118 (35%), Positives = 61/118 (51%), Gaps = 10/118 (8%)
Frame = -3
Query: 725 FNGLLIRHYWRKDAQGSECAGLSRKDSTSAYCQG-------RAGGRVSPDARRGGRDGCR 567
FNGL +WR DA+G C G++R + + + +S + G G
Sbjct: 367 FNGLFAP-WWRDDARGI-CIGITRFTNKGHIARAVLESMCFQVNDVLSSMHKDAGEAG-E 423
Query: 566 LRAPEATPRRRRDGAELSS---VQMQADLLGIPVIRPLMMESTALGAAIVAGRAMRVW 402
+++ E R DG + +Q+QADLLG PV+RP +E+TALGAA AG A+ VW
Sbjct: 424 VKSAEGEFLLRVDGGATVNNLLMQIQADLLGSPVVRPADIETTALGAAYAAGLAVGVW 481
>07_01_0629 -
4695778-4696077,4696242-4696406,4696497-4696673,
4697157-4697455,4697589-4697751,4697897-4698088,
4698211-4698385,4698527-4698741,4698948-4699385
Length = 707
Score = 35.9 bits (79), Expect = 0.036
Identities = 17/40 (42%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Frame = +1
Query: 490 KSAC-ICTELSSAPSLRRRGVASGARSLQPSRPPRRASGD 606
+ AC + ++ PS RRRG G R P P RR SGD
Sbjct: 15 RPACRVASQCGGRPSTRRRGAGGGPRRAVPQPPVRRPSGD 54
>03_02_0686 + 10407800-10409501,10409611-10410284
Length = 791
Score = 35.1 bits (77), Expect = 0.063
Identities = 17/46 (36%), Positives = 23/46 (50%)
Frame = -3
Query: 701 YWRKDAQGSECAGLSRKDSTSAYCQGRAGGRVSPDARRGGRDGCRL 564
+WRKD Q SE KD+T+ G++GG GG G +L
Sbjct: 419 FWRKDKQESESPKKGAKDATAKAAAGKSGGGGGGSGGAGGDGGGKL 464
>03_02_0100 + 5622360-5622524,5622603-5622701,5622979-5623044
Length = 109
Score = 32.3 bits (70), Expect = 0.44
Identities = 17/63 (26%), Positives = 28/63 (44%)
Frame = -3
Query: 614 GRVSPDARRGGRDGCRLRAPEATPRRRRDGAELSSVQMQADLLGIPVIRPLMMESTALGA 435
GRV PD R GC +R E R R +++S ++Q G ++ + + L
Sbjct: 21 GRVEPDGRAASASGCLMRRSEGRRRPWRHLLKITSEEIQQVQQGFLTVQKFQVSTAILQI 80
Query: 434 AIV 426
I+
Sbjct: 81 III 83
>07_01_0292 -
2117212-2117326,2117402-2117527,2117654-2117791,
2117904-2118323,2118421-2118591,2118701-2118880,
2118988-2119140,2119226-2119384,2119841-2120152,
2120285-2120452,2120851-2121050,2122207-2122589,
2123244-2123625
Length = 968
Score = 31.5 bits (68), Expect = 0.78
Identities = 20/67 (29%), Positives = 29/67 (43%), Gaps = 1/67 (1%)
Frame = +3
Query: 351 GKSRQECIGRWAGYCRGPHTHCA-TCDNGRPQGCTFHHEGTNDWYTQ*ISLHLHRTEFCA 527
G+S EC RW + +H A T + T +G N+W ++L HRT F
Sbjct: 369 GRSGAECESRWLNFDDPLISHNAWTAREEKRLILTVQQQGMNNWINIAVTLGTHRTPFQC 428
Query: 528 IPPSARS 548
+ RS
Sbjct: 429 LVRYQRS 435
>06_03_0518 - 21685950-21686221,21686768-21686882
Length = 128
Score = 31.5 bits (68), Expect = 0.78
Identities = 24/94 (25%), Positives = 35/94 (37%), Gaps = 5/94 (5%)
Frame = +1
Query: 358 AGRNVSAGGLGIVV----GHTRIARPATMAAPRAVLSIMRGRMTGIPSKSACICTELSSA 525
AGR V A G G G RP + + R R G+P E+ S+
Sbjct: 3 AGRRVLAAGAGCACLRASGRPGAVRPRRRELGLGKVDLARRRRQGLPLIITIAFIEMGSS 62
Query: 526 PSLRRRGVASGARSLQPSRP-PRRASGDTRPPAR 624
P++ V + +++ P P G PP R
Sbjct: 63 PTIATATVPTPTTAIRAKSPTPEEMGGRRGPPKR 96
>03_05_0799 + 27809301-27811550
Length = 749
Score = 31.1 bits (67), Expect = 1.0
Identities = 22/76 (28%), Positives = 33/76 (43%)
Frame = +1
Query: 451 LSIMRGRMTGIPSKSACICTELSSAPSLRRRGVASGARSLQPSRPPRRASGDTRPPARP* 630
L + G P SA E+++A L +S + + P PP SG+ PP+
Sbjct: 370 LYVSTGSAVPSPRASATATMEMAAAMGLMPGSPSSVSAVMSPFTPPMSPSGNGMPPSLGW 429
Query: 631 QYADVESFRLKPAHSL 678
Q +V + L P SL
Sbjct: 430 QQPNVPTLHL-PGSSL 444
>10_08_0791 -
20590744-20591211,20591379-20591439,20591525-20591592,
20592015-20592188,20592291-20592331,20592571-20592620,
20593083-20593171,20593250-20593324,20593631-20593719,
20593895-20593955,20594111-20594227,20594465-20594667,
20594785-20594842,20594951-20595103
Length = 568
Score = 30.7 bits (66), Expect = 1.4
Identities = 23/68 (33%), Positives = 28/68 (41%)
Frame = +1
Query: 475 TGIPSKSACICTELSSAPSLRRRGVASGARSLQPSRPPRRASGDTRPPARP*QYADVESF 654
TG S S C T+ A R + RSL R R D+ P P + D SF
Sbjct: 498 TGTLSDSDCSDTDTPFASPTRLLIPPTKQRSLDAGRAEVRVDVDSTPTPTPPERHDSFSF 557
Query: 655 RLKPAHSL 678
PAH+L
Sbjct: 558 PRLPAHNL 565
>10_08_0050 + 14469879-14470072,14470620-14471094
Length = 222
Score = 30.7 bits (66), Expect = 1.4
Identities = 11/25 (44%), Positives = 18/25 (72%)
Frame = -3
Query: 293 GWTDTKNEHVNAENQIELLQFCRRD 219
G+T T ++ N+ N E+L+FCRR+
Sbjct: 101 GFTSTSSDRSNSGNSSEMLRFCRRE 125
>08_02_0823 +
21557111-21557292,21557391-21557473,21557722-21557810,
21557985-21558058,21558264-21558314,21558406-21558482,
21560206-21560900
Length = 416
Score = 30.7 bits (66), Expect = 1.4
Identities = 21/53 (39%), Positives = 23/53 (43%)
Frame = -3
Query: 692 KDAQGSECAGLSRKDSTSAYCQGRAGGRVSPDARRGGRDGCRLRAPEATPRRR 534
K E A S DS+S C G GG V P RR R R AP P +R
Sbjct: 3 KRRSNGETAAASSDDSSSGVCGGGGGGEVEP-RRRQKRP--RRSAPRDCPSQR 52
>02_04_0028 +
19027510-19027983,19028087-19028278,19028369-19028545,
19029568-19029663,19030487-19030618,19030950-19031008,
19031234-19031321,19031433-19031693
Length = 492
Score = 30.3 bits (65), Expect = 1.8
Identities = 14/37 (37%), Positives = 18/37 (48%)
Frame = +1
Query: 508 TELSSAPSLRRRGVASGARSLQPSRPPRRASGDTRPP 618
T+ + S GA + QP RPP+ G TRPP
Sbjct: 18 TQRRESTSTSTAAAEGGAVASQPPRPPQPRPGTTRPP 54
>01_01_1008 - 7987936-7988628,7988923-7989102
Length = 290
Score = 30.3 bits (65), Expect = 1.8
Identities = 24/64 (37%), Positives = 30/64 (46%), Gaps = 1/64 (1%)
Frame = -3
Query: 710 IRHYWRKDAQGSECAGLSRKDSTSAYCQGRAGGRVSPDARRGGRDGCRLRAPEAT-PRRR 534
+R W + G GL R+ S S + + R RV RRGG G + EA RRR
Sbjct: 209 LRRRWTETDVGG---GLGRRCSRSPWWRRRGEARVRRRGRRGG--GGEVNGEEAARSRRR 263
Query: 533 RDGA 522
R GA
Sbjct: 264 RRGA 267
>09_06_0111 -
20924838-20924969,20925147-20925290,20925391-20925453,
20925993-20926116,20926779-20927005,20927088-20927255,
20927348-20927498,20927567-20927889
Length = 443
Score = 29.9 bits (64), Expect = 2.4
Identities = 25/79 (31%), Positives = 37/79 (46%), Gaps = 3/79 (3%)
Frame = +1
Query: 373 SAGGLGIVVGHTRIARPATMAAPRAVLSIMRGRMTGIPSKSACICT---ELSSAPSLRRR 543
+A ++ + +R A ++A RA S +PS S C S+A +LR R
Sbjct: 3 AAASSSLLAAASSSSRAAAVSARRAP-SASPAAAASLPSPSRASCAPPLRASAARTLRSR 61
Query: 544 GVASGARSLQPSRPPRRAS 600
VAS A ++QP P R S
Sbjct: 62 VVASAAPAMQPP-PASRVS 79
>08_01_0525 +
4564885-4565221,4565337-4565476,4565582-4565677,
4566079-4566146,4566542-4566643,4567492-4567630,
4567758-4567898,4568241-4568297,4568400-4568459,
4568866-4568973,4569834-4569994,4570453-4570531,
4571357-4571490,4571846-4571951,4572244-4572432,
4572595-4572822,4573028-4573183,4573491-4573532,
4573752-4573868,4573945-4574121
Length = 878
Score = 29.9 bits (64), Expect = 2.4
Identities = 17/58 (29%), Positives = 22/58 (37%)
Frame = -2
Query: 600 RRAPWRTRWLQTARP*GNSSPTEGWRRTQFCADAG*FTGYTSHSSPHDGKYSPGGGHC 427
R PW ++P + P R+ AD TG + S H PGG HC
Sbjct: 10 RGRPWHVLPSSPSQPPSSPPPRASADRSSAAADLDLGTGRSGEHSVHRVFLDPGGKHC 67
>04_04_0910 -
29321128-29321276,29321977-29322508,29323301-29323706,
29323933-29324028,29324563-29324645,29326620-29326732,
29327156-29327315
Length = 512
Score = 29.9 bits (64), Expect = 2.4
Identities = 21/51 (41%), Positives = 26/51 (50%)
Frame = -3
Query: 695 RKDAQGSECAGLSRKDSTSAYCQGRAGGRVSPDARRGGRDGCRLRAPEATP 543
R+D +GSE A +SR + C AGG + P ARR G R R A P
Sbjct: 312 RRDGRGSEAARMSRHGA----C---AGGALRPSARRPSAVGRRPRVSVAWP 355
>12_02_0625 -
21331209-21331273,21331364-21331555,21332348-21332558,
21333600-21333700,21333839-21333844,21333956-21334051,
21334485-21334497
Length = 227
Score = 29.5 bits (63), Expect = 3.1
Identities = 17/47 (36%), Positives = 21/47 (44%)
Frame = -3
Query: 512 SVQMQADLLGIPVIRPLMMESTALGAAIVAGRAMRVWPTTIPSPPAD 372
S +QADLLG PVIRP + AG ++ PP D
Sbjct: 38 SAHLQADLLGSPVIRPSEPLELQKQLELAAGIWIKAVDPAFGLPPVD 84
>07_01_0511 +
3806475-3806876,3807914-3808039,3808120-3808193,
3808278-3808347,3808431-3808486,3808578-3808649,
3808678-3808811,3808967-3809030,3809111-3809240,
3809326-3809541,3809629-3809750,3810527-3810701,
3810788-3810878,3811040-3811197,3811330-3811518,
3813257-3813340,3813362-3813536,3815300-3815955,
3816226-3816648,3816752-3816790
Length = 1151
Score = 29.5 bits (63), Expect = 3.1
Identities = 18/40 (45%), Positives = 21/40 (52%)
Frame = -3
Query: 623 RAGGRVSPDARRGGRDGCRLRAPEATPRRRRDGAELSSVQ 504
RAG RV P A R GR G R A PR RR E+ ++
Sbjct: 37 RAGKRVPPPAIR-GRKGAAGRRGGAAPRGRRKAVEVVDLE 75
>01_06_0681 - 31150651-31151148,31151427-31151483
Length = 184
Score = 29.5 bits (63), Expect = 3.1
Identities = 13/36 (36%), Positives = 17/36 (47%)
Frame = -3
Query: 671 CAGLSRKDSTSAYCQGRAGGRVSPDARRGGRDGCRL 564
C +D C+GR+G SP A GG G R+
Sbjct: 138 CLVRGMRDIVRISCRGRSGDSASPSAAPGGGAGARI 173
>05_01_0029 + 187769-188707,188971-189246,189978-190174,190263-190404,
190584-190862,190941-191013,191331-191379,192169-192433,
192576-192631,192777-192845,193028-193139,193682-193771,
193955-194125,194449-194506,194970-195128,195379-195401
Length = 985
Score = 29.1 bits (62), Expect = 4.1
Identities = 13/28 (46%), Positives = 14/28 (50%)
Frame = +2
Query: 365 GMYRPVGWVLSWATHALRDLRQWPPPGL 448
G PVGW L + T L D PPP L
Sbjct: 926 GNNNPVGWPLRFLTPVLSDENSVPPPSL 953
>10_02_0175 - 6207485-6207898
Length = 137
Score = 28.7 bits (61), Expect = 5.5
Identities = 13/28 (46%), Positives = 13/28 (46%)
Frame = -2
Query: 621 RWRPCVTRRAPWRTRWLQTARP*GNSSP 538
RWR RR WR RW Q R G P
Sbjct: 52 RWRAAAARRGEWR-RWRQRRRGGGRRRP 78
>09_01_0117 +
1808669-1809181,1810038-1810059,1810170-1810223,
1810684-1810892
Length = 265
Score = 28.7 bits (61), Expect = 5.5
Identities = 18/62 (29%), Positives = 27/62 (43%)
Frame = -3
Query: 539 RRRDGAELSSVQMQADLLGIPVIRPLMMESTALGAAIVAGRAMRVWPTTIPSPPADTFLP 360
RRR + L + A G P+ + AA++ G A T+ P PP+ T P
Sbjct: 98 RRRHSSHLFAAPRHASTAGAPIATLRYSAVLGIEAAVLVGTARD--STSSPIPPSSTGAP 155
Query: 359 AL 354
+L
Sbjct: 156 SL 157
>04_04_1487 - 33919654-33920399,33920676-33920817
Length = 295
Score = 28.7 bits (61), Expect = 5.5
Identities = 26/70 (37%), Positives = 33/70 (47%), Gaps = 4/70 (5%)
Frame = -3
Query: 623 RAGGRVSPDARRGGR---DGCRLRAPEATPRRRRDGAELSS-VQMQADLLGIPVIRPLMM 456
R+GG V D G +G A PRRRR GA+++S V AD +P+ P
Sbjct: 160 RSGGGVGGDEVDGAETFVEGGDKEGERAAPRRRRVGADVASRVCGGADEERVPL--PRRA 217
Query: 455 ESTALGAAIV 426
E A G IV
Sbjct: 218 EVAAAGEIIV 227
>04_04_1220 + 31843628-31844755
Length = 375
Score = 28.7 bits (61), Expect = 5.5
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = -2
Query: 441 GGGHCRRSRNACVAHDNTQPT 379
GGGH R R +CV D+ +P+
Sbjct: 231 GGGHMRERRTSCVVVDDMEPS 251
>03_04_0069 - 17022468-17023361
Length = 297
Score = 28.7 bits (61), Expect = 5.5
Identities = 17/35 (48%), Positives = 20/35 (57%), Gaps = 3/35 (8%)
Frame = -3
Query: 629 QGRAGGRVSPDARRGGRDGCRLR---APEATPRRR 534
+GRAG R + R GGR R+R AP PRRR
Sbjct: 254 RGRAGARGARVRRVGGRAARRVRHLGAPPCAPRRR 288
>08_01_0619 +
5412058-5413224,5413357-5413476,5413755-5413831,
5414201-5414321
Length = 494
Score = 28.3 bits (60), Expect = 7.2
Identities = 21/74 (28%), Positives = 36/74 (48%)
Frame = +1
Query: 400 GHTRIARPATMAAPRAVLSIMRGRMTGIPSKSACICTELSSAPSLRRRGVASGARSLQPS 579
GH I RP+ ++ A ++R R+TG S+ + +++ + RRR P+
Sbjct: 72 GHVTI-RPSELSRREA--QVLRARLTGELSRVRALLSDIDGWEARRRR----------PA 118
Query: 580 RPPRRASGDTRPPA 621
PPR+ + PPA
Sbjct: 119 EPPRQRGHVSPPPA 132
>05_05_0227 - 23449579-23450459,23450574-23450691
Length = 332
Score = 28.3 bits (60), Expect = 7.2
Identities = 14/28 (50%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
Frame = -3
Query: 647 STSAYCQGRAGG-RVSPDARRGGRDGCR 567
++S+ C+G GG R S ARR G D CR
Sbjct: 225 ASSSSCRGDGGGGRPSAPARREGTDPCR 252
>04_04_0726 + 27588225-27588685,27588768-27588895,27590523-27591016
Length = 360
Score = 28.3 bits (60), Expect = 7.2
Identities = 19/71 (26%), Positives = 31/71 (43%), Gaps = 4/71 (5%)
Frame = -3
Query: 581 RDGCRLRAPEATPRRRRDGAELSSVQMQADLLGIPVI----RPLMMESTALGAAIVAGRA 414
+ CR R RRRR A + + A G+PV+ P + +++ GA + A
Sbjct: 165 KKSCRRRLAGHNERRRRSNASEAMARGSAHPHGMPVLGHGFPPYGLPTSSAGALSLLSSA 224
Query: 413 MRVWPTTIPSP 381
P +P+P
Sbjct: 225 RATGPWLMPTP 235
>03_05_0355 - 23420410-23420548,23420643-23420794
Length = 96
Score = 28.3 bits (60), Expect = 7.2
Identities = 15/35 (42%), Positives = 18/35 (51%)
Frame = +1
Query: 415 ARPATMAAPRAVLSIMRGRMTGIPSKSACICTELS 519
ARP AA + + R+TG PS S C ELS
Sbjct: 50 ARPMAAAAMMGSPAAVAARLTGHPSASVRACCELS 84
>02_01_0360 -
2594534-2594601,2594778-2594829,2594915-2595029,
2595124-2595212,2595326-2595391,2595468-2595657,
2595811-2596037,2596111-2596185,2596283-2596354,
2596507-2596577,2596848-2597036,2597186-2597298,
2598063-2598268
Length = 510
Score = 28.3 bits (60), Expect = 7.2
Identities = 21/59 (35%), Positives = 27/59 (45%)
Frame = +1
Query: 391 IVVGHTRIARPATMAAPRAVLSIMRGRMTGIPSKSACICTELSSAPSLRRRGVASGARS 567
+ V +A PA +AAP AVL+ + SA SS+P LRR GA S
Sbjct: 17 LFVARVALAAPAQLAAPLAVLAAAALAVELAVDASASASASASSSP-LRRFRTRPGASS 74
>01_06_0561 +
30251547-30252173,30252248-30252405,30253250-30254192,
30254271-30254438,30254546-30254857,30255498-30255557,
30255905-30255937,30256083-30256271
Length = 829
Score = 28.3 bits (60), Expect = 7.2
Identities = 19/51 (37%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Frame = -3
Query: 671 CAGLSRKDSTSAYCQGRAGGRVSPDARRGGRDGCRLRAPEATP-RRRRDGA 522
C +S + A+ + +G VS G DG PE +P RRRRDGA
Sbjct: 101 CFVVSPPFARVAFIESASGSDVSGSC--SGSDGSEEADPEPSPPRRRRDGA 149
>01_01_0937 -
7388230-7388283,7388957-7389091,7389201-7389365,
7389436-7389516,7389692-7389767,7389855-7389988,
7390082-7390174,7390885-7391018,7391125-7391533,
7392381-7392593
Length = 497
Score = 28.3 bits (60), Expect = 7.2
Identities = 22/74 (29%), Positives = 29/74 (39%)
Frame = +1
Query: 367 NVSAGGLGIVVGHTRIARPATMAAPRAVLSIMRGRMTGIPSKSACICTELSSAPSLRRRG 546
NV+AGG A AAP S+ GR G SA AP++ R
Sbjct: 57 NVAAGGGAPGKAGNAKLNLAASAAPVKKGSLASGRNVGTNRASAVKSASAKPAPAISRHE 116
Query: 547 VASGARSLQPSRPP 588
A+ S+ P + P
Sbjct: 117 SATQKESVLPPKVP 130
>10_08_0042 -
14383143-14383628,14383647-14384609,14384697-14386443,
14387901-14388010,14388767-14389003
Length = 1180
Score = 27.9 bits (59), Expect = 9.6
Identities = 18/44 (40%), Positives = 22/44 (50%), Gaps = 2/44 (4%)
Frame = +1
Query: 499 CICTEL--SSAPSLRRRGVASGARSLQPSRPPRRASGDTRPPAR 624
C C+ + S PS R GV+S L PSRP +R G R R
Sbjct: 140 CCCSGVLGGSPPSSRTAGVSSPG--LSPSRPSKRRIGRARVQPR 181
>10_07_0130 +
13241085-13241151,13241268-13241339,13242458-13242862,
13243057-13243112,13244116-13244274,13244379-13244498,
13244591-13245361,13245902-13246078,13246192-13246669,
13247502-13248094
Length = 965
Score = 27.9 bits (59), Expect = 9.6
Identities = 17/49 (34%), Positives = 20/49 (40%)
Frame = -3
Query: 665 GLSRKDSTSAYCQGRAGGRVSPDARRGGRDGCRLRAPEATPRRRRDGAE 519
G R+ S GG V D RR GR G + E PR GA+
Sbjct: 823 GRRRRGGFSCGGANDGGGDVRADMRREGRRGLQHMEGEGVPREPGGGAD 871
>05_07_0308 +
29115892-29116083,29116771-29116885,29116978-29117087,
29118225-29118350,29118450-29118570,29118665-29118749,
29118854-29118967,29119061-29119100,29119517-29119665,
29120223-29120412,29121674-29122228,29123588-29123815,
29123904-29124044,29124134-29124334,29124447-29124728
Length = 882
Score = 27.9 bits (59), Expect = 9.6
Identities = 14/44 (31%), Positives = 20/44 (45%)
Frame = +1
Query: 484 PSKSACICTELSSAPSLRRRGVASGARSLQPSRPPRRASGDTRP 615
PS + SS+ ++R R S +RS P PP + T P
Sbjct: 81 PSGPEVRSSSFSSSENVRARSSGSSSRSAAPPPPPPQTDSATNP 124
>05_04_0031 + 17353292-17354353
Length = 353
Score = 27.9 bits (59), Expect = 9.6
Identities = 15/28 (53%), Positives = 20/28 (71%), Gaps = 1/28 (3%)
Frame = +1
Query: 484 PSKSACIC-TELSSAPSLRRRGVASGAR 564
PS++A I T + AP+ RRGVASG+R
Sbjct: 187 PSEAAQISNTAATPAPAAARRGVASGSR 214
>04_04_0555 -
26210346-26211458,26211530-26211719,26211826-26211960,
26212072-26212169,26212262-26212425,26213558-26214032
Length = 724
Score = 27.9 bits (59), Expect = 9.6
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = +1
Query: 511 ELSSAPSLRRRGVASGARSLQPSRPPRRASGD 606
E+ A LRRRG SG R+ PSR A+ +
Sbjct: 22 EMVEASELRRRGKPSGDRATGPSRDGAAAAAE 53
>01_06_0049 - 25953811-25954131,25954223-25954903
Length = 333
Score = 27.9 bits (59), Expect = 9.6
Identities = 14/39 (35%), Positives = 20/39 (51%)
Frame = +1
Query: 502 ICTELSSAPSLRRRGVASGARSLQPSRPPRRASGDTRPP 618
I +S L ++ A+ A S P+R PR +S T PP
Sbjct: 187 ISVRSTSYLKLNQQSQAATATSAAPNRKPRTSSNPTNPP 225
>01_06_0040 -
25874308-25874611,25875743-25875822,25876764-25876996,
25877285-25877354
Length = 228
Score = 27.9 bits (59), Expect = 9.6
Identities = 23/71 (32%), Positives = 31/71 (43%)
Frame = -3
Query: 569 RLRAPEATPRRRRDGAELSSVQMQADLLGIPVIRPLMMESTALGAAIVAGRAMRVWPTTI 390
R R E + RR +L +M+ + L L E+ L + RAMRV P T+
Sbjct: 114 RPRQVEVWFQNRRARTKLKQTEMECEYLK-RCFGSLTEENRRLQREVEELRAMRVAPPTV 172
Query: 389 PSPPADTFLPA 357
SP LPA
Sbjct: 173 LSPHTRQPLPA 183
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,532,995
Number of Sequences: 37544
Number of extensions: 554142
Number of successful extensions: 2011
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 1895
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2008
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2091906552
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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