Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= psV30471.Seq
(559 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC071674-1|AAH71674.1| 152|Homo sapiens RPS16 protein protein. 124 4e-31
M60854-1|AAA60583.1| 146|Homo sapiens RPS16 protein. 130 2e-30
BC007977-1|AAH07977.1| 146|Homo sapiens ribosomal protein S16 p... 130 2e-30
BC004324-1|AAH04324.1| 146|Homo sapiens ribosomal protein S16 p... 130 2e-30
AB061841-1|BAB79479.1| 146|Homo sapiens ribosomal protein S16 p... 130 2e-30
AK097937-1|BAC85106.1| 178|Homo sapiens protein ( Homo sapiens ... 82 1e-15
BC064361-1|AAH64361.1| 1056|Homo sapiens pleckstrin homology dom... 36 0.096
AK074103-1|BAB84929.1| 628|Homo sapiens FLJ00174 protein protein. 36 0.096
AJ002220-1|CAB91652.1| 926|Homo sapiens protein ( Homo sapiens ... 36 0.096
AB002354-1|BAA20813.2| 1058|Homo sapiens KIAA0356 protein protein. 36 0.096
BC057240-1|AAH57240.1| 396|Homo sapiens mitochondrial ribosomal... 33 0.51
BC047784-1|AAH47784.1| 302|Homo sapiens MRPS9 protein protein. 33 0.51
BC054882-1|AAH54882.1| 204|Homo sapiens Unknown (protein for IM... 30 6.3
AL391827-3|CAI16232.1| 689|Homo sapiens novel protein protein. 30 6.3
AL391827-2|CAI16231.1| 198|Homo sapiens novel protein protein. 30 6.3
>BC071674-1|AAH71674.1| 152|Homo sapiens RPS16 protein protein.
Length = 152
Score = 124 bits (298), Expect(2) = 4e-31
Identities = 55/80 (68%), Positives = 69/80 (86%)
Frame = +1
Query: 16 IQAVQVFGRKXTATAVAYCKRGHGMLRVNGRPLDLVXPRLLQYKLQEPILLLGKEKFSMV 195
+Q+VQVFGRK TATAVA+CKRG+G+++VNGRPL+++ PR LQYKL EP+LLLGKE+F+ V
Sbjct: 7 LQSVQVFGRKKTATAVAHCKRGNGLIKVNGRPLEMIEPRTLQYKLLEPVLLLGKERFAGV 66
Query: 196 XIRXTVKGGGHVAQVYAIRQ 255
IR VKGGGHVAQ+Y Q
Sbjct: 67 DIRVRVKGGGHVAQIYGESQ 86
Score = 30.7 bits (66), Expect(2) = 4e-31
Identities = 14/27 (51%), Positives = 17/27 (62%)
Frame = +1
Query: 277 PSTRNM*TKPQRRKSKTS*YNTIGVCW 357
P TRNM + RR+SKTS + G CW
Sbjct: 126 PITRNMWMRLPRRRSKTSSSSMTGPCW 152
>M60854-1|AAA60583.1| 146|Homo sapiens RPS16 protein.
Length = 146
Score = 130 bits (315), Expect = 2e-30
Identities = 58/80 (72%), Positives = 72/80 (90%)
Frame = +1
Query: 16 IQAVQVFGRKXTATAVAYCKRGHGMLRVNGRPLDLVXPRLLQYKLQEPILLLGKEKFSMV 195
+Q+VQVFGRK TATAVA+CKRG+G+++VNGRPL+++ PR LQYKL EP+LLLGKE+F+ V
Sbjct: 7 LQSVQVFGRKKTATAVAHCKRGNGLIKVNGRPLEMIEPRTLQYKLLEPVLLLGKERFAGV 66
Query: 196 XIRXTVKGGGHVAQVYAIRQ 255
IR VKGGGHVAQ+YAIRQ
Sbjct: 67 DIRVRVKGGGHVAQIYAIRQ 86
Score = 120 bits (288), Expect = 5e-27
Identities = 54/60 (90%), Positives = 59/60 (98%)
Frame = +3
Query: 255 AISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVADPRRCEPKKFGGPGARARYQKSYR 434
+ISKAL+A+YQKYVDEASKKEIKDIL+QYDR+LLVADPRRCE KKFGGPGARARYQKSYR
Sbjct: 87 SISKALVAYYQKYVDEASKKEIKDILIQYDRTLLVADPRRCESKKFGGPGARARYQKSYR 146
>BC007977-1|AAH07977.1| 146|Homo sapiens ribosomal protein S16
protein.
Length = 146
Score = 130 bits (315), Expect = 2e-30
Identities = 58/80 (72%), Positives = 72/80 (90%)
Frame = +1
Query: 16 IQAVQVFGRKXTATAVAYCKRGHGMLRVNGRPLDLVXPRLLQYKLQEPILLLGKEKFSMV 195
+Q+VQVFGRK TATAVA+CKRG+G+++VNGRPL+++ PR LQYKL EP+LLLGKE+F+ V
Sbjct: 7 LQSVQVFGRKKTATAVAHCKRGNGLIKVNGRPLEMIEPRTLQYKLLEPVLLLGKERFAGV 66
Query: 196 XIRXTVKGGGHVAQVYAIRQ 255
IR VKGGGHVAQ+YAIRQ
Sbjct: 67 DIRVRVKGGGHVAQIYAIRQ 86
Score = 120 bits (288), Expect = 5e-27
Identities = 54/60 (90%), Positives = 59/60 (98%)
Frame = +3
Query: 255 AISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVADPRRCEPKKFGGPGARARYQKSYR 434
+ISKAL+A+YQKYVDEASKKEIKDIL+QYDR+LLVADPRRCE KKFGGPGARARYQKSYR
Sbjct: 87 SISKALVAYYQKYVDEASKKEIKDILIQYDRTLLVADPRRCESKKFGGPGARARYQKSYR 146
>BC004324-1|AAH04324.1| 146|Homo sapiens ribosomal protein S16
protein.
Length = 146
Score = 130 bits (315), Expect = 2e-30
Identities = 58/80 (72%), Positives = 72/80 (90%)
Frame = +1
Query: 16 IQAVQVFGRKXTATAVAYCKRGHGMLRVNGRPLDLVXPRLLQYKLQEPILLLGKEKFSMV 195
+Q+VQVFGRK TATAVA+CKRG+G+++VNGRPL+++ PR LQYKL EP+LLLGKE+F+ V
Sbjct: 7 LQSVQVFGRKKTATAVAHCKRGNGLIKVNGRPLEMIEPRTLQYKLLEPVLLLGKERFAGV 66
Query: 196 XIRXTVKGGGHVAQVYAIRQ 255
IR VKGGGHVAQ+YAIRQ
Sbjct: 67 DIRVRVKGGGHVAQIYAIRQ 86
Score = 120 bits (288), Expect = 5e-27
Identities = 54/60 (90%), Positives = 59/60 (98%)
Frame = +3
Query: 255 AISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVADPRRCEPKKFGGPGARARYQKSYR 434
+ISKAL+A+YQKYVDEASKKEIKDIL+QYDR+LLVADPRRCE KKFGGPGARARYQKSYR
Sbjct: 87 SISKALVAYYQKYVDEASKKEIKDILIQYDRTLLVADPRRCESKKFGGPGARARYQKSYR 146
>AB061841-1|BAB79479.1| 146|Homo sapiens ribosomal protein S16
protein.
Length = 146
Score = 130 bits (315), Expect = 2e-30
Identities = 58/80 (72%), Positives = 72/80 (90%)
Frame = +1
Query: 16 IQAVQVFGRKXTATAVAYCKRGHGMLRVNGRPLDLVXPRLLQYKLQEPILLLGKEKFSMV 195
+Q+VQVFGRK TATAVA+CKRG+G+++VNGRPL+++ PR LQYKL EP+LLLGKE+F+ V
Sbjct: 7 LQSVQVFGRKKTATAVAHCKRGNGLIKVNGRPLEMIEPRTLQYKLLEPVLLLGKERFAGV 66
Query: 196 XIRXTVKGGGHVAQVYAIRQ 255
IR VKGGGHVAQ+YAIRQ
Sbjct: 67 DIRVRVKGGGHVAQIYAIRQ 86
Score = 120 bits (288), Expect = 5e-27
Identities = 54/60 (90%), Positives = 59/60 (98%)
Frame = +3
Query: 255 AISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVADPRRCEPKKFGGPGARARYQKSYR 434
+ISKAL+A+YQKYVDEASKKEIKDIL+QYDR+LLVADPRRCE KKFGGPGARARYQKSYR
Sbjct: 87 SISKALVAYYQKYVDEASKKEIKDILIQYDRTLLVADPRRCESKKFGGPGARARYQKSYR 146
>AK097937-1|BAC85106.1| 178|Homo sapiens protein ( Homo sapiens
cDNA FLJ40618 fis, clone THYMU2013089, moderately
similar to 40S RIBOSOMAL PROTEIN S16. ).
Length = 178
Score = 82.2 bits (194), Expect = 1e-15
Identities = 50/149 (33%), Positives = 68/149 (45%)
Frame = +1
Query: 4 RRXXIQAVQVFGRKXTATAVAYCKRGHGMLRVNGRPLDLVXPRLLQYKLQEPILLLGKEK 183
R +Q+VQ+F K A AV C+ G G +R+N PL+++ LQYKL E LLL KE+
Sbjct: 14 RTRWLQSVQIFTYKEMAIAVVLCRCGSGFIRMNEGPLEMIRLLTLQYKLLELGLLLDKEQ 73
Query: 184 FSMVXIRXTVKGGGHVAQVYAIRQLFQRL*SPSTRNM*TKPQRRKSKTS*YNTIGVCWWL 363
+ + I VKG GHV Q+YA+ Q + P + T CWW
Sbjct: 74 LAGMDIHVRVKGSGHVVQIYAVLQYISKALVPCYPKYVDEASEEIKDT----LTRPCWWF 129
Query: 364 TXXXXXXXXXXXXXXXXDTRNLTVKPSRK 450
T TRN + KP +K
Sbjct: 130 TPVAMNPRNLQALVPVLTTRNHSSKPIKK 158
>BC064361-1|AAH64361.1| 1056|Homo sapiens pleckstrin homology domain
containing, family M (with RUN domain) member 1 protein.
Length = 1056
Score = 35.9 bits (79), Expect = 0.096
Identities = 23/56 (41%), Positives = 28/56 (50%)
Frame = -2
Query: 300 RLHISGRRRSEPLK*LSDSVNLCYMTTTLDCXSDXNHREFFLAEQKDRFLKFVLQQ 133
R+H+ GRRR E LK L D + LC + NHR + L E RF LQQ
Sbjct: 914 RMHLIGRRR-EQLKLLGDYLGLCRSGALKELSKRLNHRNYLL-ESPHRFSVADLQQ 967
>AK074103-1|BAB84929.1| 628|Homo sapiens FLJ00174 protein protein.
Length = 628
Score = 35.9 bits (79), Expect = 0.096
Identities = 23/56 (41%), Positives = 28/56 (50%)
Frame = -2
Query: 300 RLHISGRRRSEPLK*LSDSVNLCYMTTTLDCXSDXNHREFFLAEQKDRFLKFVLQQ 133
R+H+ GRRR E LK L D + LC + NHR + L E RF LQQ
Sbjct: 486 RMHLIGRRR-EQLKLLGDYLGLCRSGALKELSKRLNHRNYLL-ESPHRFSVADLQQ 539
>AJ002220-1|CAB91652.1| 926|Homo sapiens protein ( Homo sapiens B2
gene partial cDNA, clone B2E. ).
Length = 926
Score = 35.9 bits (79), Expect = 0.096
Identities = 23/56 (41%), Positives = 28/56 (50%)
Frame = -2
Query: 300 RLHISGRRRSEPLK*LSDSVNLCYMTTTLDCXSDXNHREFFLAEQKDRFLKFVLQQ 133
R+H+ GRRR E LK L D + LC + NHR + L E RF LQQ
Sbjct: 784 RMHLIGRRR-EQLKLLGDYLGLCRSGALKELSKRLNHRNYLL-ESPHRFSVADLQQ 837
>AB002354-1|BAA20813.2| 1058|Homo sapiens KIAA0356 protein protein.
Length = 1058
Score = 35.9 bits (79), Expect = 0.096
Identities = 23/56 (41%), Positives = 28/56 (50%)
Frame = -2
Query: 300 RLHISGRRRSEPLK*LSDSVNLCYMTTTLDCXSDXNHREFFLAEQKDRFLKFVLQQ 133
R+H+ GRRR E LK L D + LC + NHR + L E RF LQQ
Sbjct: 916 RMHLIGRRR-EQLKLLGDYLGLCRSGALKELSKRLNHRNYLL-ESPHRFSVADLQQ 969
>BC057240-1|AAH57240.1| 396|Homo sapiens mitochondrial ribosomal
protein S9 protein.
Length = 396
Score = 33.5 bits (73), Expect = 0.51
Identities = 25/73 (34%), Positives = 34/73 (46%), Gaps = 1/73 (1%)
Frame = +1
Query: 37 GRKXTATAVAYC-KRGHGMLRVNGRPLDLVXPRLLQYKLQEPILLLGKEKFSMVXIRXTV 213
G++ TA A A K G G ++VNG L P + Q + Q ++ + TV
Sbjct: 274 GKRKTAKAEAIVYKHGSGRIKVNGIDYQLYFP-ITQDREQLMFPFHFVDRLGKHDVTCTV 332
Query: 214 KGGGHVAQVYAIR 252
GGG AQ AIR
Sbjct: 333 SGGGRSAQAGAIR 345
>BC047784-1|AAH47784.1| 302|Homo sapiens MRPS9 protein protein.
Length = 302
Score = 33.5 bits (73), Expect = 0.51
Identities = 25/73 (34%), Positives = 34/73 (46%), Gaps = 1/73 (1%)
Frame = +1
Query: 37 GRKXTATAVAYC-KRGHGMLRVNGRPLDLVXPRLLQYKLQEPILLLGKEKFSMVXIRXTV 213
G++ TA A A K G G ++VNG L P + Q + Q ++ + TV
Sbjct: 180 GKRKTAKAEAIVYKHGSGRIKVNGIDYQLYFP-ITQDREQLMFPFHFVDRLGKHDVTCTV 238
Query: 214 KGGGHVAQVYAIR 252
GGG AQ AIR
Sbjct: 239 SGGGRSAQAGAIR 251
>BC054882-1|AAH54882.1| 204|Homo sapiens Unknown (protein for
IMAGE:6451327) protein.
Length = 204
Score = 29.9 bits (64), Expect = 6.3
Identities = 11/29 (37%), Positives = 19/29 (65%), Gaps = 1/29 (3%)
Frame = +3
Query: 303 ASKKEIKD-ILVQYDRSLLVADPRRCEPK 386
ASKK +K+ +++ YD + DP +C P+
Sbjct: 16 ASKKPLKEKVVLMYDEIFMTEDPSKCSPR 44
>AL391827-3|CAI16232.1| 689|Homo sapiens novel protein protein.
Length = 689
Score = 29.9 bits (64), Expect = 6.3
Identities = 11/29 (37%), Positives = 19/29 (65%), Gaps = 1/29 (3%)
Frame = +3
Query: 303 ASKKEIKD-ILVQYDRSLLVADPRRCEPK 386
ASKK +K+ +++ YD + DP +C P+
Sbjct: 16 ASKKPLKEKVVLMYDEIFMTEDPSKCSPR 44
>AL391827-2|CAI16231.1| 198|Homo sapiens novel protein protein.
Length = 198
Score = 29.9 bits (64), Expect = 6.3
Identities = 11/29 (37%), Positives = 19/29 (65%), Gaps = 1/29 (3%)
Frame = +3
Query: 303 ASKKEIKD-ILVQYDRSLLVADPRRCEPK 386
ASKK +K+ +++ YD + DP +C P+
Sbjct: 16 ASKKPLKEKVVLMYDEIFMTEDPSKCSPR 44
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 79,891,593
Number of Sequences: 237096
Number of extensions: 1563292
Number of successful extensions: 3439
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 3370
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3438
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5590411794
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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