Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= psV30468.Seq
(746 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC12D12.03 |cct1||chaperonin-containing T-complex alpha subuni... 120 3e-28
SPAC1D4.04 |cct2||chaperonin-containing T-complex beta subunit C... 79 9e-16
SPBC1A4.08c |cct3||chaperonin-containing T-complex gamma subunit... 74 2e-14
SPAC1420.02c |cct5||chaperonin-containing T-complex epsilon subu... 71 2e-13
SPBC25H2.12c |cct7||chaperonin-containing T-complex eta subunit ... 71 2e-13
SPBC106.06 |cct4||chaperonin-containing T-complex delta subunit ... 70 4e-13
SPBC646.11 |cct6||chaperonin-containing T-complex zeta subunit C... 57 3e-09
SPBC337.05c |cct8||chaperonin-containing T-complex theta subunit... 57 3e-09
SPAC12G12.04 |hsp60|hsp60|mitochondrial heat shock protein Hsp60... 33 0.043
SPCPB1C11.01 |amt1||ammonium transporter Amt1|Schizosaccharomyce... 28 1.6
SPCC18.09c |||conserved eukaryotic protein|Schizosaccharomyces p... 27 2.1
SPAC17A2.12 |||ATP-dependent DNA helicase|Schizosaccharomyces po... 27 2.8
SPBC8E4.01c ||SPBP4G3.01|inorganic phosphate transporter |Schizo... 26 5.0
SPCC63.04 |mok14||alpha-1,3-glucan synthase Mok14|Schizosaccharo... 26 5.0
SPBC1683.01 |||inorganic phosphate transporter |Schizosaccharomy... 26 5.0
SPAC23D3.12 |||inorganic phosphate transporter |Schizosaccharomy... 26 6.6
>SPBC12D12.03 |cct1||chaperonin-containing T-complex alpha subunit
Cct1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 556
Score = 120 bits (288), Expect = 3e-28
Identities = 59/87 (67%), Positives = 73/87 (83%)
Frame = +3
Query: 249 IKMLEXXXPAAKVLVELAQLQDXEVGDGTTSVVIIAAELLKNADELVKTKIHPTSIISGY 428
+ +L+ PA KVLVELAQ QD EVGDGTTSVVIIAAELL+ A+ELVK KIHPT+II+GY
Sbjct: 67 LSLLDVEHPAGKVLVELAQQQDKEVGDGTTSVVIIAAELLRRANELVKNKIHPTTIITGY 126
Query: 429 RLACKEAVKYIQDNLTVTVESLGRPSL 509
RLA +EAVK++ D L+ +V+SLG+ SL
Sbjct: 127 RLAIREAVKFMTDVLSCSVDSLGKESL 153
Score = 65.3 bits (152), Expect = 9e-12
Identities = 33/54 (61%), Positives = 36/54 (66%)
Frame = +1
Query: 91 GQDPAGDPVRTQXXXXXXXXXXXXXXSLGPVGLDKMLVDDIGDVTVTNDGATIL 252
G+ +G+ VR Q SLGPVGLDKMLVDDIGDVTVTNDGATIL
Sbjct: 14 GEKISGEDVRNQNVLATTAIANVVKSSLGPVGLDKMLVDDIGDVTVTNDGATIL 67
Score = 48.8 bits (111), Expect = 8e-07
Identities = 28/71 (39%), Positives = 36/71 (50%)
Frame = +2
Query: 509 IXTAXTTMSSKLIGADADFFSEXVVDAAQAIXTMNPRGNXYIPYXSYXPF*KPTAGXQGG 688
I A T+MSSK+IG D+DFFS VDA ++ T N +G P + G
Sbjct: 154 INVAKTSMSSKIIGNDSDFFSTMAVDAMLSVKTSNSKGETRYPVKAVNIL--KAHGKSSR 211
Query: 689 KCACPKGYALN 721
+ KGYALN
Sbjct: 212 ESVLVKGYALN 222
>SPAC1D4.04 |cct2||chaperonin-containing T-complex beta subunit
Cct2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 527
Score = 78.6 bits (185), Expect = 9e-16
Identities = 37/68 (54%), Positives = 49/68 (72%)
Frame = +3
Query: 249 IKMLEXXXPAAKVLVELAQLQDXEVGDGTTSVVIIAAELLKNADELVKTKIHPTSIISGY 428
+K + AAKVLV ++++QD EVGDGTTSV + AAELL+ A+ +V KIHP II GY
Sbjct: 67 LKSIALDNAAAKVLVNISKVQDDEVGDGTTSVCVFAAELLRQAEIMVNAKIHPQVIIDGY 126
Query: 429 RLACKEAV 452
R+A K A+
Sbjct: 127 RIATKTAI 134
Score = 40.3 bits (90), Expect = 3e-04
Identities = 19/30 (63%), Positives = 24/30 (80%), Gaps = 1/30 (3%)
Frame = +1
Query: 169 SLGPVGLDKMLVDDI-GDVTVTNDGATILK 255
+LGP G+DK+L + GD+ VTNDGATILK
Sbjct: 39 TLGPKGMDKILQSNSSGDIVVTNDGATILK 68
Score = 25.4 bits (53), Expect = 8.7
Identities = 10/24 (41%), Positives = 17/24 (70%)
Frame = +2
Query: 518 AXTTMSSKLIGADADFFSEXVVDA 589
A TT+SSK++ + + F++ VDA
Sbjct: 159 ARTTLSSKILSQNKNHFAQLAVDA 182
>SPBC1A4.08c |cct3||chaperonin-containing T-complex gamma subunit
Cct3|Schizosaccharomyces pombe|chr 2|||Manual
Length = 528
Score = 73.7 bits (173), Expect = 2e-14
Identities = 36/79 (45%), Positives = 54/79 (68%)
Frame = +3
Query: 249 IKMLEXXXPAAKVLVELAQLQDXEVGDGTTSVVIIAAELLKNADELVKTKIHPTSIISGY 428
++ +E PAAK ++ELA+ QD EVGDGTTSV+I+A E+L A L+ KIHP +I +
Sbjct: 65 LREIEVAHPAAKSMIELARTQDEEVGDGTTSVIILAGEILAAASPLLDRKIHPVVMIRSF 124
Query: 429 RLACKEAVKYIQDNLTVTV 485
+ A ++A+ I D +T+ V
Sbjct: 125 KQALEDALSII-DEITLPV 142
Score = 34.7 bits (76), Expect = 0.014
Identities = 15/28 (53%), Positives = 20/28 (71%)
Frame = +1
Query: 172 LGPVGLDKMLVDDIGDVTVTNDGATILK 255
LGP + KML+D +G V +TNDG IL+
Sbjct: 39 LGPRAMLKMLLDPVGSVLLTNDGHAILR 66
>SPAC1420.02c |cct5||chaperonin-containing T-complex epsilon subunit
Cct5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 546
Score = 70.9 bits (166), Expect = 2e-13
Identities = 32/71 (45%), Positives = 47/71 (66%)
Frame = +3
Query: 249 IKMLEXXXPAAKVLVELAQLQDXEVGDGTTSVVIIAAELLKNADELVKTKIHPTSIISGY 428
+ +E AK+LV+L++ QD E+GDGTT VV++A LL+ A+ L+ IHP I GY
Sbjct: 80 LDQMEVEHQIAKLLVQLSKSQDDEIGDGTTGVVVLAGALLEQAEALIDKGIHPIRIADGY 139
Query: 429 RLACKEAVKYI 461
AC+ AVK++
Sbjct: 140 EKACQVAVKHL 150
Score = 45.6 bits (103), Expect = 8e-06
Identities = 20/28 (71%), Positives = 24/28 (85%)
Frame = +1
Query: 169 SLGPVGLDKMLVDDIGDVTVTNDGATIL 252
SLGP GLDK+L+ G++TVTNDGATIL
Sbjct: 53 SLGPRGLDKILISPDGEITVTNDGATIL 80
>SPBC25H2.12c |cct7||chaperonin-containing T-complex eta subunit
Cct7|Schizosaccharomyces pombe|chr 2|||Manual
Length = 558
Score = 70.9 bits (166), Expect = 2e-13
Identities = 36/73 (49%), Positives = 49/73 (67%)
Frame = +3
Query: 249 IKMLEXXXPAAKVLVELAQLQDXEVGDGTTSVVIIAAELLKNADELVKTKIHPTSIISGY 428
+K+L+ PAAK LV++A+ QD EVGDGTTSVV+ A ELL+ A V+ + II GY
Sbjct: 70 MKLLDIVHPAAKTLVDIARAQDAEVGDGTTSVVVFAGELLREARTFVEDGVSSHLIIRGY 129
Query: 429 RLACKEAVKYIQD 467
R A + AV I++
Sbjct: 130 RKAAQLAVNKIKE 142
Score = 46.8 bits (106), Expect = 3e-06
Identities = 18/29 (62%), Positives = 26/29 (89%)
Frame = +1
Query: 169 SLGPVGLDKMLVDDIGDVTVTNDGATILK 255
+LGP+G DK++VDD G+V ++NDGATI+K
Sbjct: 43 TLGPLGADKLMVDDRGEVVISNDGATIMK 71
Score = 29.1 bits (62), Expect = 0.70
Identities = 13/24 (54%), Positives = 19/24 (79%)
Frame = +2
Query: 518 AXTTMSSKLIGADADFFSEXVVDA 589
A T M+SKLI +++ FF++ VVDA
Sbjct: 163 ASTAMNSKLIRSNSTFFTKMVVDA 186
>SPBC106.06 |cct4||chaperonin-containing T-complex delta subunit
Cct4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 527
Score = 69.7 bits (163), Expect = 4e-13
Identities = 38/87 (43%), Positives = 54/87 (62%)
Frame = +3
Query: 249 IKMLEXXXPAAKVLVELAQLQDXEVGDGTTSVVIIAAELLKNADELVKTKIHPTSIISGY 428
+K L PAAK+LV+L+ QD E GDGTTSVVI+A +L A++L+K IHPT I +
Sbjct: 65 LKHLSVLHPAAKMLVDLSAAQDVEAGDGTTSVVILAGSMLACAEKLLKKGIHPTVIAESF 124
Query: 429 RLACKEAVKYIQDNLTVTVESLGRPSL 509
+ A V +++N + +E R SL
Sbjct: 125 QRAAGFTVDCMKEN-ALAIELSDRESL 150
Score = 42.3 bits (95), Expect = 7e-05
Identities = 19/29 (65%), Positives = 23/29 (79%)
Frame = +1
Query: 169 SLGPVGLDKMLVDDIGDVTVTNDGATILK 255
SLGP G+DKM+ G+V +TNDGATILK
Sbjct: 38 SLGPKGMDKMIQTGKGEVILTNDGATILK 66
>SPBC646.11 |cct6||chaperonin-containing T-complex zeta subunit
Cct6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 535
Score = 56.8 bits (131), Expect = 3e-09
Identities = 25/68 (36%), Positives = 40/68 (58%)
Frame = +3
Query: 258 LEXXXPAAKVLVELAQLQDXEVGDGTTSVVIIAAELLKNADELVKTKIHPTSIISGYRLA 437
++ P A + + A QD GDGTTSV ++ ELLK A+ ++ +HP+ I G+ LA
Sbjct: 65 MQIQNPTASCIAKAATAQDDATGDGTTSVCLLVGELLKQAELYIREGLHPSLISDGFNLA 124
Query: 438 CKEAVKYI 461
EA+ ++
Sbjct: 125 KNEALTFL 132
Score = 33.5 bits (73), Expect = 0.033
Identities = 14/28 (50%), Positives = 18/28 (64%)
Frame = +1
Query: 169 SLGPVGLDKMLVDDIGDVTVTNDGATIL 252
+LGP G KMLVD G + +T DG +L
Sbjct: 35 NLGPTGTTKMLVDGAGAIKLTKDGKVLL 62
>SPBC337.05c |cct8||chaperonin-containing T-complex theta subunit
Cct8 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 546
Score = 56.8 bits (131), Expect = 3e-09
Identities = 25/82 (30%), Positives = 46/82 (56%)
Frame = +3
Query: 249 IKMLEXXXPAAKVLVELAQLQDXEVGDGTTSVVIIAAELLKNADELVKTKIHPTSIISGY 428
I+ LE PAAK++V+ Q Q+ E+GD VV+ ELL A+ +++ + P I GY
Sbjct: 72 IRELEVIHPAAKLVVDATQQQENELGDAANFVVVFTGELLAKAENMIRMGLTPLEIAKGY 131
Query: 429 RLACKEAVKYIQDNLTVTVESL 494
+A ++ +++ +E++
Sbjct: 132 EMALSHTMEVLEEICADKIETV 153
Score = 31.1 bits (67), Expect = 0.17
Identities = 13/29 (44%), Positives = 21/29 (72%)
Frame = +1
Query: 169 SLGPVGLDKMLVDDIGDVTVTNDGATILK 255
SLGP G +K++V+ + +TND ATI++
Sbjct: 45 SLGPNGKNKIVVNHLQQTFLTNDAATIIR 73
>SPAC12G12.04 |hsp60|hsp60|mitochondrial heat shock protein
Hsp60|Schizosaccharomyces pombe|chr 1|||Manual
Length = 582
Score = 33.1 bits (72), Expect = 0.043
Identities = 15/64 (23%), Positives = 31/64 (48%)
Frame = +3
Query: 279 AKVLVELAQLQDXEVGDGTTSVVIIAAELLKNADELVKTKIHPTSIISGYRLACKEAVKY 458
A+++ ++A + GDGTT+ ++ + V +P + G +LA V++
Sbjct: 102 ARLVQDVASKTNEVAGDGTTTATVLTRAIFSETVRNVAAGCNPMDLRRGIQLAVDNVVEF 161
Query: 459 IQDN 470
+Q N
Sbjct: 162 LQAN 165
>SPCPB1C11.01 |amt1||ammonium transporter Amt1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 497
Score = 27.9 bits (59), Expect = 1.6
Identities = 11/36 (30%), Positives = 20/36 (55%)
Frame = -2
Query: 118 SLGLRQDLVPATDKGAAIVDIFYCIFNTKFTLKSPS 11
+ GLRQ L + +++ DI +C+F F +P+
Sbjct: 103 NFGLRQTLGRPSSGASSVPDILFCVFQGMFAAITPA 138
>SPCC18.09c |||conserved eukaryotic protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 232
Score = 27.5 bits (58), Expect = 2.1
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = +3
Query: 393 TKIHPTSIISGYRLACKEAVKYIQDNLTVTVESLGRPSLSXQ 518
T +HP I+ +R ++ V Y+Q +L+ + R LS Q
Sbjct: 82 THVHPLEIMMKHRSLVEKLVSYVQGDLSGLIFDEARNCLSQQ 123
>SPAC17A2.12 |||ATP-dependent DNA helicase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 897
Score = 27.1 bits (57), Expect = 2.8
Identities = 10/31 (32%), Positives = 20/31 (64%)
Frame = +3
Query: 336 TSVVIIAAELLKNADELVKTKIHPTSIISGY 428
T++++++ LL E + TK+HP+ +S Y
Sbjct: 302 TNLIVVSVALLHQWAEELSTKVHPSKKLSVY 332
>SPBC8E4.01c ||SPBP4G3.01|inorganic phosphate transporter
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 572
Score = 26.2 bits (55), Expect = 5.0
Identities = 7/17 (41%), Positives = 13/17 (76%)
Frame = +2
Query: 170 PLGQLVWIRCWLTILGM 220
PL +++W+ CW +LG+
Sbjct: 150 PLSKMMWVFCWRWLLGV 166
>SPCC63.04 |mok14||alpha-1,3-glucan synthase Mok14|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1369
Score = 26.2 bits (55), Expect = 5.0
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = -2
Query: 745 PWGGLPGPVQSIALW 701
PW G+ GP S ALW
Sbjct: 1250 PWAGIAGPYLSRALW 1264
>SPBC1683.01 |||inorganic phosphate transporter |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 573
Score = 26.2 bits (55), Expect = 5.0
Identities = 7/17 (41%), Positives = 13/17 (76%)
Frame = +2
Query: 170 PLGQLVWIRCWLTILGM 220
PL +++W+ CW +LG+
Sbjct: 150 PLSKMMWVFCWRWLLGV 166
>SPAC23D3.12 |||inorganic phosphate transporter |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 559
Score = 25.8 bits (54), Expect = 6.6
Identities = 8/17 (47%), Positives = 13/17 (76%)
Frame = +2
Query: 170 PLGQLVWIRCWLTILGM 220
PLG+++WI W +LG+
Sbjct: 145 PLGKMMWIFAWRWLLGL 161
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,521,099
Number of Sequences: 5004
Number of extensions: 40339
Number of successful extensions: 104
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 91
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 104
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 355273338
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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