Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= psV30468.Seq
         (746 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U29486-1|AAC46995.1|  695|Anopheles gambiae ATP-binding-cassette...    28   0.35 
U29485-1|AAC46994.1|  695|Anopheles gambiae ATP-binding-cassette...    28   0.35 
U29484-1|AAC47423.1|  673|Anopheles gambiae ATP-binding-cassette...    28   0.35 
AY578812-1|AAT07317.1|  932|Anopheles gambiae wishful thinking p...    24   5.7  

>U29486-1|AAC46995.1|  695|Anopheles gambiae ATP-binding-cassette
           protein protein.
          Length = 695

 Score = 27.9 bits (59), Expect = 0.35
 Identities = 10/21 (47%), Positives = 16/21 (76%)
 Frame = +1

Query: 202 VDDIGDVTVTNDGATILKCWK 264
           +DD  + T+TND AT+++ WK
Sbjct: 34  MDDALNTTLTNDKATLIQVWK 54


>U29485-1|AAC46994.1|  695|Anopheles gambiae ATP-binding-cassette
           protein protein.
          Length = 695

 Score = 27.9 bits (59), Expect = 0.35
 Identities = 10/21 (47%), Positives = 16/21 (76%)
 Frame = +1

Query: 202 VDDIGDVTVTNDGATILKCWK 264
           +DD  + T+TND AT+++ WK
Sbjct: 34  MDDALNTTLTNDKATLIQVWK 54


>U29484-1|AAC47423.1|  673|Anopheles gambiae ATP-binding-cassette
           protein protein.
          Length = 673

 Score = 27.9 bits (59), Expect = 0.35
 Identities = 10/21 (47%), Positives = 16/21 (76%)
 Frame = +1

Query: 202 VDDIGDVTVTNDGATILKCWK 264
           +DD  + T+TND AT+++ WK
Sbjct: 12  MDDALNTTLTNDKATLIQVWK 32


>AY578812-1|AAT07317.1|  932|Anopheles gambiae wishful thinking
           protein.
          Length = 932

 Score = 23.8 bits (49), Expect = 5.7
 Identities = 10/28 (35%), Positives = 13/28 (46%)
 Frame = -1

Query: 692 TFPLXXRPWAFRMVNSLXRVYXNFLWGS 609
           T P     W F +V ++ RV     WGS
Sbjct: 92  TAPFCYTLWTFDIVKNVTRVVVQGCWGS 119


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 660,313
Number of Sequences: 2352
Number of extensions: 10695
Number of successful extensions: 34
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 76923555
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)