Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= psV30468.Seq
(746 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z66500-12|CAA91308.1| 549|Caenorhabditis elegans Hypothetical p... 134 5e-32
U07941-1|AAB05072.1| 549|Caenorhabditis elegans CCT-1 protein. 134 5e-32
Z68318-10|CAA92697.1| 529|Caenorhabditis elegans Hypothetical p... 81 6e-16
U25632-1|AAA93233.1| 529|Caenorhabditis elegans CCT-2 protein. 81 6e-16
AL031268-2|CAA20331.1| 529|Caenorhabditis elegans Hypothetical ... 81 6e-16
AC024136-4|AAF35963.3| 543|Caenorhabditis elegans Hypothetical ... 73 2e-13
AF067947-11|AAO25994.1| 455|Caenorhabditis elegans Hypothetical... 71 7e-13
AF067947-10|AAC19232.2| 535|Caenorhabditis elegans Hypothetical... 71 7e-13
Z35599-3|CAA84660.1| 542|Caenorhabditis elegans Hypothetical pr... 70 2e-12
Z32840-7|CAA83681.1| 542|Caenorhabditis elegans Hypothetical pr... 70 2e-12
U25698-1|AAA92843.1| 542|Caenorhabditis elegans CCT-5 protein. 70 2e-12
Z49068-8|CAA88861.1| 540|Caenorhabditis elegans Hypothetical pr... 66 3e-11
U25697-1|AAA92842.1| 540|Caenorhabditis elegans CCT-4 protein. 66 3e-11
AC024827-1|AAF60806.2| 581|Caenorhabditis elegans Hypothetical ... 58 7e-09
U13070-3|AAM22058.1| 429|Caenorhabditis elegans Chaperonin cont... 51 1e-06
U13070-2|AAC46642.1| 539|Caenorhabditis elegans Chaperonin cont... 51 1e-06
AC084153-6|AAK84594.1| 568|Caenorhabditis elegans Heat shock pr... 30 2.0
Z81042-2|CAB02793.1| 458|Caenorhabditis elegans Hypothetical pr... 28 6.1
>Z66500-12|CAA91308.1| 549|Caenorhabditis elegans Hypothetical
protein T05C12.7 protein.
Length = 549
Score = 134 bits (325), Expect = 5e-32
Identities = 64/87 (73%), Positives = 75/87 (86%)
Frame = +3
Query: 249 IKMLEXXXPAAKVLVELAQLQDXEVGDGTTSVVIIAAELLKNADELVKTKIHPTSIISGY 428
+K LE PA KVLVELAQLQD EVGDGTTSVVI+AAELLK ADELVK K+HPT+II+GY
Sbjct: 66 LKQLEVEHPAGKVLVELAQLQDEEVGDGTTSVVIVAAELLKRADELVKQKVHPTTIINGY 125
Query: 429 RLACKEAVKYIQDNLTVTVESLGRPSL 509
RLACKEAVKYI +N++ T +S+GR S+
Sbjct: 126 RLACKEAVKYISENISFTSDSIGRQSV 152
Score = 62.9 bits (146), Expect = 2e-10
Identities = 31/55 (56%), Positives = 35/55 (63%)
Frame = +1
Query: 91 GQDPAGDPVRTQXXXXXXXXXXXXXXSLGPVGLDKMLVDDIGDVTVTNDGATILK 255
G+ G +R+Q SLGPVGLDKMLVDD+GDV VTNDGATILK
Sbjct: 13 GKRTTGQGIRSQNVTAAVAIANIVKSSLGPVGLDKMLVDDVGDVIVTNDGATILK 67
Score = 50.4 bits (115), Expect = 1e-06
Identities = 30/71 (42%), Positives = 37/71 (52%)
Frame = +2
Query: 509 IXTAXTTMSSKLIGADADFFSEXVVDAAQAIXTMNPRGNXYIPYXSYXPF*KPTAGXQGG 688
+ A T+MSSK+IG DADFF E VVDAA+A+ N N + Y G
Sbjct: 153 VNAAKTSMSSKIIGPDADFFGELVVDAAEAVRVEN---NGKVTYPINAVNVLKAHGKSAR 209
Query: 689 KCACPKGYALN 721
+ KGYALN
Sbjct: 210 ESVLVKGYALN 220
>U07941-1|AAB05072.1| 549|Caenorhabditis elegans CCT-1 protein.
Length = 549
Score = 134 bits (325), Expect = 5e-32
Identities = 64/87 (73%), Positives = 75/87 (86%)
Frame = +3
Query: 249 IKMLEXXXPAAKVLVELAQLQDXEVGDGTTSVVIIAAELLKNADELVKTKIHPTSIISGY 428
+K LE PA KVLVELAQLQD EVGDGTTSVVI+AAELLK ADELVK K+HPT+II+GY
Sbjct: 66 LKQLEVEHPAGKVLVELAQLQDEEVGDGTTSVVIVAAELLKRADELVKQKVHPTTIINGY 125
Query: 429 RLACKEAVKYIQDNLTVTVESLGRPSL 509
RLACKEAVKYI +N++ T +S+GR S+
Sbjct: 126 RLACKEAVKYISENISFTSDSIGRQSV 152
Score = 62.9 bits (146), Expect = 2e-10
Identities = 31/55 (56%), Positives = 35/55 (63%)
Frame = +1
Query: 91 GQDPAGDPVRTQXXXXXXXXXXXXXXSLGPVGLDKMLVDDIGDVTVTNDGATILK 255
G+ G +R+Q SLGPVGLDKMLVDD+GDV VTNDGATILK
Sbjct: 13 GKRTTGQGIRSQNVTAAVAIANIVKSSLGPVGLDKMLVDDVGDVIVTNDGATILK 67
Score = 50.4 bits (115), Expect = 1e-06
Identities = 30/71 (42%), Positives = 37/71 (52%)
Frame = +2
Query: 509 IXTAXTTMSSKLIGADADFFSEXVVDAAQAIXTMNPRGNXYIPYXSYXPF*KPTAGXQGG 688
+ A T+MSSK+IG DADFF E VVDAA+A+ N N + Y G
Sbjct: 153 VNAAKTSMSSKIIGPDADFFGELVVDAAEAVRVEN---NGKVTYPINAVNVLKAHGKSAR 209
Query: 689 KCACPKGYALN 721
+ KGYALN
Sbjct: 210 ESVLVKGYALN 220
>Z68318-10|CAA92697.1| 529|Caenorhabditis elegans Hypothetical
protein T21B10.7 protein.
Length = 529
Score = 81.4 bits (192), Expect = 6e-16
Identities = 38/63 (60%), Positives = 49/63 (77%)
Frame = +3
Query: 249 IKMLEXXXPAAKVLVELAQLQDXEVGDGTTSVVIIAAELLKNADELVKTKIHPTSIISGY 428
+K + PAAKVLV+++ QD EVGDGTTSV ++AAELLK A++LV +IHP +IISGY
Sbjct: 68 LKSIGVDNPAAKVLVDMSMTQDHEVGDGTTSVTVLAAELLKEAEKLVNQRIHPQTIISGY 127
Query: 429 RLA 437
R A
Sbjct: 128 RRA 130
Score = 38.3 bits (85), Expect = 0.006
Identities = 21/58 (36%), Positives = 29/58 (50%), Gaps = 4/58 (6%)
Frame = +1
Query: 94 QDPAGDPVRTQXXXXXXXXXXXXXXSLGPVGLDKMLV----DDIGDVTVTNDGATILK 255
Q+ G+ R +LGP G+DK+L+ + G + VTNDGATILK
Sbjct: 12 QEERGESARLSSFVGAIAIGDLVKSTLGPKGMDKILISGNPESAGGIKVTNDGATILK 69
>U25632-1|AAA93233.1| 529|Caenorhabditis elegans CCT-2 protein.
Length = 529
Score = 81.4 bits (192), Expect = 6e-16
Identities = 38/63 (60%), Positives = 49/63 (77%)
Frame = +3
Query: 249 IKMLEXXXPAAKVLVELAQLQDXEVGDGTTSVVIIAAELLKNADELVKTKIHPTSIISGY 428
+K + PAAKVLV+++ QD EVGDGTTSV ++AAELLK A++LV +IHP +IISGY
Sbjct: 68 LKSIGVDNPAAKVLVDMSMTQDHEVGDGTTSVTVLAAELLKEAEKLVNQRIHPQTIISGY 127
Query: 429 RLA 437
R A
Sbjct: 128 RRA 130
Score = 38.3 bits (85), Expect = 0.006
Identities = 21/58 (36%), Positives = 29/58 (50%), Gaps = 4/58 (6%)
Frame = +1
Query: 94 QDPAGDPVRTQXXXXXXXXXXXXXXSLGPVGLDKMLV----DDIGDVTVTNDGATILK 255
Q+ G+ R +LGP G+DK+L+ + G + VTNDGATILK
Sbjct: 12 QEERGESARLSSFVGAIAIGDLVKSTLGPKGMDKILISGNPESAGGIKVTNDGATILK 69
>AL031268-2|CAA20331.1| 529|Caenorhabditis elegans Hypothetical
protein T21B10.7 protein.
Length = 529
Score = 81.4 bits (192), Expect = 6e-16
Identities = 38/63 (60%), Positives = 49/63 (77%)
Frame = +3
Query: 249 IKMLEXXXPAAKVLVELAQLQDXEVGDGTTSVVIIAAELLKNADELVKTKIHPTSIISGY 428
+K + PAAKVLV+++ QD EVGDGTTSV ++AAELLK A++LV +IHP +IISGY
Sbjct: 68 LKSIGVDNPAAKVLVDMSMTQDHEVGDGTTSVTVLAAELLKEAEKLVNQRIHPQTIISGY 127
Query: 429 RLA 437
R A
Sbjct: 128 RRA 130
Score = 38.3 bits (85), Expect = 0.006
Identities = 21/58 (36%), Positives = 29/58 (50%), Gaps = 4/58 (6%)
Frame = +1
Query: 94 QDPAGDPVRTQXXXXXXXXXXXXXXSLGPVGLDKMLV----DDIGDVTVTNDGATILK 255
Q+ G+ R +LGP G+DK+L+ + G + VTNDGATILK
Sbjct: 12 QEERGESARLSSFVGAIAIGDLVKSTLGPKGMDKILISGNPESAGGIKVTNDGATILK 69
>AC024136-4|AAF35963.3| 543|Caenorhabditis elegans Hypothetical
protein F54A3.3 protein.
Length = 543
Score = 72.9 bits (171), Expect = 2e-13
Identities = 31/72 (43%), Positives = 51/72 (70%)
Frame = +3
Query: 273 PAAKVLVELAQLQDXEVGDGTTSVVIIAAELLKNADELVKTKIHPTSIISGYRLACKEAV 452
PAAK ++E+A+ QD E GDGTTSV+I+A E++ +A ++ K HPT II YR A ++ +
Sbjct: 77 PAAKSMIEIARTQDEETGDGTTSVIILAGEVMAHAQTYLEQKTHPTLIIKAYRQALEDMI 136
Query: 453 KYIQDNLTVTVE 488
++ ++ + TV+
Sbjct: 137 QWSENKFSKTVD 148
Score = 35.1 bits (77), Expect = 0.053
Identities = 15/29 (51%), Positives = 21/29 (72%)
Frame = +1
Query: 169 SLGPVGLDKMLVDDIGDVTVTNDGATILK 255
SLGP + KML+D +G + +TNDG IL+
Sbjct: 42 SLGPRAMLKMLMDPMGGIVMTNDGNAILR 70
>AF067947-11|AAO25994.1| 455|Caenorhabditis elegans Hypothetical
protein T10B5.5b protein.
Length = 455
Score = 71.3 bits (167), Expect = 7e-13
Identities = 31/73 (42%), Positives = 49/73 (67%)
Frame = +3
Query: 249 IKMLEXXXPAAKVLVELAQLQDXEVGDGTTSVVIIAAELLKNADELVKTKIHPTSIISGY 428
+K+L+ PAA +V++A+ QD EVGDGTTSVV++AAE+LK ++ +HP +I
Sbjct: 66 LKLLDIVFPAASTMVDIARSQDAEVGDGTTSVVVLAAEILKQMKPFIEDGVHPQLLIRAI 125
Query: 429 RLACKEAVKYIQD 467
AC++ +K + D
Sbjct: 126 GKACEKTLKNLAD 138
Score = 44.4 bits (100), Expect = 9e-05
Identities = 19/29 (65%), Positives = 24/29 (82%)
Frame = +1
Query: 169 SLGPVGLDKMLVDDIGDVTVTNDGATILK 255
+LGP GLDK++VD G T++NDGATILK
Sbjct: 39 TLGPRGLDKLIVDSKGATTISNDGATILK 67
Score = 30.7 bits (66), Expect = 1.1
Identities = 14/46 (30%), Positives = 23/46 (50%)
Frame = +2
Query: 479 NSRVTWQAVSIXTAXTTMSSKLIGADADFFSEXVVDAAQAIXTMNP 616
N + + + A TT+SSKL+ + FF+ +VDA + P
Sbjct: 144 NGETELREMLVKCAATTLSSKLVSQERLFFANMIVDAVNTLDAHLP 189
>AF067947-10|AAC19232.2| 535|Caenorhabditis elegans Hypothetical
protein T10B5.5a protein.
Length = 535
Score = 71.3 bits (167), Expect = 7e-13
Identities = 31/73 (42%), Positives = 49/73 (67%)
Frame = +3
Query: 249 IKMLEXXXPAAKVLVELAQLQDXEVGDGTTSVVIIAAELLKNADELVKTKIHPTSIISGY 428
+K+L+ PAA +V++A+ QD EVGDGTTSVV++AAE+LK ++ +HP +I
Sbjct: 66 LKLLDIVFPAASTMVDIARSQDAEVGDGTTSVVVLAAEILKQMKPFIEDGVHPQLLIRAI 125
Query: 429 RLACKEAVKYIQD 467
AC++ +K + D
Sbjct: 126 GKACEKTLKNLAD 138
Score = 44.4 bits (100), Expect = 9e-05
Identities = 19/29 (65%), Positives = 24/29 (82%)
Frame = +1
Query: 169 SLGPVGLDKMLVDDIGDVTVTNDGATILK 255
+LGP GLDK++VD G T++NDGATILK
Sbjct: 39 TLGPRGLDKLIVDSKGATTISNDGATILK 67
Score = 30.7 bits (66), Expect = 1.1
Identities = 14/46 (30%), Positives = 23/46 (50%)
Frame = +2
Query: 479 NSRVTWQAVSIXTAXTTMSSKLIGADADFFSEXVVDAAQAIXTMNP 616
N + + + A TT+SSKL+ + FF+ +VDA + P
Sbjct: 144 NGETELREMLVKCAATTLSSKLVSQERLFFANMIVDAVNTLDAHLP 189
>Z35599-3|CAA84660.1| 542|Caenorhabditis elegans Hypothetical
protein C07G2.3a protein.
Length = 542
Score = 69.7 bits (163), Expect = 2e-12
Identities = 30/59 (50%), Positives = 45/59 (76%)
Frame = +3
Query: 279 AKVLVELAQLQDXEVGDGTTSVVIIAAELLKNADELVKTKIHPTSIISGYRLACKEAVK 455
AK++VEL++ QD E+GDGTT VV++A LL+ A++L+ IHP I G+ LACK+A++
Sbjct: 89 AKLMVELSKSQDHEIGDGTTGVVVLAGALLEEAEKLIDRGIHPIKIADGFDLACKKALE 147
Score = 48.8 bits (111), Expect = 4e-06
Identities = 22/29 (75%), Positives = 25/29 (86%)
Frame = +1
Query: 169 SLGPVGLDKMLVDDIGDVTVTNDGATILK 255
SLGP GLDKMLV GDVT+TNDGATI++
Sbjct: 52 SLGPRGLDKMLVSPDGDVTITNDGATIME 80
>Z32840-7|CAA83681.1| 542|Caenorhabditis elegans Hypothetical
protein C07G2.3a protein.
Length = 542
Score = 69.7 bits (163), Expect = 2e-12
Identities = 30/59 (50%), Positives = 45/59 (76%)
Frame = +3
Query: 279 AKVLVELAQLQDXEVGDGTTSVVIIAAELLKNADELVKTKIHPTSIISGYRLACKEAVK 455
AK++VEL++ QD E+GDGTT VV++A LL+ A++L+ IHP I G+ LACK+A++
Sbjct: 89 AKLMVELSKSQDHEIGDGTTGVVVLAGALLEEAEKLIDRGIHPIKIADGFDLACKKALE 147
Score = 48.8 bits (111), Expect = 4e-06
Identities = 22/29 (75%), Positives = 25/29 (86%)
Frame = +1
Query: 169 SLGPVGLDKMLVDDIGDVTVTNDGATILK 255
SLGP GLDKMLV GDVT+TNDGATI++
Sbjct: 52 SLGPRGLDKMLVSPDGDVTITNDGATIME 80
>U25698-1|AAA92843.1| 542|Caenorhabditis elegans CCT-5 protein.
Length = 542
Score = 69.7 bits (163), Expect = 2e-12
Identities = 30/59 (50%), Positives = 45/59 (76%)
Frame = +3
Query: 279 AKVLVELAQLQDXEVGDGTTSVVIIAAELLKNADELVKTKIHPTSIISGYRLACKEAVK 455
AK++VEL++ QD E+GDGTT VV++A LL+ A++L+ IHP I G+ LACK+A++
Sbjct: 89 AKLMVELSKSQDHEIGDGTTGVVVLAGALLEEAEKLIDRGIHPIKIADGFDLACKKALE 147
Score = 48.8 bits (111), Expect = 4e-06
Identities = 22/29 (75%), Positives = 25/29 (86%)
Frame = +1
Query: 169 SLGPVGLDKMLVDDIGDVTVTNDGATILK 255
SLGP GLDKMLV GDVT+TNDGATI++
Sbjct: 52 SLGPRGLDKMLVSPDGDVTITNDGATIME 80
>Z49068-8|CAA88861.1| 540|Caenorhabditis elegans Hypothetical
protein K01C8.10 protein.
Length = 540
Score = 65.7 bits (153), Expect = 3e-11
Identities = 31/73 (42%), Positives = 45/73 (61%)
Frame = +3
Query: 249 IKMLEXXXPAAKVLVELAQLQDXEVGDGTTSVVIIAAELLKNADELVKTKIHPTSIISGY 428
+ + P AK+LVEL++ QD E GDGTT+VV++A LL A L+ IHPT+I +
Sbjct: 77 LNQMSVIHPTAKMLVELSKAQDIEAGDGTTTVVVMAGALLDAAQNLLSKGIHPTTISESF 136
Query: 429 RLACKEAVKYIQD 467
+ A EA K + +
Sbjct: 137 QSAAAEAEKILDE 149
Score = 45.2 bits (102), Expect = 5e-05
Identities = 20/28 (71%), Positives = 23/28 (82%)
Frame = +1
Query: 169 SLGPVGLDKMLVDDIGDVTVTNDGATIL 252
SLGP G+DKM+ GDVT+TNDGATIL
Sbjct: 50 SLGPRGMDKMIQSGNGDVTITNDGATIL 77
>U25697-1|AAA92842.1| 540|Caenorhabditis elegans CCT-4 protein.
Length = 540
Score = 65.7 bits (153), Expect = 3e-11
Identities = 31/73 (42%), Positives = 45/73 (61%)
Frame = +3
Query: 249 IKMLEXXXPAAKVLVELAQLQDXEVGDGTTSVVIIAAELLKNADELVKTKIHPTSIISGY 428
+ + P AK+LVEL++ QD E GDGTT+VV++A LL A L+ IHPT+I +
Sbjct: 77 LNQMSVIHPTAKMLVELSKAQDIEAGDGTTTVVVMAGALLDAAQNLLSKGIHPTTISESF 136
Query: 429 RLACKEAVKYIQD 467
+ A EA K + +
Sbjct: 137 QSAAAEAEKILDE 149
Score = 45.2 bits (102), Expect = 5e-05
Identities = 20/28 (71%), Positives = 23/28 (82%)
Frame = +1
Query: 169 SLGPVGLDKMLVDDIGDVTVTNDGATIL 252
SLGP G+DKM+ GDVT+TNDGATIL
Sbjct: 50 SLGPRGMDKMIQSGNGDVTITNDGATIL 77
>AC024827-1|AAF60806.2| 581|Caenorhabditis elegans Hypothetical
protein Y55F3AR.3 protein.
Length = 581
Score = 58.0 bits (134), Expect = 7e-09
Identities = 24/71 (33%), Positives = 47/71 (66%)
Frame = +3
Query: 249 IKMLEXXXPAAKVLVELAQLQDXEVGDGTTSVVIIAAELLKNADELVKTKIHPTSIISGY 428
+K LE PAA++++ ++Q+ ++GD T +VVI+AA LL++A L+ + P + +GY
Sbjct: 72 LKELEIQHPAARIIIMATEMQEKQIGDNTNTVVILAAALLEHAANLIHMGMTPQEVAAGY 131
Query: 429 RLACKEAVKYI 461
A ++A++ +
Sbjct: 132 EQAAEKALEIL 142
Score = 34.7 bits (76), Expect = 0.070
Identities = 15/27 (55%), Positives = 21/27 (77%)
Frame = +1
Query: 175 GPVGLDKMLVDDIGDVTVTNDGATILK 255
GP G++KM+++ I + VTND ATILK
Sbjct: 47 GPNGMNKMVINHIEKLFVTNDAATILK 73
>U13070-3|AAM22058.1| 429|Caenorhabditis elegans Chaperonin
containing tcp-1 protein6, isoform b protein.
Length = 429
Score = 50.8 bits (116), Expect = 1e-06
Identities = 22/64 (34%), Positives = 37/64 (57%)
Frame = +3
Query: 273 PAAKVLVELAQLQDXEVGDGTTSVVIIAAELLKNADELVKTKIHPTSIISGYRLACKEAV 452
P A ++ + + QD GDGTTS V++ ELLK A+ LV +HP + G+ A + +
Sbjct: 72 PTASMIAKASTAQDDVTGDGTTSTVLLIGELLKQAESLVLEGLHPRIVTEGFEWANTKTL 131
Query: 453 KYIQ 464
+ ++
Sbjct: 132 ELLE 135
Score = 31.9 bits (69), Expect = 0.50
Identities = 14/28 (50%), Positives = 18/28 (64%)
Frame = +1
Query: 169 SLGPVGLDKMLVDDIGDVTVTNDGATIL 252
+LGP G KMLV GD+ +T DG +L
Sbjct: 37 NLGPKGTLKMLVSGAGDIKLTKDGNVLL 64
>U13070-2|AAC46642.1| 539|Caenorhabditis elegans Chaperonin
containing tcp-1 protein6, isoform a protein.
Length = 539
Score = 50.8 bits (116), Expect = 1e-06
Identities = 22/64 (34%), Positives = 37/64 (57%)
Frame = +3
Query: 273 PAAKVLVELAQLQDXEVGDGTTSVVIIAAELLKNADELVKTKIHPTSIISGYRLACKEAV 452
P A ++ + + QD GDGTTS V++ ELLK A+ LV +HP + G+ A + +
Sbjct: 72 PTASMIAKASTAQDDVTGDGTTSTVLLIGELLKQAESLVLEGLHPRIVTEGFEWANTKTL 131
Query: 453 KYIQ 464
+ ++
Sbjct: 132 ELLE 135
Score = 31.9 bits (69), Expect = 0.50
Identities = 14/28 (50%), Positives = 18/28 (64%)
Frame = +1
Query: 169 SLGPVGLDKMLVDDIGDVTVTNDGATIL 252
+LGP G KMLV GD+ +T DG +L
Sbjct: 37 NLGPKGTLKMLVSGAGDIKLTKDGNVLL 64
>AC084153-6|AAK84594.1| 568|Caenorhabditis elegans Heat shock
protein protein 60 protein.
Length = 568
Score = 29.9 bits (64), Expect = 2.0
Identities = 12/38 (31%), Positives = 22/38 (57%)
Frame = +3
Query: 279 AKVLVELAQLQDXEVGDGTTSVVIIAAELLKNADELVK 392
AK++ ++A + E GDGTT ++A + K E ++
Sbjct: 86 AKLIQDVANKANEEAGDGTTCATVLARAIAKEGFESIR 123
>Z81042-2|CAB02793.1| 458|Caenorhabditis elegans Hypothetical
protein C27H6.2 protein.
Length = 458
Score = 28.3 bits (60), Expect = 6.1
Identities = 19/68 (27%), Positives = 30/68 (44%)
Frame = +3
Query: 273 PAAKVLVELAQLQDXEVGDGTTSVVIIAAELLKNADELVKTKIHPTSIISGYRLACKEAV 452
P A +A E+GDG V ++A+E+ N E+ KT++ S L KE
Sbjct: 90 PPATGKTAIALAMSQELGDGVPFVPLVASEVFSN--EVKKTEVLMRSFRRAIGLRVKETK 147
Query: 453 KYIQDNLT 476
+ +T
Sbjct: 148 DVYEGEVT 155
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,308,934
Number of Sequences: 27780
Number of extensions: 240886
Number of successful extensions: 570
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 500
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 567
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1766990064
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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