Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= psV30467.Seq
(731 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF125543-1|ABL73927.1| 475|Tribolium castaneum chitinase 4 prot... 23 1.9
DQ855492-1|ABH88179.1| 251|Tribolium castaneum chemosensory pro... 23 3.4
AJ457831-1|CAD29886.1| 249|Tribolium castaneum helix-loop-helix... 23 3.4
AJ223627-1|CAA11500.1| 371|Tribolium castaneum orthodenticle-1 ... 23 3.4
AJ518940-1|CAD57734.1| 361|Tribolium castaneum extradenticle pr... 22 4.4
AY800247-1|AAV66724.1| 790|Tribolium castaneum pangolin protein. 22 5.9
AY800246-1|AAV66723.1| 682|Tribolium castaneum pangolin protein. 22 5.9
AY600513-1|AAT11861.1| 314|Tribolium castaneum spalt-like prote... 22 5.9
AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax pr... 21 7.8
AF452568-1|AAL57830.1| 243|Tribolium castaneum homeodomain tran... 21 7.8
AF321227-5|AAK16425.1| 292|Tribolium castaneum Zen2 protein. 21 7.8
>EF125543-1|ABL73927.1| 475|Tribolium castaneum chitinase 4
protein.
Length = 475
Score = 23.4 bits (48), Expect = 1.9
Identities = 16/60 (26%), Positives = 26/60 (43%)
Frame = +3
Query: 438 EQIRGYIRNSHEPELSPIRATNGGASTRLQQGSYRVIPLTTSTGDSTPAPSTLAHALKQT 617
+ RG + + P L I T GG+S + + + + T ST AP+ + L T
Sbjct: 362 DDFRG-VSGTKYPILKAIHQTLGGSSNEIVEPVPQPVEEVTQKPSSTKAPAPPSRDLTTT 420
>DQ855492-1|ABH88179.1| 251|Tribolium castaneum chemosensory
protein 6 protein.
Length = 251
Score = 22.6 bits (46), Expect = 3.4
Identities = 12/33 (36%), Positives = 15/33 (45%), Gaps = 3/33 (9%)
Frame = +3
Query: 573 STPAP---STLAHALKQTELPEKPTIGPREKPI 662
STP P ST T+ KP+ P KP+
Sbjct: 158 STPLPPTTSTTTRTTLTTKFTTKPSTKPTNKPV 190
>AJ457831-1|CAD29886.1| 249|Tribolium castaneum helix-loop-helix
transcription factor protein.
Length = 249
Score = 22.6 bits (46), Expect = 3.4
Identities = 13/57 (22%), Positives = 23/57 (40%)
Frame = +3
Query: 477 ELSPIRATNGGASTRLQQGSYRVIPLTTSTGDSTPAPSTLAHALKQTELPEKPTIGP 647
+L P R NG + L +PL T + ++ A ++ PE ++ P
Sbjct: 173 QLVPTRLANGDIALVLPTQGASPLPLLVPIPQRTASTASSASNYSPSQSPEPESVRP 229
>AJ223627-1|CAA11500.1| 371|Tribolium castaneum orthodenticle-1
protein protein.
Length = 371
Score = 22.6 bits (46), Expect = 3.4
Identities = 16/68 (23%), Positives = 27/68 (39%), Gaps = 3/68 (4%)
Frame = +3
Query: 405 LNVPKSNNYV---NEQIRGYIRNSHEPELSPIRATNGGASTRLQQGSYRVIPLTTSTGDS 575
+N+P+S V N + + + + S R T + + S P + +T
Sbjct: 164 INLPESRVQVWFKNRRAKCRQQLQQQQNKSASRTTTSPTKVKASKASPAAAPRSVATPTG 223
Query: 576 TPAPSTLA 599
P PST A
Sbjct: 224 IPTPSTSA 231
>AJ518940-1|CAD57734.1| 361|Tribolium castaneum extradenticle
protein.
Length = 361
Score = 22.2 bits (45), Expect = 4.4
Identities = 9/29 (31%), Positives = 17/29 (58%)
Frame = +2
Query: 638 HRAERKTYRLLLGSSEQTKLEMKHRQEED 724
HR + + +L E+T L +++ QEE+
Sbjct: 68 HRMKPALFSVLCEIKEKTVLSLRNTQEEE 96
>AY800247-1|AAV66724.1| 790|Tribolium castaneum pangolin protein.
Length = 790
Score = 21.8 bits (44), Expect = 5.9
Identities = 11/23 (47%), Positives = 15/23 (65%), Gaps = 1/23 (4%)
Frame = +3
Query: 408 NVPKSNNYVNEQIRGYI-RNSHE 473
N+ KSN NEQ+R Y+ +N E
Sbjct: 319 NLEKSNLNHNEQLRKYLCKNEDE 341
>AY800246-1|AAV66723.1| 682|Tribolium castaneum pangolin protein.
Length = 682
Score = 21.8 bits (44), Expect = 5.9
Identities = 11/23 (47%), Positives = 15/23 (65%), Gaps = 1/23 (4%)
Frame = +3
Query: 408 NVPKSNNYVNEQIRGYI-RNSHE 473
N+ KSN NEQ+R Y+ +N E
Sbjct: 211 NLEKSNLNHNEQLRKYLCKNEDE 233
>AY600513-1|AAT11861.1| 314|Tribolium castaneum spalt-like protein
protein.
Length = 314
Score = 21.8 bits (44), Expect = 5.9
Identities = 7/13 (53%), Positives = 8/13 (61%)
Frame = +3
Query: 252 FKCAVCGTKLTLK 290
FKC +CG T K
Sbjct: 163 FKCKICGRAFTTK 175
>AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 21.4 bits (43), Expect = 7.8
Identities = 12/40 (30%), Positives = 19/40 (47%)
Frame = +1
Query: 376 TTPQWASEALSTCPKAITTSTNRSEDTSGTAMSQNCLRSG 495
T+P S + P TTS N S S T+ + + ++G
Sbjct: 144 TSPLSVSTSPPGKPATSTTSQNLSSPASSTSSTSSTEKAG 183
>AF452568-1|AAL57830.1| 243|Tribolium castaneum homeodomain
transcription factor Zen2 protein.
Length = 243
Score = 21.4 bits (43), Expect = 7.8
Identities = 9/30 (30%), Positives = 15/30 (50%)
Frame = +3
Query: 465 SHEPELSPIRATNGGASTRLQQGSYRVIPL 554
SHEPE+ + + G R S +++ L
Sbjct: 71 SHEPEMERPKGASNGKRARTAYTSSQLVEL 100
>AF321227-5|AAK16425.1| 292|Tribolium castaneum Zen2 protein.
Length = 292
Score = 21.4 bits (43), Expect = 7.8
Identities = 9/30 (30%), Positives = 15/30 (50%)
Frame = +3
Query: 465 SHEPELSPIRATNGGASTRLQQGSYRVIPL 554
SHEPE+ + + G R S +++ L
Sbjct: 91 SHEPEMERPKGASNGKRARTAYTSSQLVEL 120
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 177,715
Number of Sequences: 336
Number of extensions: 3908
Number of successful extensions: 15
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19571740
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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