Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= psV30465.Seq
(762 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC12B10.14c |ppk2||serine/threonine protein kinase Ppk2 |Schiz... 31 0.24
SPCC1223.10c |eaf1||RNA polymerase II transcription elongation f... 30 0.31
SPBC17D11.05 |tif32||translation initiation factor eIF3a|Schizos... 28 1.3
SPBC649.05 |cut12|stf1|spindle pole body protein Cut12 |Schizosa... 27 2.2
SPBC36.09 |sap61||U2 snRNP-associated protein sap61|Schizosaccha... 27 2.2
SPAC688.12c |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 27 2.9
SPAP11E10.02c |mam3|SPAPB1A10.01c|cell agglutination protein Mam... 27 3.9
SPBC21D10.06c |map4||cell agglutination protein Map4|Schizosacch... 27 3.9
SPAC23D3.10c |eng2||endo-1,3-beta-glucanase Eng2|Schizosaccharom... 26 5.1
SPAC25B8.08 |||conserved fungal family|Schizosaccharomyces pombe... 26 5.1
SPAC17A5.10 |||conserved fungal protein|Schizosaccharomyces pomb... 26 5.1
SPBC30D10.10c |tor1||phosphatidylinositol kinase Tor1|Schizosacc... 25 8.9
SPCPJ732.02c |||xylulose kinase |Schizosaccharomyces pombe|chr 3... 25 8.9
SPAC31A2.07c |dbp10||ATP-dependent RNA helicase Dbp10 |Schizosac... 25 8.9
>SPAC12B10.14c |ppk2||serine/threonine protein kinase Ppk2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 665
Score = 30.7 bits (66), Expect = 0.24
Identities = 23/80 (28%), Positives = 36/80 (45%), Gaps = 3/80 (3%)
Frame = +3
Query: 399 SALNVPKSNNYVNEQIRGYIR-NSHEPELSPIRATNGGAS-TRLQQGSYRVIPLTTSTGD 572
SA + P +N + I G++ SH S + + G S T +QQG PL+ S
Sbjct: 255 SAYDAPLLHNVDTQSIDGFVSVASHFSSASTAESLDDGHSATTIQQGDVSSYPLSRSVST 314
Query: 573 STP-APFHIAHALKQTELPE 629
P +P I+ A + P+
Sbjct: 315 PVPMSPISISPAKPSPQSPK 334
>SPCC1223.10c |eaf1||RNA polymerase II transcription elongation
factor SpEAF|Schizosaccharomyces pombe|chr 3|||Manual
Length = 251
Score = 30.3 bits (65), Expect = 0.31
Identities = 15/49 (30%), Positives = 24/49 (48%)
Frame = +1
Query: 394 SEALSTCPKAITTSTNRSEDTSGTAMSQNCLRSGRPTVERPRVSSKGAI 540
SE+ ST A+TT++ R ++ A ++ P +SSKG I
Sbjct: 127 SESKSTSQSAVTTNSTRRKEKELEASKDGKIKPSSSNTRYPAISSKGPI 175
>SPBC17D11.05 |tif32||translation initiation factor
eIF3a|Schizosaccharomyces pombe|chr 2|||Manual
Length = 932
Score = 28.3 bits (60), Expect = 1.3
Identities = 14/53 (26%), Positives = 23/53 (43%)
Frame = +2
Query: 485 SDPGDQRWSVHASPARELSRDTPDYQYGRFDASALPHSTRLKANRASRKPTIR 643
S P W + A +SRD+P Y G + ++P L ++ + P R
Sbjct: 874 SSPSPGAWRRGGASAGGVSRDSPRYSRGGYSRGSVPPRETLAPSKGAYVPPSR 926
>SPBC649.05 |cut12|stf1|spindle pole body protein Cut12
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 548
Score = 27.5 bits (58), Expect = 2.2
Identities = 21/64 (32%), Positives = 29/64 (45%)
Frame = +3
Query: 459 RNSHEPELSPIRATNGGASTRLQQGSYRVIPLTTSTGDSTPAPFHIAHALKQTELPESLP 638
+ SH L P +ST + S + L S TPAPF I A K++ LP L
Sbjct: 389 KKSHTTNLIPSEGII--SSTPISAASKVRMNLMQSNQTPTPAPFSI--AAKKSHLPSKLS 444
Query: 639 FGRE 650
F ++
Sbjct: 445 FPQD 448
>SPBC36.09 |sap61||U2 snRNP-associated protein
sap61|Schizosaccharomyces pombe|chr 2|||Manual
Length = 492
Score = 27.5 bits (58), Expect = 2.2
Identities = 15/54 (27%), Positives = 24/54 (44%)
Frame = +3
Query: 252 FKCAVCGTKLTLKTYYNNQHWTEDKEVYCSSHVPKIGPGHLDNSSVGIRSALNV 413
F C +CG + + ++H+TE + +Y I P L N I AL +
Sbjct: 397 FPCEICGNYVYMGRKAFDKHFTEQRHIY-GLKCLGISPSPLFNQITSIDEALQL 449
>SPAC688.12c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 167
Score = 27.1 bits (57), Expect = 2.9
Identities = 17/53 (32%), Positives = 26/53 (49%)
Frame = -2
Query: 176 KQVLS*KFGRYILLTICVHVIITNYT*FTLMLITFGFLHLTLLRCYRGSPVVC 18
K+V S GR I++ + + I+ T TL L FG L L+ ++ V C
Sbjct: 72 KEVRSNVSGREIIIKMIITFILVQTTLITLDLYVFGATGLGLILSWKLFEVAC 124
>SPAP11E10.02c |mam3|SPAPB1A10.01c|cell agglutination protein
Mam3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1082
Score = 26.6 bits (56), Expect = 3.9
Identities = 19/77 (24%), Positives = 33/77 (42%), Gaps = 1/77 (1%)
Frame = +1
Query: 244 SGCLSVPCAEPN*P*RPITITSIGRKTKKYTALATYQRSVRATWTTPQWASEALSTCPKA 423
+G + V P+ +T S+G T T + T +V TP W +E +++
Sbjct: 923 AGTVLVDIPTPSWVTETVTSGSVGFTTTIATPIGTTAGTVLVDIPTPSWVTETVTSGSVG 982
Query: 424 ITTS-TNRSEDTSGTAM 471
TT+ T+GT +
Sbjct: 983 FTTTIATPVGTTAGTVL 999
Score = 26.2 bits (55), Expect = 5.1
Identities = 19/77 (24%), Positives = 33/77 (42%), Gaps = 1/77 (1%)
Frame = +1
Query: 244 SGCLSVPCAEPN*P*RPITITSIGRKTKKYTALATYQRSVRATWTTPQWASEALSTCPKA 423
+G + V P+ +T S+G T T + T +V TP W +E +++
Sbjct: 815 AGTVLVDIPTPSWVTETVTSGSVGFTTTIATPVGTTAGTVVVDVPTPSWVTETVTSGSVG 874
Query: 424 ITTS-TNRSEDTSGTAM 471
TT+ T+GT +
Sbjct: 875 FTTTIATPIGSTAGTVL 891
Score = 26.2 bits (55), Expect = 5.1
Identities = 19/77 (24%), Positives = 33/77 (42%), Gaps = 1/77 (1%)
Frame = +1
Query: 244 SGCLSVPCAEPN*P*RPITITSIGRKTKKYTALATYQRSVRATWTTPQWASEALSTCPKA 423
+G + V P+ +T S+G T T + T +V TP W +E +++
Sbjct: 887 AGTVLVDIPTPSWVTETVTSGSVGFTTTIATPVGTTAGTVLVDIPTPSWVTETVTSGSVG 946
Query: 424 ITTS-TNRSEDTSGTAM 471
TT+ T+GT +
Sbjct: 947 FTTTIATPIGTTAGTVL 963
Score = 26.2 bits (55), Expect = 5.1
Identities = 19/77 (24%), Positives = 33/77 (42%), Gaps = 1/77 (1%)
Frame = +1
Query: 244 SGCLSVPCAEPN*P*RPITITSIGRKTKKYTALATYQRSVRATWTTPQWASEALSTCPKA 423
+G + V P+ +T S+G T T + T +V TP W +E +++
Sbjct: 959 AGTVLVDIPTPSWVTETVTSGSVGFTTTIATPVGTTAGTVLVDIPTPSWVTETVTSGSVG 1018
Query: 424 ITTS-TNRSEDTSGTAM 471
TT+ T+GT +
Sbjct: 1019 FTTTIATPIGTTAGTVL 1035
Score = 25.8 bits (54), Expect = 6.7
Identities = 16/60 (26%), Positives = 27/60 (45%), Gaps = 1/60 (1%)
Frame = +1
Query: 295 ITITSIGRKTKKYTALATYQRSVRATWTTPQWASEALSTCPKAITTS-TNRSEDTSGTAM 471
+T S+G T T + T +V TP W +E +++ TT+ T+GT +
Sbjct: 688 VTSGSVGFTTTIATPIGTTAGTVLVDIPTPSWVTETVTSGSIGFTTTIATPIGSTAGTVL 747
Score = 25.8 bits (54), Expect = 6.7
Identities = 19/77 (24%), Positives = 33/77 (42%), Gaps = 1/77 (1%)
Frame = +1
Query: 244 SGCLSVPCAEPN*P*RPITITSIGRKTKKYTALATYQRSVRATWTTPQWASEALSTCPKA 423
+G + V P+ +T SIG T T + + +V TP W +E +++
Sbjct: 707 AGTVLVDIPTPSWVTETVTSGSIGFTTTIATPIGSTAGTVLVDVPTPSWVTETVTSGSVG 766
Query: 424 ITTS-TNRSEDTSGTAM 471
TT+ T+GT +
Sbjct: 767 FTTTIATPIGSTAGTVL 783
Score = 25.8 bits (54), Expect = 6.7
Identities = 16/64 (25%), Positives = 28/64 (43%)
Frame = +1
Query: 244 SGCLSVPCAEPN*P*RPITITSIGRKTKKYTALATYQRSVRATWTTPQWASEALSTCPKA 423
+G + V P+ +T S+G T T + T +V TP W +E +++
Sbjct: 779 AGTVLVDIPTPSWVTETVTSGSVGFTTTIATPVGTTAGTVLVDIPTPSWVTETVTSGSVG 838
Query: 424 ITTS 435
TT+
Sbjct: 839 FTTT 842
>SPBC21D10.06c |map4||cell agglutination protein
Map4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 948
Score = 26.6 bits (56), Expect = 3.9
Identities = 19/77 (24%), Positives = 33/77 (42%), Gaps = 1/77 (1%)
Frame = +1
Query: 244 SGCLSVPCAEPN*P*RPITITSIGRKTKKYTALATYQRSVRATWTTPQWASEALSTCPKA 423
+G + V P+ +T S+G T T + T +V TP W +E +++
Sbjct: 714 AGTVVVDIPTPSWVTETVTSGSVGFTTTIATPIGTTAGTVLVDIPTPSWVTETVTSGSVG 773
Query: 424 ITTS-TNRSEDTSGTAM 471
TT+ T+GT +
Sbjct: 774 FTTTIATPVGTTAGTVL 790
>SPAC23D3.10c |eng2||endo-1,3-beta-glucanase
Eng2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 706
Score = 26.2 bits (55), Expect = 5.1
Identities = 14/58 (24%), Positives = 26/58 (44%)
Frame = +3
Query: 291 TYYNNQHWTEDKEVYCSSHVPKIGPGHLDNSSVGIRSALNVPKSNNYVNEQIRGYIRN 464
TYYN+ H+ +Y + + + P L N ++ +AL +N ++ RN
Sbjct: 453 TYYNDHHFHWGYHIYACAVIGLLDPSWLVNDNIRYVNALLRDSANPSESDTYFAMFRN 510
>SPAC25B8.08 |||conserved fungal family|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 590
Score = 26.2 bits (55), Expect = 5.1
Identities = 7/27 (25%), Positives = 14/27 (51%)
Frame = -3
Query: 532 PCWRRVDAPPLVARIGDSSGSWLFLMY 452
P W+ D + A + D++ W F ++
Sbjct: 117 PAWKHADYDGVAASVNDNNNDWKFFVF 143
>SPAC17A5.10 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 224
Score = 26.2 bits (55), Expect = 5.1
Identities = 19/52 (36%), Positives = 23/52 (44%), Gaps = 3/52 (5%)
Frame = +1
Query: 370 TWTTPQWASEALSTCPKAITTSTNR---SEDTSGTAMSQNCLRSGRPTVERP 516
T T+ S + ST P +S N S SG A SQ RPT +RP
Sbjct: 31 TSTSAGHPSSSSSTLPNYAASSLNSRPVSSSGSGNAYSQAPYPPARPTSQRP 82
>SPBC30D10.10c |tor1||phosphatidylinositol kinase
Tor1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 2335
Score = 25.4 bits (53), Expect = 8.9
Identities = 23/96 (23%), Positives = 43/96 (44%), Gaps = 8/96 (8%)
Frame = +3
Query: 372 LDNSSVGIRSALNVPKSNNYVNEQIRGYIRNSHEPELSPIRATNGGASTRLQQGSYRVIP 551
+ SS G + L P S++ V E+ R Y + + + + TNG + L + S +V+
Sbjct: 2231 MTKSSFGASTTLR-PTSSS-VEEKGRSYTHRARHADYAALSETNGVNAEGLNERSIQVLK 2288
Query: 552 LTTS--TG------DSTPAPFHIAHALKQTELPESL 635
++ TG + P + ++Q PE+L
Sbjct: 2289 RVSNKLTGKDFDLKEQLPVKAQVEKLIQQATAPENL 2324
>SPCPJ732.02c |||xylulose kinase |Schizosaccharomyces pombe|chr
3|||Manual
Length = 555
Score = 25.4 bits (53), Expect = 8.9
Identities = 11/39 (28%), Positives = 20/39 (51%)
Frame = +2
Query: 491 PGDQRWSVHASPARELSRDTPDYQYGRFDASALPHSTRL 607
PG R+++ + ++ +D + Y DASA+ S L
Sbjct: 393 PGTWRFAIQGTELYQVDKDEESWDYPDEDASAIVESQNL 431
>SPAC31A2.07c |dbp10||ATP-dependent RNA helicase Dbp10
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 848
Score = 25.4 bits (53), Expect = 8.9
Identities = 10/33 (30%), Positives = 17/33 (51%)
Frame = +1
Query: 559 PVREIRRQRPST*HTP*SKQSFQKAYHSAERKN 657
P+RE +R + + TP F+ YH ++N
Sbjct: 772 PIRENKRYKHNKLQTPKPADKFRDNYHKQNKRN 804
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,342,039
Number of Sequences: 5004
Number of extensions: 72013
Number of successful extensions: 203
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 184
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 203
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 365309308
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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