Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= psV30460.Seq
(755 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z72507-7|CAD56569.1| 373|Caenorhabditis elegans Hypothetical pr... 77 1e-14
Z72507-6|CAA96631.1| 398|Caenorhabditis elegans Hypothetical pr... 77 1e-14
Z72507-15|CAJ55245.1| 365|Caenorhabditis elegans Hypothetical p... 40 1e-08
AC024200-13|AAF36004.1| 214|Caenorhabditis elegans Glutathione ... 33 0.17
U42833-6|AAA83581.1| 1650|Caenorhabditis elegans Hypothetical pr... 31 0.88
Z93377-6|CAB07572.2| 254|Caenorhabditis elegans Hypothetical pr... 29 3.6
Z67756-1|CAA91762.1| 157|Caenorhabditis elegans Hypothetical pr... 29 4.7
U53333-12|AAA96165.1| 387|Caenorhabditis elegans Nuclear hormon... 29 4.7
L16622-3|ABC71837.1| 254|Caenorhabditis elegans Hypothetical pr... 28 6.2
L16622-1|ABB51198.1| 537|Caenorhabditis elegans Hypothetical pr... 28 6.2
AF025462-3|AAB71002.1| 309|Caenorhabditis elegans Hypothetical ... 28 6.2
AC024832-3|AAF59615.1| 121|Caenorhabditis elegans Hypothetical ... 28 6.2
AC024200-14|AAF36005.1| 557|Caenorhabditis elegans Hypothetical... 28 6.2
U80438-4|AAB37634.2| 1415|Caenorhabditis elegans Uncoordinated p... 28 8.2
U70618-1|AAB17088.1| 1415|Caenorhabditis elegans unc-40 protein. 28 8.2
U41015-5|AAA82310.1| 166|Caenorhabditis elegans Hypothetical pr... 28 8.2
AL033536-1|CAA22138.1| 908|Caenorhabditis elegans Hypothetical ... 28 8.2
AF016448-13|AAB65963.1| 239|Caenorhabditis elegans Hypothetical... 28 8.2
>Z72507-7|CAD56569.1| 373|Caenorhabditis elegans Hypothetical
protein F17C11.9b protein.
Length = 373
Score = 77.0 bits (181), Expect = 1e-14
Identities = 41/124 (33%), Positives = 69/124 (55%), Gaps = 1/124 (0%)
Frame = +3
Query: 264 QWASWSDSELLPASCAWVFPYLGIMQFNKQNVERAKSDLLAALKVLDGHLLTRTFLVTER 443
QW +++ LLPA +V P + F+K+ VE+ K++L L+VLD L+ +T+LV ER
Sbjct: 50 QWLQFAEGYLLPAVLGYVLPSVSAANFDKKTVEQYKNELNGQLQVLDRVLVKKTYLVGER 109
Query: 444 ITCRCHCLQY-TAACFPARARPDVRSSLINVQRWFLTVAHQPQVSAVVGSLTLCAAPPTY 620
++ + F + R S++NV RWF TV +QP V V+G ++L ++ +
Sbjct: 110 LSLADVSVALDLLPAFQYVLDANARKSIVNVTRWFRTVVNQPAVKEVLGEVSLASSVAQF 169
Query: 621 DPKK 632
+ K
Sbjct: 170 NQAK 173
>Z72507-6|CAA96631.1| 398|Caenorhabditis elegans Hypothetical
protein F17C11.9a protein.
Length = 398
Score = 77.0 bits (181), Expect = 1e-14
Identities = 41/124 (33%), Positives = 69/124 (55%), Gaps = 1/124 (0%)
Frame = +3
Query: 264 QWASWSDSELLPASCAWVFPYLGIMQFNKQNVERAKSDLLAALKVLDGHLLTRTFLVTER 443
QW +++ LLPA +V P + F+K+ VE+ K++L L+VLD L+ +T+LV ER
Sbjct: 75 QWLQFAEGYLLPAVLGYVLPSVSAANFDKKTVEQYKNELNGQLQVLDRVLVKKTYLVGER 134
Query: 444 ITCRCHCLQY-TAACFPARARPDVRSSLINVQRWFLTVAHQPQVSAVVGSLTLCAAPPTY 620
++ + F + R S++NV RWF TV +QP V V+G ++L ++ +
Sbjct: 135 LSLADVSVALDLLPAFQYVLDANARKSIVNVTRWFRTVVNQPAVKEVLGEVSLASSVAQF 194
Query: 621 DPKK 632
+ K
Sbjct: 195 NQAK 198
Score = 33.5 bits (73), Expect = 0.17
Identities = 52/171 (30%), Positives = 69/171 (40%), Gaps = 3/171 (1%)
Frame = +1
Query: 1 YTYPENFRAYKALIAAQYSGTDVKVAPNFVFGETNKSEDFLKKFPAGKVPAFESADGKVL 180
Y +NFR K LIAA+ + V +A G+ ++ KFP G PAFE G L
Sbjct: 6 YGNKDNFRTQKVLIAAKLANKTVTLA-----GDAAPAD----KFPLGVTPAFE---GDAL 53
Query: 181 LTESNAIAYYVANESLRGGDLA-TQAVSGSGHHGLTANYCLLPALGSSLTLVSCNSTNRM 357
L + +I ++ S + Q G Y L LG L VS + ++
Sbjct: 54 LFGAESIGLHLTGTSANAETVQWLQFAEG---------YLLPAVLGYVLPSVSAANFDKK 104
Query: 358 LNVQSLTYWPP*KYWTDIFSHAPSLL--PRESLADVIVFSTLLHAFQHVLD 504
Q D + L R SLADV V LL AFQ+VLD
Sbjct: 105 TVEQYKNELNGQLQVLDRVLVKKTYLVGERLSLADVSVALDLLPAFQYVLD 155
>Z72507-15|CAJ55245.1| 365|Caenorhabditis elegans Hypothetical
protein F17C11.9c protein.
Length = 365
Score = 40.3 bits (90), Expect(2) = 1e-08
Identities = 16/42 (38%), Positives = 27/42 (64%)
Frame = +3
Query: 507 DVRSSLINVQRWFLTVAHQPQVSAVVGSLTLCAAPPTYDPKK 632
+ R S++NV RWF TV +QP V V+G ++L ++ ++ K
Sbjct: 124 NARKSIVNVTRWFRTVVNQPAVKEVLGEVSLASSVAQFNQAK 165
Score = 36.7 bits (81), Expect(2) = 1e-08
Identities = 18/50 (36%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Frame = +3
Query: 264 QWASWSDSELLPASCAWVFPYLGIMQFNKQNVERAKSDLLAALK-VLDGH 410
QW +++ LLPA +V P + F+K+ VE+ K++L L+ VLD +
Sbjct: 75 QWLQFAEGYLLPAVLGYVLPSVSAANFDKKTVEQYKNELNGQLQYVLDAN 124
Score = 31.5 bits (68), Expect = 0.67
Identities = 25/75 (33%), Positives = 36/75 (48%)
Frame = +1
Query: 1 YTYPENFRAYKALIAAQYSGTDVKVAPNFVFGETNKSEDFLKKFPAGKVPAFESADGKVL 180
Y +NFR K LIAA+ + V +A G+ ++ KFP G PAFE G L
Sbjct: 6 YGNKDNFRTQKVLIAAKLANKTVTLA-----GDAAPAD----KFPLGVTPAFE---GDAL 53
Query: 181 LTESNAIAYYVANES 225
L + +I ++ S
Sbjct: 54 LFGAESIGLHLTGTS 68
>AC024200-13|AAF36004.1| 214|Caenorhabditis elegans Glutathione
s-transferase protein43 protein.
Length = 214
Score = 33.5 bits (73), Expect = 0.17
Identities = 24/72 (33%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
Frame = +1
Query: 1 YTYPENFRAYKALIAAQYSGTDVKVAPNFVFGETNKSE-DFLKKFPAGKVPAFESADGKV 177
Y+Y + A++ IA D + P +F E +K+ +F+K PA KVP +
Sbjct: 7 YSYWRSSCAWRVRIALALKNIDYEYRPIDLFSEESKNNAEFVKHNPAKKVPTL--VINGL 64
Query: 178 LLTESNAIAYYV 213
LTES AI Y+
Sbjct: 65 SLTESLAIIEYL 76
>U42833-6|AAA83581.1| 1650|Caenorhabditis elegans Hypothetical
protein ZK430.1 protein.
Length = 1650
Score = 31.1 bits (67), Expect = 0.88
Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Frame = -2
Query: 226 DFHWQRSKRWHCFQLEAPFHRHFRMQALFRQETSSR-SLRTCWSRQIRNSV 77
DF W+RSK W Q ++ R SS+ S+ TC + IR++V
Sbjct: 153 DFDWKRSKEWQFMQQFTKTETPIPFTSIARATLSSKHSIITCITDHIRHAV 203
>Z93377-6|CAB07572.2| 254|Caenorhabditis elegans Hypothetical
protein F13A7.10 protein.
Length = 254
Score = 29.1 bits (62), Expect = 3.6
Identities = 25/74 (33%), Positives = 33/74 (44%), Gaps = 6/74 (8%)
Frame = +1
Query: 10 PENFRAYKALI--AAQYS--GTDVKVAPNFVFGET--NKSEDFLKKFPAGKVPAFESADG 171
P FR Y AAQ + VK P+ V K + + K G+VP E A+G
Sbjct: 24 PNTFRIYSMRFCPAAQRALIYASVKKIPSEVININLQQKPDWYFTKNYKGQVPTLEHAEG 83
Query: 172 KVLLTESNAIAYYV 213
K L+ ES I Y+
Sbjct: 84 KKLVIESAVIPEYL 97
>Z67756-1|CAA91762.1| 157|Caenorhabditis elegans Hypothetical
protein R07A4.2 protein.
Length = 157
Score = 28.7 bits (61), Expect = 4.7
Identities = 15/44 (34%), Positives = 27/44 (61%)
Frame = -3
Query: 132 KLLQEVFGLVGLAKYEIRCYFHISPGILCGDQRFISAEVFRISV 1
K+LQ +FG + L+ CY + + CG++ F S++VF++ V
Sbjct: 22 KILQLIFGFINLSA-NYWCYPN-QHFLYCGERYFTSSQVFQLIV 63
>U53333-12|AAA96165.1| 387|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 78 protein.
Length = 387
Score = 28.7 bits (61), Expect = 4.7
Identities = 12/40 (30%), Positives = 23/40 (57%)
Frame = +3
Query: 273 SWSDSELLPASCAWVFPYLGIMQFNKQNVERAKSDLLAAL 392
S+ ++ +L A C W + + + +K+NV + KS L+ L
Sbjct: 298 SFEENAILKALCCWQTAHFKLEECDKENVRKQKSLLVQCL 337
>L16622-3|ABC71837.1| 254|Caenorhabditis elegans Hypothetical
protein C02D5.3c protein.
Length = 254
Score = 28.3 bits (60), Expect = 6.2
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = +1
Query: 106 KSEDFLKKFPAGKVPAFESADGKVLLTESNAIAYYV 213
K + F K G+VPA E +GK ++ ES I Y+
Sbjct: 62 KPDWFFTKHYKGQVPALEHDEGKKIVIESAVIPEYL 97
>L16622-1|ABB51198.1| 537|Caenorhabditis elegans Hypothetical
protein C02D5.3a protein.
Length = 537
Score = 28.3 bits (60), Expect = 6.2
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = +1
Query: 106 KSEDFLKKFPAGKVPAFESADGKVLLTESNAIAYYV 213
K + F K G+VPA E +GK ++ ES I Y+
Sbjct: 345 KPDWFFTKHYKGQVPALEHDEGKKIVIESAVIPEYL 380
>AF025462-3|AAB71002.1| 309|Caenorhabditis elegans Hypothetical
protein K10F12.4a protein.
Length = 309
Score = 28.3 bits (60), Expect = 6.2
Identities = 16/32 (50%), Positives = 21/32 (65%)
Frame = +1
Query: 118 FLKKFPAGKVPAFESADGKVLLTESNAIAYYV 213
+L K P G+VPA E +GKV + ESN I Y+
Sbjct: 138 YLPKSPIGRVPALE-INGKV-VWESNVIVEYL 167
>AC024832-3|AAF59615.1| 121|Caenorhabditis elegans Hypothetical
protein Y57E12AL.2 protein.
Length = 121
Score = 28.3 bits (60), Expect = 6.2
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = +3
Query: 315 VFPYLGIMQFNKQNVERAKSDLLAALKVLDGHLLTRTFLVTER 443
VF L ++ F +N E+ KS++LAA G TF+ T +
Sbjct: 35 VFALLAVVAFANRNPEQMKSEMLAAGVSAAGVATISTFMETHK 77
>AC024200-14|AAF36005.1| 557|Caenorhabditis elegans Hypothetical
protein Y71F9AL.4 protein.
Length = 557
Score = 28.3 bits (60), Expect = 6.2
Identities = 20/62 (32%), Positives = 30/62 (48%)
Frame = +3
Query: 174 GASN*KQCHRLLRCQ*KSPRRRSGYPSRVWQWASWSDSELLPASCAWVFPYLGIMQFNKQ 353
G S K HR+L+ K+ + S +QWASW D +P SC L ++ +K+
Sbjct: 308 GKSKDKITHRVLKVVVKATGQESKLNH--YQWASWPDHG-MPDSCDTALRLLSAVKKDKK 364
Query: 354 NV 359
V
Sbjct: 365 PV 366
>U80438-4|AAB37634.2| 1415|Caenorhabditis elegans Uncoordinated
protein 40 protein.
Length = 1415
Score = 27.9 bits (59), Expect = 8.2
Identities = 20/64 (31%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Frame = -3
Query: 606 PHRA*ASRRRPT-LAAGGRRSGTNAERLSATNGRRV*HVLESMQQCTEDNDIGK*FSR*Q 430
PH A +S RPT +AAGGR+ R +A V ++ C+ +D G+ +
Sbjct: 1292 PHSAASSSSRPTIIAAGGRQ--VPVGRATAQPRVNVANIYSPFASCSASSDAGE-SDKKS 1348
Query: 429 GRCV 418
G C+
Sbjct: 1349 GECM 1352
>U70618-1|AAB17088.1| 1415|Caenorhabditis elegans unc-40 protein.
Length = 1415
Score = 27.9 bits (59), Expect = 8.2
Identities = 20/64 (31%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Frame = -3
Query: 606 PHRA*ASRRRPT-LAAGGRRSGTNAERLSATNGRRV*HVLESMQQCTEDNDIGK*FSR*Q 430
PH A +S RPT +AAGGR+ R +A V ++ C+ +D G+ +
Sbjct: 1292 PHSAASSSSRPTIIAAGGRQ--VPVGRATAQPRVNVANIYSPFASCSASSDAGE-SDKKS 1348
Query: 429 GRCV 418
G C+
Sbjct: 1349 GECM 1352
>U41015-5|AAA82310.1| 166|Caenorhabditis elegans Hypothetical
protein F20B6.1 protein.
Length = 166
Score = 27.9 bits (59), Expect = 8.2
Identities = 20/62 (32%), Positives = 30/62 (48%)
Frame = +3
Query: 174 GASN*KQCHRLLRCQ*KSPRRRSGYPSRVWQWASWSDSELLPASCAWVFPYLGIMQFNKQ 353
G S K HR+L+ K+ + S +QWASW D +P SC L ++ +K+
Sbjct: 53 GKSKDKITHRVLKVVVKATGQESKLNH--YQWASWPDHG-MPDSCDTAHRLLSAVKKDKK 109
Query: 354 NV 359
V
Sbjct: 110 PV 111
>AL033536-1|CAA22138.1| 908|Caenorhabditis elegans Hypothetical
protein Y53C10A.4 protein.
Length = 908
Score = 27.9 bits (59), Expect = 8.2
Identities = 13/42 (30%), Positives = 25/42 (59%)
Frame = -1
Query: 554 DGQEPTLNVYQRRTDVGSSTCWKACSSVLKTMTSASDSLGNK 429
D E L VY+ ++ +S+C+ S V +T+ +++D G+K
Sbjct: 535 DDDEDELRVYRPKSSTSTSSCFARTSFVSETLKTSADD-GDK 575
>AF016448-13|AAB65963.1| 239|Caenorhabditis elegans Hypothetical
protein F41E6.1 protein.
Length = 239
Score = 27.9 bits (59), Expect = 8.2
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = -2
Query: 133 ETSSRSLRTCWSRQIRNSVLLSHQSRNIVR 44
ET +R CWSR N+V R++VR
Sbjct: 167 ETGGAIVRDCWSRVFSNAVKNPRARRDVVR 196
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,453,978
Number of Sequences: 27780
Number of extensions: 373756
Number of successful extensions: 1075
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1031
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1068
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1798543458
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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