Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= psV30456.Seq
         (478 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    22   2.5  
DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.    21   4.4  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    21   5.8  
AY052394-1|AAL15468.1|  228|Tribolium castaneum tryptophan oxyge...    21   7.7  
AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan oxyge...    21   7.7  
AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan oxyge...    21   7.7  

>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 22.2 bits (45), Expect = 2.5
 Identities = 15/60 (25%), Positives = 29/60 (48%)
 Frame = -2

Query: 447 NYIYSFSWERRRAAAFVTLMLSCWALSTNQLPLLRRDTMSDLCAVLPVLHHQDFQLFNIV 268
           N+ + F  ++     FVT  L CW+ S  ++ +L+    S  C ++      +FQ+F  +
Sbjct: 528 NFCFGFITKQLIFMIFVTYQLYCWS-SFLKISVLQSLWASPTCDLM-----YEFQIFTFL 581


>DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.
          Length = 314

 Score = 21.4 bits (43), Expect = 4.4
 Identities = 10/30 (33%), Positives = 15/30 (50%)
 Frame = +1

Query: 331 HGVSSKKRKLIRGKSPAAQHQSDECGRSPP 420
           +G SS KRK +  + P + +       SPP
Sbjct: 203 NGKSSAKRKQLVSEHPDSPNSKKSATPSPP 232


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 21.0 bits (42), Expect = 5.8
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = +2

Query: 110 RYDKLKRNWRKPRGIDNR 163
           +++ L  +W  PRG D+R
Sbjct: 631 QFNGLDVDWEYPRGADDR 648


>AY052394-1|AAL15468.1|  228|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 228

 Score = 20.6 bits (41), Expect = 7.7
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = -1

Query: 196 HQVLTLEPPADSVVNTSRFTPI 131
           HQ+LTL    DS++   R+  +
Sbjct: 129 HQILTLLMDIDSLITKWRYNHV 150


>AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 20.6 bits (41), Expect = 7.7
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = -1

Query: 196 HQVLTLEPPADSVVNTSRFTPI 131
           HQ+LTL    DS++   R+  +
Sbjct: 289 HQILTLLMDIDSLITKWRYNHV 310


>AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 20.6 bits (41), Expect = 7.7
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = -1

Query: 196 HQVLTLEPPADSVVNTSRFTPI 131
           HQ+LTL    DS++   R+  +
Sbjct: 289 HQILTLLMDIDSLITKWRYNHV 310


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 104,030
Number of Sequences: 336
Number of extensions: 2074
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 11141978
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)