Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= psV30456.Seq
         (478 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954256-9|CAJ14150.1|  872|Anopheles gambiae putative calcium/c...    25   1.8  
AB090815-2|BAC57906.1|  973|Anopheles gambiae reverse transcript...    24   2.4  
AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            23   4.1  
AB090814-1|BAC57903.1|  499|Anopheles gambiae gag-like protein p...    23   5.5  
AY659930-1|AAT51798.2|  144|Anopheles gambiae lysozyme c-3 protein.    22   9.6  

>CR954256-9|CAJ14150.1|  872|Anopheles gambiae putative
           calcium/calmodulin-dependentprotein kinase, CAKI
           protein.
          Length = 872

 Score = 24.6 bits (51), Expect = 1.8
 Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 4/56 (7%)
 Frame = -1

Query: 190 VLTLEPPADSVVNTSRFTPIPLKFVIAIRLMP----DKSLRPLFDDCRPVNRSYSH 35
           +L +EP A  ++ T+ FTP  + F+ A  L      D SL  L  +   + ++Y H
Sbjct: 787 ILDVEPQALKILRTAEFTPY-VVFIAAPLLQNIADYDGSLERLAKESDMLRQAYGH 841


>AB090815-2|BAC57906.1|  973|Anopheles gambiae reverse transcriptase
           protein.
          Length = 973

 Score = 24.2 bits (50), Expect = 2.4
 Identities = 16/50 (32%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
 Frame = +1

Query: 229 PSYAPKWIPKVLVHN-VKELEILMMQNRKYCAEIAHGVSSKKRKLIRGKS 375
           P  A    P  L+ N  K LEIL++       E  HG+S ++    +G+S
Sbjct: 464 PDDASALRPLALIDNFAKILEILILNRLVVYTEGEHGLSDRQFGFRKGRS 513


>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 23.4 bits (48), Expect = 4.1
 Identities = 10/23 (43%), Positives = 14/23 (60%), Gaps = 1/23 (4%)
 Frame = -3

Query: 254  GIHLGAYDGSSCWNRNQC-WASS 189
            G +LGA   ++CWN  +  W SS
Sbjct: 2749 GAYLGAASANNCWNPLKWDWRSS 2771


>AB090814-1|BAC57903.1|  499|Anopheles gambiae gag-like protein
           protein.
          Length = 499

 Score = 23.0 bits (47), Expect = 5.5
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = +3

Query: 195 CPTLVTVPTRRPVICSQMD 251
           CP  + +P+RR   C Q D
Sbjct: 420 CPVRINIPSRRCYRCWQTD 438


>AY659930-1|AAT51798.2|  144|Anopheles gambiae lysozyme c-3 protein.
          Length = 144

 Score = 22.2 bits (45), Expect = 9.6
 Identities = 13/51 (25%), Positives = 21/51 (41%)
 Frame = +1

Query: 199 QHWLRFQQEDPSYAPKWIPKVLVHNVKELEILMMQNRKYCAEIAHGVSSKK 351
           Q W+   Q +  Y    + K   +  K+  I  + N  +CAE   G +  K
Sbjct: 41  QDWICLIQNESRYDTSALNKKNWNGSKDYGIFQINNYYWCAEGKVGANECK 91


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 467,167
Number of Sequences: 2352
Number of extensions: 9540
Number of successful extensions: 15
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 42095889
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)