Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= psV30456.Seq
         (478 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z68338-1|CAA92757.1|  134|Caenorhabditis elegans Hypothetical pr...   107   5e-24
Z81115-2|CAB03292.1|  314|Caenorhabditis elegans Hypothetical pr...    30   0.99 
U41554-3|AAA83298.2|  745|Caenorhabditis elegans Nematode astaci...    28   4.0  
U39645-5|AAU05591.1|  345|Caenorhabditis elegans Hypothetical pr...    27   5.3  
U39645-4|AAU05592.1|  341|Caenorhabditis elegans Hypothetical pr...    27   5.3  
Z75712-8|CAB00047.1|  319|Caenorhabditis elegans Hypothetical pr...    27   9.2  
Z71264-2|CAA95830.1| 1202|Caenorhabditis elegans Hypothetical pr...    27   9.2  
U43375-1|AAA83618.1|  709|Caenorhabditis elegans Sulfatase domai...    27   9.2  

>Z68338-1|CAA92757.1|  134|Caenorhabditis elegans Hypothetical
           protein T24B8.1 protein.
          Length = 134

 Score =  107 bits (256), Expect = 5e-24
 Identities = 54/124 (43%), Positives = 80/124 (64%)
 Frame = +2

Query: 65  IVKKRTKRFIRHQSDRYDKLKRNWRKPRGIDNRVRRRFKGQYLMPNIGYGSNKKTRHMLP 244
           +VKK+  +F RH+SDRY ++  +WRKP+GIDNRVRRRF+G   MP IG+GS+++TR +LP
Sbjct: 11  VVKKKLTKFKRHESDRYRRVAPSWRKPKGIDNRVRRRFRGMRAMPTIGHGSDRRTRFVLP 70

Query: 245 NGFLRS*FTMLKSWKS**CKTGSTAQRSLMVSLRRSGS*FVERAQQLSIRVTNAAARLRS 424
           NG+ +     +K       ++             +S    VERA QL+I++TN  ARLR+
Sbjct: 71  NGYKKVLVQNVKDLDMLLMQSYKYIGEIGHGVSAKSRKGIVERAAQLNIKLTNGNARLRT 130

Query: 425 QENE 436
           +E+E
Sbjct: 131 EESE 134



 Score = 51.2 bits (117), Expect = 4e-07
 Identities = 23/39 (58%), Positives = 29/39 (74%)
 Frame = +1

Query: 241 PKWIPKVLVHNVKELEILMMQNRKYCAEIAHGVSSKKRK 357
           P    KVLV NVK+L++L+MQ+ KY  EI HGVS+K RK
Sbjct: 70  PNGYKKVLVQNVKDLDMLLMQSYKYIGEIGHGVSAKSRK 108


>Z81115-2|CAB03292.1|  314|Caenorhabditis elegans Hypothetical
           protein T05D4.2 protein.
          Length = 314

 Score = 29.9 bits (64), Expect = 0.99
 Identities = 14/43 (32%), Positives = 21/43 (48%)
 Frame = +1

Query: 304 NRKYCAEIAHGVSSKKRKLIRGKSPAAQHQSDECGRSPPLPGE 432
           N   C EIA  + S+ R  ++G     ++Q      +PP PGE
Sbjct: 55  NHCQCYEIAVDICSEPRVRVKGLDRCWEYQIQSTVNAPPTPGE 97


>U41554-3|AAA83298.2|  745|Caenorhabditis elegans Nematode astacin
           protease protein38 protein.
          Length = 745

 Score = 27.9 bits (59), Expect = 4.0
 Identities = 12/30 (40%), Positives = 14/30 (46%)
 Frame = -1

Query: 424 GAEASGRIRHSDAELLGSFHESASASSKRH 335
           G +  G I H     LG FHE A    +RH
Sbjct: 198 GCDVVGIISHEIGHALGIFHEQARPDQERH 227


>U39645-5|AAU05591.1|  345|Caenorhabditis elegans Hypothetical
           protein C14F11.4a protein.
          Length = 345

 Score = 27.5 bits (58), Expect = 5.3
 Identities = 18/65 (27%), Positives = 31/65 (47%), Gaps = 2/65 (3%)
 Frame = +2

Query: 53  YRPTIVKKRT--KRFIRHQSDRYDKLKRNWRKPRGIDNRVRRRFKGQYLMPNIGYGSNKK 226
           Y P + KK    +RFI   ++R+D + RN   P     R  +  + Q L+ +  Y S+ +
Sbjct: 4   YPPLVTKKEIIYRRFIDDHNERFDNIVRN---PTSYPPRAPKPERPQNLVVSHNYHSDVE 60

Query: 227 TRHML 241
             + L
Sbjct: 61  AEYQL 65


>U39645-4|AAU05592.1|  341|Caenorhabditis elegans Hypothetical
           protein C14F11.4b protein.
          Length = 341

 Score = 27.5 bits (58), Expect = 5.3
 Identities = 18/65 (27%), Positives = 31/65 (47%), Gaps = 2/65 (3%)
 Frame = +2

Query: 53  YRPTIVKKRT--KRFIRHQSDRYDKLKRNWRKPRGIDNRVRRRFKGQYLMPNIGYGSNKK 226
           Y P + KK    +RFI   ++R+D + RN   P     R  +  + Q L+ +  Y S+ +
Sbjct: 4   YPPLVTKKEIIYRRFIDDHNERFDNIVRN---PTSYPPRAPKPERPQNLVVSHNYHSDVE 60

Query: 227 TRHML 241
             + L
Sbjct: 61  AEYQL 65


>Z75712-8|CAB00047.1|  319|Caenorhabditis elegans Hypothetical
           protein K04G2.10 protein.
          Length = 319

 Score = 26.6 bits (56), Expect = 9.2
 Identities = 14/35 (40%), Positives = 21/35 (60%)
 Frame = +1

Query: 31  QDGYKTCLQADNRQKEDEEIYQASIGSL*QT*EEL 135
           QD  K   + D+RQKE  E Y+  IGS+ +  E++
Sbjct: 238 QDMVKYMEENDDRQKESIEKYKRKIGSMKKVIEKM 272


>Z71264-2|CAA95830.1| 1202|Caenorhabditis elegans Hypothetical protein
            K07G5.3 protein.
          Length = 1202

 Score = 26.6 bits (56), Expect = 9.2
 Identities = 13/51 (25%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
 Frame = -1

Query: 178  EPPADSVVN-TSRFTPIPLKFVIAIRLMPDKSLRPLFDDCRPVNRSYSHLV 29
            E P +S+   T R++ +P  +++ +R+  ++ ++  FD+ R       HLV
Sbjct: 1058 EEPLESIQTATVRYSKLPEDWIVELRISLEREIKIRFDESRKHAIPQWHLV 1108


>U43375-1|AAA83618.1|  709|Caenorhabditis elegans Sulfatase domain
           protein protein 1 protein.
          Length = 709

 Score = 26.6 bits (56), Expect = 9.2
 Identities = 16/53 (30%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
 Frame = +2

Query: 20  KETYKMAIRPVYRPTIVKKRTKR-FIRHQSDRYDKLKRNWRKPRGIDNRVRRR 175
           K+ +  A++P +R TI+ +R K   ++   DRY K K+ + K   +    +RR
Sbjct: 387 KKKHMTALKP-WRDTILIERGKMPKLKKIRDRYIKQKKKFNKENRLSKECKRR 438


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,291,973
Number of Sequences: 27780
Number of extensions: 206202
Number of successful extensions: 668
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 648
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 668
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 871571276
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)