Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= psV30453.Seq
         (788 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    25   0.52 
AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory recept...    25   0.69 
AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory recept...    25   0.69 
EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4 prot...    25   0.91 
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    23   2.8  
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    22   4.9  
DQ855494-1|ABH88181.1|   99|Tribolium castaneum chemosensory pro...    22   6.4  
AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory recept...    21   8.5  

>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 25.4 bits (53), Expect = 0.52
 Identities = 16/70 (22%), Positives = 24/70 (34%)
 Frame = +1

Query: 31  GLPXRHQGLVRSQVPHTWNYSALHVHESVQSWRHCRHQRQWCSSKGYATQSIPWKDRSRV 210
           G   R    + S +  T +Y+ +   E + SWR     +      G      P    S V
Sbjct: 485 GQSFRSLAEMTSHMQQTQHYTNIISQEQIISWRSSDDAKGGGGGSGSGNNQPPGGPSSHV 544

Query: 211 QRDCSCSRCD 240
               +C  CD
Sbjct: 545 SAVLTCKVCD 554


>AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory receptor
           candidate 18 protein.
          Length = 387

 Score = 25.0 bits (52), Expect = 0.69
 Identities = 14/48 (29%), Positives = 22/48 (45%)
 Frame = -2

Query: 253 TLVDNHTESMSSHVVHATCLSMVYFVWHTLLNCTIASDVYNVSNFVHF 110
           TLV  H+  +++        S+   VW +L+   +  D Y V N V F
Sbjct: 219 TLVQMHSNLVTTSEEVCDSFSIFGLVWISLIFVVLIGDAYAVLNSVLF 266


>AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory receptor
           candidate 17 protein.
          Length = 372

 Score = 25.0 bits (52), Expect = 0.69
 Identities = 14/48 (29%), Positives = 22/48 (45%)
 Frame = -2

Query: 253 TLVDNHTESMSSHVVHATCLSMVYFVWHTLLNCTIASDVYNVSNFVHF 110
           TLV  H+  +++        S+   VW +L+   +  D Y V N V F
Sbjct: 219 TLVQMHSNLVTTSEEVCDSFSIFGLVWISLIFVVLIGDAYAVLNSVLF 266


>EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4
           protein.
          Length = 475

 Score = 24.6 bits (51), Expect = 0.91
 Identities = 11/32 (34%), Positives = 15/32 (46%)
 Frame = +1

Query: 31  GLPXRHQGLVRSQVPHTWNYSALHVHESVQSW 126
           G+   H GL  S V  T N   L V  +++ W
Sbjct: 215 GVTGHHSGLYPSAVDTTTNQKLLTVDAAIRGW 246


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = +2

Query: 173 PHKVYHGKTGR 205
           PH  Y GKTGR
Sbjct: 302 PHPTYFGKTGR 312


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 22.2 bits (45), Expect = 4.9
 Identities = 8/19 (42%), Positives = 12/19 (63%), Gaps = 1/19 (5%)
 Frame = +1

Query: 73  PHT-WNYSALHVHESVQSW 126
           PH  W Y  L+V++ +Q W
Sbjct: 234 PHDQWAYEKLNVNDGLQLW 252


>DQ855494-1|ABH88181.1|   99|Tribolium castaneum chemosensory
           protein 8 protein.
          Length = 99

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 7/23 (30%), Positives = 12/23 (52%)
 Frame = +1

Query: 223 SCSRCDCQQACRGRIIPKRINIR 291
           +C RCD +Q    R I + +  +
Sbjct: 63  NCERCDSRQVANARRIARYVQTK 85


>AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory receptor
           candidate 16 protein.
          Length = 452

 Score = 21.4 bits (43), Expect = 8.5
 Identities = 13/53 (24%), Positives = 21/53 (39%)
 Frame = -2

Query: 250 LVDNHTESMSSHVVHATCLSMVYFVWHTLLNCTIASDVYNVSNFVHFHVRGER 92
           LV+ H   +     H +  S+   +W T+    +  D Y V     FH+   R
Sbjct: 233 LVNLHKNLVKVAKDHNSLYSLHLLLWITVTFILLVGDSYIVMYVFFFHLSDVR 285


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 169,057
Number of Sequences: 336
Number of extensions: 3346
Number of successful extensions: 12
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21376414
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)