Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= psV30446.Seq
         (786 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase prot...    29   0.065
X72577-1|CAA51169.1|  283|Apis mellifera Apidaecin precursor pro...    21   9.8  
AF442148-1|AAL35349.1|  199|Apis mellifera apidaecin precursor p...    21   9.8  

>AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase
           protein.
          Length = 693

 Score = 28.7 bits (61), Expect = 0.065
 Identities = 12/22 (54%), Positives = 16/22 (72%)
 Frame = -3

Query: 340 SRARDDVSPVAVGARVPARLPR 275
           SRAR++ + V  GARVP  +PR
Sbjct: 162 SRAREEANVVPEGARVPIEIPR 183


>X72577-1|CAA51169.1|  283|Apis mellifera Apidaecin precursor
           protein.
          Length = 283

 Score = 21.4 bits (43), Expect = 9.8
 Identities = 10/32 (31%), Positives = 11/32 (34%)
 Frame = +1

Query: 667 PAPGEPXXRRXXKRRXYPGKXXSFEVXXKLPP 762
           P P  P  RR  K    PG      +    PP
Sbjct: 248 PRPPHPRLRREAKPEAKPGNNRPVYIPQPRPP 279


>AF442148-1|AAL35349.1|  199|Apis mellifera apidaecin precursor
           protein.
          Length = 199

 Score = 21.4 bits (43), Expect = 9.8
 Identities = 10/32 (31%), Positives = 11/32 (34%)
 Frame = +1

Query: 667 PAPGEPXXRRXXKRRXYPGKXXSFEVXXKLPP 762
           P P  P  RR  K    PG      +    PP
Sbjct: 136 PRPPHPRLRREAKPEAEPGNNRPVYIPQPRPP 167


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 104,850
Number of Sequences: 438
Number of extensions: 1552
Number of successful extensions: 6
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24760908
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)