Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= psV30444.Seq
         (612 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/T...    25   1.5  
AF510719-1|AAP47148.1|  591|Anopheles gambiae ammonium transport...    24   3.4  
AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcript...    24   3.4  
M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.           23   5.9  

>AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/Thr
            phosphatase protein.
          Length = 1977

 Score = 25.4 bits (53), Expect = 1.5
 Identities = 12/28 (42%), Positives = 16/28 (57%)
 Frame = +3

Query: 276  QLTVQNRQAQIAVVPSAAALIIRALKEP 359
            QL  + RQ ++AV PS+  L   A K P
Sbjct: 1610 QLLERTRQKRMAVCPSSVVLAREAFKHP 1637


>AF510719-1|AAP47148.1|  591|Anopheles gambiae ammonium
           transport-like protein protein.
          Length = 591

 Score = 24.2 bits (50), Expect = 3.4
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = -1

Query: 69  TIITLNPNGWVWIPQGYRLNV 7
           TI+   P GWVW   G+  N+
Sbjct: 169 TIVYCIPAGWVWGEHGFLKNL 189


>AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1022

 Score = 24.2 bits (50), Expect = 3.4
 Identities = 12/30 (40%), Positives = 18/30 (60%)
 Frame = -3

Query: 487 SFTEPERYRAIDLFLMIFAMPITSSREMLP 398
           +F  PER  AIDL  +  ++  T+  E+LP
Sbjct: 165 TFVTPERKSAIDLTFVSQSLMETTGWEVLP 194


>M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.
          Length = 1212

 Score = 23.4 bits (48), Expect = 5.9
 Identities = 12/33 (36%), Positives = 15/33 (45%)
 Frame = -1

Query: 594  KHLFINGQTPLLMSSIRSCGGLPSTVHPTTVLC 496
            ++L ING T       RSC G+P   H     C
Sbjct: 995  EYLAINGFTE--SPDCRSCAGVPENAHHAIFEC 1025


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 676,115
Number of Sequences: 2352
Number of extensions: 13772
Number of successful extensions: 19
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 59711994
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)