Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= psV30441.Seq
(738 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT001649-1|AAN71404.1| 601|Drosophila melanogaster RE43755p pro... 98 1e-20
AE014298-960|AAF46204.1| 601|Drosophila melanogaster CG3075-PA ... 98 1e-20
BT022745-1|AAY55161.1| 155|Drosophila melanogaster IP14609p pro... 52 8e-07
AE013599-3393|AAF46843.1| 155|Drosophila melanogaster CG11301-P... 52 8e-07
AY118858-1|AAM50718.1| 133|Drosophila melanogaster GM21739p pro... 52 1e-06
AY118935-1|AAM50795.1| 341|Drosophila melanogaster LD24434p pro... 39 0.006
AF302258-1|AAG15389.1| 341|Drosophila melanogaster NC2alpha pro... 39 0.006
AE013599-3251|AAF46749.2| 341|Drosophila melanogaster CG10318-P... 39 0.006
AY113515-1|AAM29520.1| 140|Drosophila melanogaster RE59557p pro... 33 0.31
AJ271142-1|CAB70603.1| 140|Drosophila melanogaster histone-fold... 33 0.31
AE014298-1740|AAF48131.1| 140|Drosophila melanogaster CG15736-P... 33 0.31
AE014297-3252|AAF56081.1| 424|Drosophila melanogaster CG6688-PA... 30 3.8
BT016082-1|AAV36967.1| 568|Drosophila melanogaster LD47465p pro... 29 5.0
AY070520-1|AAL47991.1| 507|Drosophila melanogaster GH23534p pro... 29 5.0
AE014297-2300|AAX52959.1| 568|Drosophila melanogaster CG5201-PC... 29 5.0
AE014297-2299|AAF55383.1| 568|Drosophila melanogaster CG5201-PB... 29 5.0
AE014297-2298|AAN13728.1| 568|Drosophila melanogaster CG5201-PA... 29 5.0
AB004232-1|BAA22841.1| 568|Drosophila melanogaster DAD polypept... 29 5.0
>BT001649-1|AAN71404.1| 601|Drosophila melanogaster RE43755p
protein.
Length = 601
Score = 97.9 bits (233), Expect = 1e-20
Identities = 43/73 (58%), Positives = 52/73 (71%)
Frame = +1
Query: 292 TLQQFWDKVLEDIQKVNSEDFKTQALPLARIKKIMKLDEEVKMISAEAPVLFAKAAEIFI 471
T+ FW ++ ++ + D K Q LPLARIKKIMKLDE KMI+ EAP+LFAKA E FI
Sbjct: 129 TIDNFWPNIVSEVHSIGQVDAKHQVLPLARIKKIMKLDENAKMIAGEAPLLFAKACEYFI 188
Query: 472 HELTLRAWSHTEE 510
ELT+ AW HTEE
Sbjct: 189 QELTMHAWVHTEE 201
Score = 39.1 bits (87), Expect = 0.006
Identities = 16/25 (64%), Positives = 20/25 (80%)
Frame = +2
Query: 542 SDSILKSDQFDFLIDIVPRHEVKPT 616
+ +I DQFDFLIDIVPR E+KP+
Sbjct: 213 AQAIANYDQFDFLIDIVPREEIKPS 237
>AE014298-960|AAF46204.1| 601|Drosophila melanogaster CG3075-PA
protein.
Length = 601
Score = 97.9 bits (233), Expect = 1e-20
Identities = 43/73 (58%), Positives = 52/73 (71%)
Frame = +1
Query: 292 TLQQFWDKVLEDIQKVNSEDFKTQALPLARIKKIMKLDEEVKMISAEAPVLFAKAAEIFI 471
T+ FW ++ ++ + D K Q LPLARIKKIMKLDE KMI+ EAP+LFAKA E FI
Sbjct: 129 TIDNFWPNIVSEVHSIGQVDAKHQVLPLARIKKIMKLDENAKMIAGEAPLLFAKACEYFI 188
Query: 472 HELTLRAWSHTEE 510
ELT+ AW HTEE
Sbjct: 189 QELTMHAWVHTEE 201
Score = 39.1 bits (87), Expect = 0.006
Identities = 16/25 (64%), Positives = 20/25 (80%)
Frame = +2
Query: 542 SDSILKSDQFDFLIDIVPRHEVKPT 616
+ +I DQFDFLIDIVPR E+KP+
Sbjct: 213 AQAIANYDQFDFLIDIVPREEIKPS 237
>BT022745-1|AAY55161.1| 155|Drosophila melanogaster IP14609p
protein.
Length = 155
Score = 52.0 bits (119), Expect = 8e-07
Identities = 28/76 (36%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
Frame = +1
Query: 292 TLQQFWDKVLEDIQKVNSE-DFKTQALPLARIKKIMKLDEEVKMISAEAPVLFAKAAEIF 468
T +Q +K + + K ++ + K LPLARI+ IMKLD ++ M + EA + AKA E+F
Sbjct: 52 TTEQLTEKPVTNGNKAPADNEAKMTQLPLARIRNIMKLDPDLHMANNEAVFIVAKAVELF 111
Query: 469 IHELTLRAWSHTEEIK 516
I L+ ++++T + K
Sbjct: 112 IASLSRESYTYTAQSK 127
>AE013599-3393|AAF46843.1| 155|Drosophila melanogaster CG11301-PA
protein.
Length = 155
Score = 52.0 bits (119), Expect = 8e-07
Identities = 28/76 (36%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
Frame = +1
Query: 292 TLQQFWDKVLEDIQKVNSE-DFKTQALPLARIKKIMKLDEEVKMISAEAPVLFAKAAEIF 468
T +Q +K + + K ++ + K LPLARI+ IMKLD ++ M + EA + AKA E+F
Sbjct: 52 TTEQLTEKPVTNGNKAPADNEAKMTQLPLARIRNIMKLDPDLHMANNEAVFIVAKAVELF 111
Query: 469 IHELTLRAWSHTEEIK 516
I L+ ++++T + K
Sbjct: 112 IASLSRESYTYTAQSK 127
>AY118858-1|AAM50718.1| 133|Drosophila melanogaster GM21739p
protein.
Length = 133
Score = 51.6 bits (118), Expect = 1e-06
Identities = 28/76 (36%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
Frame = +1
Query: 292 TLQQFWDKVLEDIQKVNSE-DFKTQALPLARIKKIMKLDEEVKMISAEAPVLFAKAAEIF 468
T +Q +K + + K ++ + K LPLARI+ IMKLD ++ M + EA + AKA E+F
Sbjct: 30 TTEQLAEKPVTNGNKAPADNEAKMTQLPLARIRNIMKLDPDLHMANNEAVFIVAKAVELF 89
Query: 469 IHELTLRAWSHTEEIK 516
I L+ ++++T + K
Sbjct: 90 IASLSRESYTYTAQSK 105
>AY118935-1|AAM50795.1| 341|Drosophila melanogaster LD24434p
protein.
Length = 341
Score = 39.1 bits (87), Expect = 0.006
Identities = 22/69 (31%), Positives = 34/69 (49%)
Frame = +1
Query: 370 PLARIKKIMKLDEEVKMISAEAPVLFAKAAEIFIHELTLRAWSHTEEIKXGLCSATT*RQ 549
P RIKKIM+ DEE+ ++ PV+ ++ E+F+ L + T S + RQ
Sbjct: 13 PAGRIKKIMQSDEEIGKVAQAVPVIISRTLELFVESLLTKTLRITNARNAKTLSPSHMRQ 72
Query: 550 YIEIGSVRF 576
I + RF
Sbjct: 73 CI-VSEKRF 80
>AF302258-1|AAG15389.1| 341|Drosophila melanogaster NC2alpha
protein.
Length = 341
Score = 39.1 bits (87), Expect = 0.006
Identities = 22/69 (31%), Positives = 34/69 (49%)
Frame = +1
Query: 370 PLARIKKIMKLDEEVKMISAEAPVLFAKAAEIFIHELTLRAWSHTEEIKXGLCSATT*RQ 549
P RIKKIM+ DEE+ ++ PV+ ++ E+F+ L + T S + RQ
Sbjct: 13 PAGRIKKIMQSDEEIGKVAQAVPVIISRTLELFVESLLTKTLRITNARNAKTLSPSHMRQ 72
Query: 550 YIEIGSVRF 576
I + RF
Sbjct: 73 CI-VSEKRF 80
>AE013599-3251|AAF46749.2| 341|Drosophila melanogaster CG10318-PA,
isoform A protein.
Length = 341
Score = 39.1 bits (87), Expect = 0.006
Identities = 22/69 (31%), Positives = 34/69 (49%)
Frame = +1
Query: 370 PLARIKKIMKLDEEVKMISAEAPVLFAKAAEIFIHELTLRAWSHTEEIKXGLCSATT*RQ 549
P RIKKIM+ DEE+ ++ PV+ ++ E+F+ L + T S + RQ
Sbjct: 13 PAGRIKKIMQSDEEIGKVAQAVPVIISRTLELFVESLLTKTLRITNARNAKTLSPSHMRQ 72
Query: 550 YIEIGSVRF 576
I + RF
Sbjct: 73 CI-VSEKRF 80
>AY113515-1|AAM29520.1| 140|Drosophila melanogaster RE59557p
protein.
Length = 140
Score = 33.5 bits (73), Expect = 0.31
Identities = 18/48 (37%), Positives = 27/48 (56%)
Frame = +1
Query: 367 LPLARIKKIMKLDEEVKMISAEAPVLFAKAAEIFIHELTLRAWSHTEE 510
LPL+R++ IMK + +I+ E L K E+F+ L A +TEE
Sbjct: 20 LPLSRVRTIMKSSMDTGLITNEVLFLMTKCTELFVRHLAGAA--YTEE 65
>AJ271142-1|CAB70603.1| 140|Drosophila melanogaster histone-fold
protein CHRAC subunit protein.
Length = 140
Score = 33.5 bits (73), Expect = 0.31
Identities = 18/48 (37%), Positives = 27/48 (56%)
Frame = +1
Query: 367 LPLARIKKIMKLDEEVKMISAEAPVLFAKAAEIFIHELTLRAWSHTEE 510
LPL+R++ IMK + +I+ E L K E+F+ L A +TEE
Sbjct: 20 LPLSRVRTIMKSSMDTGLITNEVLFLMTKCTELFVRHLAGAA--YTEE 65
>AE014298-1740|AAF48131.1| 140|Drosophila melanogaster CG15736-PA
protein.
Length = 140
Score = 33.5 bits (73), Expect = 0.31
Identities = 18/48 (37%), Positives = 27/48 (56%)
Frame = +1
Query: 367 LPLARIKKIMKLDEEVKMISAEAPVLFAKAAEIFIHELTLRAWSHTEE 510
LPL+R++ IMK + +I+ E L K E+F+ L A +TEE
Sbjct: 20 LPLSRVRTIMKSSMDTGLITNEVLFLMTKCTELFVRHLAGAA--YTEE 65
>AE014297-3252|AAF56081.1| 424|Drosophila melanogaster CG6688-PA
protein.
Length = 424
Score = 29.9 bits (64), Expect = 3.8
Identities = 15/28 (53%), Positives = 20/28 (71%)
Frame = -1
Query: 315 FVPELLEGLCAASAEDSSPANQRPLLRT 232
F+ +LLEG CA S ++ SP+N LLRT
Sbjct: 247 FLTKLLEG-CAYSTDNLSPSNAATLLRT 273
>BT016082-1|AAV36967.1| 568|Drosophila melanogaster LD47465p
protein.
Length = 568
Score = 29.5 bits (63), Expect = 5.0
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = -2
Query: 374 NGKAWVLKSSELTFCMSSKTLSQNCWRVC 288
NG W+ T + S TLS+N RVC
Sbjct: 471 NGDVWIYNRGNTTIFVDSPTLSENLDRVC 499
>AY070520-1|AAL47991.1| 507|Drosophila melanogaster GH23534p
protein.
Length = 507
Score = 29.5 bits (63), Expect = 5.0
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = -2
Query: 374 NGKAWVLKSSELTFCMSSKTLSQNCWRVC 288
NG W+ T + S TLS+N RVC
Sbjct: 410 NGDVWIYNRGNTTIFVDSPTLSENLDRVC 438
>AE014297-2300|AAX52959.1| 568|Drosophila melanogaster CG5201-PC,
isoform C protein.
Length = 568
Score = 29.5 bits (63), Expect = 5.0
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = -2
Query: 374 NGKAWVLKSSELTFCMSSKTLSQNCWRVC 288
NG W+ T + S TLS+N RVC
Sbjct: 471 NGDVWIYNRGNTTIFVDSPTLSENLDRVC 499
>AE014297-2299|AAF55383.1| 568|Drosophila melanogaster CG5201-PB,
isoform B protein.
Length = 568
Score = 29.5 bits (63), Expect = 5.0
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = -2
Query: 374 NGKAWVLKSSELTFCMSSKTLSQNCWRVC 288
NG W+ T + S TLS+N RVC
Sbjct: 471 NGDVWIYNRGNTTIFVDSPTLSENLDRVC 499
>AE014297-2298|AAN13728.1| 568|Drosophila melanogaster CG5201-PA,
isoform A protein.
Length = 568
Score = 29.5 bits (63), Expect = 5.0
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = -2
Query: 374 NGKAWVLKSSELTFCMSSKTLSQNCWRVC 288
NG W+ T + S TLS+N RVC
Sbjct: 471 NGDVWIYNRGNTTIFVDSPTLSENLDRVC 499
>AB004232-1|BAA22841.1| 568|Drosophila melanogaster DAD polypeptide
protein.
Length = 568
Score = 29.5 bits (63), Expect = 5.0
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = -2
Query: 374 NGKAWVLKSSELTFCMSSKTLSQNCWRVC 288
NG W+ T + S TLS+N RVC
Sbjct: 471 NGDVWIYNRGNTTIFVDSPTLSENLDRVC 499
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,487,378
Number of Sequences: 53049
Number of extensions: 668829
Number of successful extensions: 1669
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1575
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1669
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3334818762
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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