Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= psV30441.Seq
(738 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 26 0.32
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 26 0.32
DQ232888-1|ABB36783.1| 499|Apis mellifera cytochrome P450 monoo... 22 5.2
DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex det... 21 9.1
DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex det... 21 9.1
DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex det... 21 9.1
DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex det... 21 9.1
DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex det... 21 9.1
DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex det... 21 9.1
DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex det... 21 9.1
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 26.2 bits (55), Expect = 0.32
Identities = 13/41 (31%), Positives = 17/41 (41%)
Frame = -2
Query: 293 VCAPPQRRTPHRQISVHFFGRGNRRCLFGRHKEAHGHFVVF 171
V AP +SVH G RC H +A HF+ +
Sbjct: 327 VTAPLHVEVTPPLLSVHLGGNAEFRCEVSTHPQAGPHFITW 367
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 26.2 bits (55), Expect = 0.32
Identities = 13/41 (31%), Positives = 17/41 (41%)
Frame = -2
Query: 293 VCAPPQRRTPHRQISVHFFGRGNRRCLFGRHKEAHGHFVVF 171
V AP +SVH G RC H +A HF+ +
Sbjct: 327 VTAPLHVEVTPPLLSVHLGGNAEFRCEVSTHPQAGPHFITW 367
>DQ232888-1|ABB36783.1| 499|Apis mellifera cytochrome P450
monooxygenase protein.
Length = 499
Score = 22.2 bits (45), Expect = 5.2
Identities = 8/19 (42%), Positives = 14/19 (73%)
Frame = -1
Query: 378 SQRQSLGLEVFGINFLYVL 322
S+ + +G EVF +NF+ V+
Sbjct: 203 SEFRRMGREVFAVNFMNVM 221
>DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 9.1
Identities = 12/48 (25%), Positives = 20/48 (41%)
Frame = -2
Query: 152 QTHRCFYSIITQN*YLNYVLVNYSKFRKQYKHGNQ*SEYYLEISNRQL 9
+ RC I + NY NY+ + Y + +YY I+ Q+
Sbjct: 72 ERERCKEPKIISSLSNNYKYSNYNNYNNNYNTNYKKLQYYNIINIEQI 119
>DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 9.1
Identities = 12/48 (25%), Positives = 20/48 (41%)
Frame = -2
Query: 152 QTHRCFYSIITQN*YLNYVLVNYSKFRKQYKHGNQ*SEYYLEISNRQL 9
+ RC I + NY NY+ + Y + +YY I+ Q+
Sbjct: 72 ERERCKEPKIISSLSNNYKYSNYNNYNNNYNTNYKKLQYYNIINIEQI 119
>DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 9.1
Identities = 12/48 (25%), Positives = 20/48 (41%)
Frame = -2
Query: 152 QTHRCFYSIITQN*YLNYVLVNYSKFRKQYKHGNQ*SEYYLEISNRQL 9
+ RC I + NY NY+ + Y + +YY I+ Q+
Sbjct: 72 ERERCKEPKIISSLSNNYKYSNYNNYNNNYNTNYKKLQYYNIINIEQI 119
>DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 9.1
Identities = 12/48 (25%), Positives = 20/48 (41%)
Frame = -2
Query: 152 QTHRCFYSIITQN*YLNYVLVNYSKFRKQYKHGNQ*SEYYLEISNRQL 9
+ RC I + NY NY+ + Y + +YY I+ Q+
Sbjct: 72 ERERCKEPKIISSLSNNYKYSNYNNYNNNYNTNYKKLQYYNIINIEQI 119
>DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 9.1
Identities = 12/48 (25%), Positives = 20/48 (41%)
Frame = -2
Query: 152 QTHRCFYSIITQN*YLNYVLVNYSKFRKQYKHGNQ*SEYYLEISNRQL 9
+ RC I + NY NY+ + Y + +YY I+ Q+
Sbjct: 72 ERERCKEPKIISSLSNNYKYSNYNNYNNNYNTNYKKLQYYNIINIEQI 119
>DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 9.1
Identities = 12/48 (25%), Positives = 20/48 (41%)
Frame = -2
Query: 152 QTHRCFYSIITQN*YLNYVLVNYSKFRKQYKHGNQ*SEYYLEISNRQL 9
+ RC I + NY NY+ + Y + +YY I+ Q+
Sbjct: 72 ERERCKEPKIISSLSNNYKYSNYNNYNNNYNTNYKKLQYYNIINIEQI 119
>DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 9.1
Identities = 12/48 (25%), Positives = 20/48 (41%)
Frame = -2
Query: 152 QTHRCFYSIITQN*YLNYVLVNYSKFRKQYKHGNQ*SEYYLEISNRQL 9
+ RC I + NY NY+ + Y + +YY I+ Q+
Sbjct: 72 ERERCKEPKIISSLSNNYKYSNYNNYNNNYNTNYKKLQYYNIINIEQI 119
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 195,362
Number of Sequences: 438
Number of extensions: 4013
Number of successful extensions: 14
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23023035
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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