Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= psV30438.Seq
         (843 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY334011-1|AAR01136.1|  188|Anopheles gambiae beta-tubulin protein.    24   5.0  
AY334010-1|AAR01135.1|  188|Anopheles gambiae beta-tubulin protein.    24   5.0  
AY334009-1|AAR01134.1|  188|Anopheles gambiae beta-tubulin protein.    24   5.0  
AY334008-1|AAR01133.1|  188|Anopheles gambiae beta-tubulin protein.    24   5.0  
Z69977-1|CAA93817.1|  151|Anopheles gambiae ribosomal protein RS...    23   8.8  

>AY334011-1|AAR01136.1|  188|Anopheles gambiae beta-tubulin protein.
          Length = 188

 Score = 24.2 bits (50), Expect = 5.0
 Identities = 10/27 (37%), Positives = 14/27 (51%)
 Frame = +1

Query: 679 ITNPNMGDMPILVILRCXGIVKTFSFP 759
           + NP+ GD+  LV L   G+     FP
Sbjct: 113 VPNPSYGDLNHLVSLTMSGVTTCLRFP 139


>AY334010-1|AAR01135.1|  188|Anopheles gambiae beta-tubulin protein.
          Length = 188

 Score = 24.2 bits (50), Expect = 5.0
 Identities = 10/27 (37%), Positives = 14/27 (51%)
 Frame = +1

Query: 679 ITNPNMGDMPILVILRCXGIVKTFSFP 759
           + NP+ GD+  LV L   G+     FP
Sbjct: 113 VPNPSYGDLNHLVSLTMSGVTTCLRFP 139


>AY334009-1|AAR01134.1|  188|Anopheles gambiae beta-tubulin protein.
          Length = 188

 Score = 24.2 bits (50), Expect = 5.0
 Identities = 10/27 (37%), Positives = 14/27 (51%)
 Frame = +1

Query: 679 ITNPNMGDMPILVILRCXGIVKTFSFP 759
           + NP+ GD+  LV L   G+     FP
Sbjct: 113 VPNPSYGDLNHLVSLTMSGVTTCLRFP 139


>AY334008-1|AAR01133.1|  188|Anopheles gambiae beta-tubulin protein.
          Length = 188

 Score = 24.2 bits (50), Expect = 5.0
 Identities = 10/27 (37%), Positives = 14/27 (51%)
 Frame = +1

Query: 679 ITNPNMGDMPILVILRCXGIVKTFSFP 759
           + NP+ GD+  LV L   G+     FP
Sbjct: 113 VPNPSYGDLNHLVSLTMSGVTTCLRFP 139


>Z69977-1|CAA93817.1|  151|Anopheles gambiae ribosomal protein RS11
           protein.
          Length = 151

 Score = 23.4 bits (48), Expect = 8.8
 Identities = 10/34 (29%), Positives = 16/34 (47%)
 Frame = -2

Query: 188 GHLQITKEKNMNIVKYCEISLFPFRDYFLLFSKF 87
           GH+ I       +V+ C + L+  RDY     K+
Sbjct: 59  GHISIRGRILTGVVRKCIVLLYIRRDYLQFIRKY 92


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 824,809
Number of Sequences: 2352
Number of extensions: 15517
Number of successful extensions: 34
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 89305416
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)