Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= psV30436.Seq
(887 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M93689-1|AAA29368.1| 442|Anopheles gambiae protein ( Anopheles ... 26 1.8
U02964-1|AAA03444.1| 376|Anopheles gambiae actin 1D protein. 25 3.1
U02933-1|AAA56882.1| 376|Anopheles gambiae actin 1D protein. 25 3.1
U02930-1|AAA56881.1| 376|Anopheles gambiae actin 1D protein. 25 3.1
M93689-2|AAA29367.1| 975|Anopheles gambiae protein ( Anopheles ... 25 3.1
X95912-1|CAA65156.1| 696|Anopheles gambiae immune factor protein. 25 4.1
CR954256-1|CAJ14142.1| 376|Anopheles gambiae actin protein. 25 4.1
AY645021-1|AAT92557.1| 163|Anopheles gambiae even-skipped protein. 24 5.4
AY578812-1|AAT07317.1| 932|Anopheles gambiae wishful thinking p... 23 9.4
>M93689-1|AAA29368.1| 442|Anopheles gambiae protein ( Anopheles
gambiae T1 retroposon. ).
Length = 442
Score = 25.8 bits (54), Expect = 1.8
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = +1
Query: 454 ARFHPRCQTAHRRSKQNGSTEPPYS 528
ARF P T+HR S N S+ P S
Sbjct: 344 ARFDPSALTSHRSSSANCSSAAPKS 368
>U02964-1|AAA03444.1| 376|Anopheles gambiae actin 1D protein.
Length = 376
Score = 25.0 bits (52), Expect = 3.1
Identities = 15/73 (20%), Positives = 33/73 (45%), Gaps = 1/73 (1%)
Frame = +2
Query: 386 VAAGTGEFEAGISKNGQTREHALLAFTLGVKQ-LIVGVNKMDPLNHHTVSPDLRKSRRKY 562
V G G+ ++ + Q++ +L ++ ++ + M+ + HHT +LR + ++
Sbjct: 44 VMVGMGQKDSYVGDEAQSKR-GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEH 102
Query: 563 PHTSRRLGYNPAA 601
P NP A
Sbjct: 103 PVLLTEAPLNPKA 115
>U02933-1|AAA56882.1| 376|Anopheles gambiae actin 1D protein.
Length = 376
Score = 25.0 bits (52), Expect = 3.1
Identities = 15/73 (20%), Positives = 33/73 (45%), Gaps = 1/73 (1%)
Frame = +2
Query: 386 VAAGTGEFEAGISKNGQTREHALLAFTLGVKQ-LIVGVNKMDPLNHHTVSPDLRKSRRKY 562
V G G+ ++ + Q++ +L ++ ++ + M+ + HHT +LR + ++
Sbjct: 44 VMVGMGQKDSYVGDEAQSKR-GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEH 102
Query: 563 PHTSRRLGYNPAA 601
P NP A
Sbjct: 103 PVLLTEAPLNPKA 115
>U02930-1|AAA56881.1| 376|Anopheles gambiae actin 1D protein.
Length = 376
Score = 25.0 bits (52), Expect = 3.1
Identities = 15/73 (20%), Positives = 33/73 (45%), Gaps = 1/73 (1%)
Frame = +2
Query: 386 VAAGTGEFEAGISKNGQTREHALLAFTLGVKQ-LIVGVNKMDPLNHHTVSPDLRKSRRKY 562
V G G+ ++ + Q++ +L ++ ++ + M+ + HHT +LR + ++
Sbjct: 44 VMVGMGQKDSYVGDEAQSKR-GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEH 102
Query: 563 PHTSRRLGYNPAA 601
P NP A
Sbjct: 103 PVLLTEAPLNPKA 115
>M93689-2|AAA29367.1| 975|Anopheles gambiae protein ( Anopheles
gambiae T1 retroposon. ).
Length = 975
Score = 25.0 bits (52), Expect = 3.1
Identities = 10/32 (31%), Positives = 16/32 (50%)
Frame = +1
Query: 517 PPYSEPRFEEIKKEVSSYIKKIGLQPSCCRFR 612
PP+S +KK+ Y+++ L S FR
Sbjct: 333 PPWSNRTLRNLKKDRMKYLRRYRLNRSAFNFR 364
>X95912-1|CAA65156.1| 696|Anopheles gambiae immune factor protein.
Length = 696
Score = 24.6 bits (51), Expect = 4.1
Identities = 12/39 (30%), Positives = 20/39 (51%)
Frame = +3
Query: 696 RKGRAKLTENASLKLSMPSCQLAAPXTSPGLSLQDRIPN 812
R+ R KLT ++++ L + + L P L + IPN
Sbjct: 335 RRKRQKLTGSSNVFLPVVTAPLPGPSPPSSLGMPGNIPN 373
>CR954256-1|CAJ14142.1| 376|Anopheles gambiae actin protein.
Length = 376
Score = 24.6 bits (51), Expect = 4.1
Identities = 16/71 (22%), Positives = 31/71 (43%), Gaps = 1/71 (1%)
Frame = +2
Query: 386 VAAGTGEFEAGISKNGQTREHALLAFTLGVKQ-LIVGVNKMDPLNHHTVSPDLRKSRRKY 562
V G G +A + Q++ +L ++ +I + M+ + HHT +LR + ++
Sbjct: 44 VMVGMGNKDAYVGDEAQSKR-GILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEH 102
Query: 563 PHTSRRLGYNP 595
P NP
Sbjct: 103 PVLLTEAPLNP 113
>AY645021-1|AAT92557.1| 163|Anopheles gambiae even-skipped protein.
Length = 163
Score = 24.2 bits (50), Expect = 5.4
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = -1
Query: 719 RQLCPSFTLQPANPFEPKHF 660
+ +CP TL P P +PK F
Sbjct: 137 QSVCPQTTLLPVTPEKPKLF 156
>AY578812-1|AAT07317.1| 932|Anopheles gambiae wishful thinking
protein.
Length = 932
Score = 23.4 bits (48), Expect = 9.4
Identities = 12/50 (24%), Positives = 23/50 (46%)
Frame = +1
Query: 463 HPRCQTAHRRSKQNGSTEPPYSEPRFEEIKKEVSSYIKKIGLQPSCCRFR 612
HP + H R S+ PP+ + R + ++ + + + G + S R R
Sbjct: 834 HPPRGSRHTRQGSEASSPPPFLDDRSLKRQRSLEVFQEVFGPKGSIERLR 883
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 989,503
Number of Sequences: 2352
Number of extensions: 20578
Number of successful extensions: 47
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 42
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 47
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 95507181
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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