Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= psV30435.Seq
(886 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q24154 Cluster: 60S ribosomal protein L29; n=12; Endopt... 65 2e-09
UniRef50_A2I402 Cluster: Ribosomal protein L29e-like protein; n=... 64 3e-09
UniRef50_Q37953 Cluster: LacZ protein; n=1; Phage M13mp18|Rep: L... 63 8e-09
UniRef50_P00722 Cluster: Beta-galactosidase; n=35; root|Rep: Bet... 63 8e-09
UniRef50_Q8GEG0 Cluster: Putative uncharacterized protein; n=1; ... 61 3e-08
UniRef50_Q92366 Cluster: 60S ribosomal protein L29; n=40; Eukary... 60 6e-08
UniRef50_Q47336 Cluster: LacZ-alpha peptide; n=2; cellular organ... 60 7e-08
UniRef50_Q84WM0 Cluster: 60S ribosomal protein L29-2; n=4; Arabi... 59 1e-07
UniRef50_Q0IFR8 Cluster: Putative uncharacterized protein; n=1; ... 58 3e-07
UniRef50_UPI0000F2DCEB Cluster: PREDICTED: similar to ribosomal ... 57 7e-07
UniRef50_P47914 Cluster: 60S ribosomal protein L29; n=251; Eukar... 57 7e-07
UniRef50_UPI0000F2CE67 Cluster: PREDICTED: similar to ribosomal ... 56 2e-06
UniRef50_UPI0000498F17 Cluster: beta-galactosidase; n=3; Eukaryo... 52 1e-05
UniRef50_Q7QPW0 Cluster: GLP_433_2266_2454; n=2; Eukaryota|Rep: ... 51 5e-05
UniRef50_Q5KDL6 Cluster: Ribosomal protein L29.e, cytosolic, put... 50 1e-04
UniRef50_Q4PEG3 Cluster: Putative uncharacterized protein; n=2; ... 50 1e-04
UniRef50_Q669R9 Cluster: Beta-galactosidase; n=14; Yersinia|Rep:... 48 2e-04
UniRef50_Q4Q178 Cluster: Ribosomal protein L29, putative; n=7; T... 48 3e-04
UniRef50_Q9NAG9 Cluster: Putative uncharacterized protein; n=1; ... 47 6e-04
UniRef50_Q54TW3 Cluster: Ribosomal protein L29; n=1; Dictyosteli... 45 0.003
UniRef50_A5HW97 Cluster: Putative uncharacterized protein; n=2; ... 44 0.004
UniRef50_UPI0001552995 Cluster: PREDICTED: similar to ribosomal ... 43 0.009
UniRef50_UPI000049A0F8 Cluster: 60S ribosomal protein L29; n=1; ... 43 0.009
UniRef50_UPI00001CA5CB Cluster: PREDICTED: similar to 60S riboso... 43 0.012
UniRef50_A0CDP3 Cluster: Chromosome undetermined scaffold_17, wh... 42 0.021
UniRef50_P06219 Cluster: Beta-galactosidase; n=11; Gammaproteoba... 42 0.028
UniRef50_A6R574 Cluster: Predicted protein; n=1; Ajellomyces cap... 41 0.036
UniRef50_UPI0000DC0BB6 Cluster: UPI0000DC0BB6 related cluster; n... 40 0.064
UniRef50_A7MN76 Cluster: Putative uncharacterized protein; n=1; ... 40 0.11
UniRef50_Q4Y8Z0 Cluster: Putative uncharacterized protein; n=1; ... 38 0.26
UniRef50_Q4Z0C1 Cluster: Putative uncharacterized protein; n=3; ... 38 0.45
UniRef50_A7RHN0 Cluster: Predicted protein; n=1; Nematostella ve... 36 1.0
UniRef50_A0ZIW5 Cluster: Two-component sensor histidine kinase; ... 36 1.8
UniRef50_UPI0000D9C65B Cluster: PREDICTED: similar to 60S riboso... 35 3.2
UniRef50_A6SNG7 Cluster: Predicted protein; n=1; Botryotinia fuc... 34 4.2
UniRef50_UPI0000E1EFEB Cluster: PREDICTED: hypothetical protein;... 33 9.7
UniRef50_A2VBJ9 Cluster: Non-ribosomal peptide synthetase; n=1; ... 33 9.7
UniRef50_Q6Z5L1 Cluster: Myb-like transcription factor-like; n=2... 33 9.7
UniRef50_P81650 Cluster: Beta-galactosidase; n=26; Gammaproteoba... 33 9.7
>UniRef50_Q24154 Cluster: 60S ribosomal protein L29; n=12;
Endopterygota|Rep: 60S ribosomal protein L29 -
Drosophila melanogaster (Fruit fly)
Length = 76
Score = 65.3 bits (152), Expect = 2e-09
Identities = 34/73 (46%), Positives = 48/73 (65%), Gaps = 1/73 (1%)
Frame = +3
Query: 165 MAKSKNHTNHNQNRKAHRNGIKKPRKTRHEPPLAWIQNF*GIKGFARRVT*SQPSNSRGR 344
MAKSKNHTNHNQN+KAHRNGIK+P + RHE L F + +AR+ S+ + + R
Sbjct: 1 MAKSKNHTNHNQNKKAHRNGIKRPLRKRHESTLGMDVKFLINQRYARKGNLSREESVK-R 59
Query: 345 LREKL-PEKQRPR 380
E++ +K +P+
Sbjct: 60 YNERIASQKGKPK 72
>UniRef50_A2I402 Cluster: Ribosomal protein L29e-like protein; n=2;
Neoptera|Rep: Ribosomal protein L29e-like protein -
Maconellicoccus hirsutus (hibiscus mealybug)
Length = 90
Score = 64.5 bits (150), Expect = 3e-09
Identities = 28/39 (71%), Positives = 31/39 (79%)
Frame = +3
Query: 165 MAKSKNHTNHNQNRKAHRNGIKKPRKTRHEPPLAWIQNF 281
MAKSKNHTNHNQNRK HRNGIKKP++ R+E L Q F
Sbjct: 1 MAKSKNHTNHNQNRKDHRNGIKKPKRYRYESKLGVCQKF 39
Score = 34.7 bits (76), Expect = 3.2
Identities = 16/33 (48%), Positives = 22/33 (66%)
Frame = +2
Query: 236 KEDQARTTLGMDPKFLRNQRFCKKGNLKPAKQL 334
K + + LG+ KFL+NQRF KGNL A+Q+
Sbjct: 25 KRYRYESKLGVCQKFLKNQRFALKGNLSTAEQV 57
>UniRef50_Q37953 Cluster: LacZ protein; n=1; Phage M13mp18|Rep: LacZ
protein - Phage M13mp18
Length = 102
Score = 63.3 bits (147), Expect = 8e-09
Identities = 31/49 (63%), Positives = 32/49 (65%), Gaps = 3/49 (6%)
Frame = +3
Query: 510 RRDWENPGVTQLNRLAAHPPFASW---XIAKRPAPXALPNSCAPEWRMA 647
RRDWENPGVTQLNRLAAHPPFASW A+ P S EWR A
Sbjct: 32 RRDWENPGVTQLNRLAAHPPFASWRNSEEARTDRPSQQLRSLNGEWRFA 80
>UniRef50_P00722 Cluster: Beta-galactosidase; n=35; root|Rep:
Beta-galactosidase - Escherichia coli (strain K12)
Length = 1024
Score = 63.3 bits (147), Expect = 8e-09
Identities = 31/49 (63%), Positives = 32/49 (65%), Gaps = 3/49 (6%)
Frame = +3
Query: 510 RRDWENPGVTQLNRLAAHPPFASW---XIAKRPAPXALPNSCAPEWRMA 647
RRDWENPGVTQLNRLAAHPPFASW A+ P S EWR A
Sbjct: 14 RRDWENPGVTQLNRLAAHPPFASWRNSEEARTDRPSQQLRSLNGEWRFA 62
>UniRef50_Q8GEG0 Cluster: Putative uncharacterized protein; n=1;
Erwinia amylovora|Rep: Putative uncharacterized protein
- Erwinia amylovora (Fire blight bacteria)
Length = 123
Score = 61.3 bits (142), Expect = 3e-08
Identities = 30/49 (61%), Positives = 31/49 (63%), Gaps = 3/49 (6%)
Frame = +3
Query: 510 RRDWENPGVTQLNRLAAHPPFASW---XIAKRPAPXALPNSCAPEWRMA 647
RRDWENPGVTQLNRLAAHPPFASW A+ P EWR A
Sbjct: 74 RRDWENPGVTQLNRLAAHPPFASWRNSEEARTDRPSQQLRXLNGEWRFA 122
>UniRef50_Q92366 Cluster: 60S ribosomal protein L29; n=40;
Eukaryota|Rep: 60S ribosomal protein L29 -
Schizosaccharomyces pombe (Fission yeast)
Length = 61
Score = 60.5 bits (140), Expect = 6e-08
Identities = 24/30 (80%), Positives = 29/30 (96%)
Frame = +3
Query: 165 MAKSKNHTNHNQNRKAHRNGIKKPRKTRHE 254
MAKSKNHTNHNQN+KAHRNGIK+P+K R++
Sbjct: 1 MAKSKNHTNHNQNKKAHRNGIKRPQKHRYD 30
>UniRef50_Q47336 Cluster: LacZ-alpha peptide; n=2; cellular
organisms|Rep: LacZ-alpha peptide - Escherichia coli
Length = 90
Score = 60.1 bits (139), Expect = 7e-08
Identities = 24/24 (100%), Positives = 24/24 (100%)
Frame = +3
Query: 510 RRDWENPGVTQLNRLAAHPPFASW 581
RRDWENPGVTQLNRLAAHPPFASW
Sbjct: 28 RRDWENPGVTQLNRLAAHPPFASW 51
Score = 35.5 bits (78), Expect = 1.8
Identities = 16/22 (72%), Positives = 17/22 (77%)
Frame = +2
Query: 566 PFRQLXNSEEARTXRPSQQLRT 631
PF NSEEART RPSQQLR+
Sbjct: 47 PFASWRNSEEARTDRPSQQLRS 68
>UniRef50_Q84WM0 Cluster: 60S ribosomal protein L29-2; n=4;
Arabidopsis thaliana|Rep: 60S ribosomal protein L29-2 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 61
Score = 59.3 bits (137), Expect = 1e-07
Identities = 27/48 (56%), Positives = 33/48 (68%)
Frame = +3
Query: 165 MAKSKNHTNHNQNRKAHRNGIKKPRKTRHEPPLAWIQNF*GIKGFARR 308
MAKSKNHT HNQ+ KAH+NGIKKPR+ RH P F + +AR+
Sbjct: 1 MAKSKNHTAHNQSAKAHKNGIKKPRRHRHTPTRGMDPKFLRNQRYARK 48
Score = 37.5 bits (83), Expect = 0.45
Identities = 15/21 (71%), Positives = 18/21 (85%)
Frame = +2
Query: 257 TLGMDPKFLRNQRFCKKGNLK 319
T GMDPKFLRNQR+ +K N+K
Sbjct: 32 TRGMDPKFLRNQRYARKHNVK 52
>UniRef50_Q0IFR8 Cluster: Putative uncharacterized protein; n=1;
Aedes aegypti|Rep: Putative uncharacterized protein -
Aedes aegypti (Yellowfever mosquito)
Length = 97
Score = 58.0 bits (134), Expect = 3e-07
Identities = 23/30 (76%), Positives = 28/30 (93%)
Frame = +3
Query: 165 MAKSKNHTNHNQNRKAHRNGIKKPRKTRHE 254
MAKSKNHTNHNQN+KAH+NGI KP++ R+E
Sbjct: 1 MAKSKNHTNHNQNQKAHKNGITKPKRQRNE 30
>UniRef50_UPI0000F2DCEB Cluster: PREDICTED: similar to ribosomal
protein L29,; n=3; Monodelphis domestica|Rep: PREDICTED:
similar to ribosomal protein L29, - Monodelphis
domestica
Length = 407
Score = 56.8 bits (131), Expect = 7e-07
Identities = 24/30 (80%), Positives = 26/30 (86%)
Frame = +3
Query: 165 MAKSKNHTNHNQNRKAHRNGIKKPRKTRHE 254
MAKSKNHT HNQ+RK HRNGIKKPR R+E
Sbjct: 1 MAKSKNHTTHNQSRKWHRNGIKKPRSQRYE 30
Score = 33.5 bits (73), Expect = 7.3
Identities = 14/24 (58%), Positives = 17/24 (70%)
Frame = +2
Query: 263 GMDPKFLRNQRFCKKGNLKPAKQL 334
G+DPKFLRN RF KK K K++
Sbjct: 34 GVDPKFLRNMRFAKKHKKKGLKKM 57
>UniRef50_P47914 Cluster: 60S ribosomal protein L29; n=251;
Eukaryota|Rep: 60S ribosomal protein L29 - Homo sapiens
(Human)
Length = 159
Score = 56.8 bits (131), Expect = 7e-07
Identities = 24/30 (80%), Positives = 26/30 (86%)
Frame = +3
Query: 165 MAKSKNHTNHNQNRKAHRNGIKKPRKTRHE 254
MAKSKNHT HNQ+RK HRNGIKKPR R+E
Sbjct: 1 MAKSKNHTTHNQSRKWHRNGIKKPRSQRYE 30
Score = 35.9 bits (79), Expect = 1.4
Identities = 15/24 (62%), Positives = 18/24 (75%)
Frame = +2
Query: 263 GMDPKFLRNQRFCKKGNLKPAKQL 334
G+DPKFLRN RF KK N K K++
Sbjct: 34 GVDPKFLRNMRFAKKHNKKGLKKM 57
>UniRef50_UPI0000F2CE67 Cluster: PREDICTED: similar to ribosomal
protein L29/cell surface heparin binding protein HIP;
n=4; Monodelphis domestica|Rep: PREDICTED: similar to
ribosomal protein L29/cell surface heparin binding
protein HIP - Monodelphis domestica
Length = 252
Score = 55.6 bits (128), Expect = 2e-06
Identities = 23/30 (76%), Positives = 26/30 (86%)
Frame = +3
Query: 165 MAKSKNHTNHNQNRKAHRNGIKKPRKTRHE 254
MAKSKNHT HNQ+RK HRNGIKKPR ++E
Sbjct: 1 MAKSKNHTTHNQSRKWHRNGIKKPRSLKYE 30
>UniRef50_UPI0000498F17 Cluster: beta-galactosidase; n=3;
Eukaryota|Rep: beta-galactosidase - Entamoeba
histolytica HM-1:IMSS
Length = 86
Score = 52.4 bits (120), Expect = 1e-05
Identities = 24/25 (96%), Positives = 25/25 (100%)
Frame = +1
Query: 508 HVVTGKTLALPNLIALQHIPLSPAG 582
+VVTGKTLALPNLIALQHIPLSPAG
Sbjct: 11 NVVTGKTLALPNLIALQHIPLSPAG 35
Score = 39.9 bits (89), Expect = 0.084
Identities = 23/48 (47%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Frame = +2
Query: 491 HWPSFYTS*LGKPWRYPT*SPCSTSPFRQLXN-SEEARTXRPSQQLRT 631
HWPSFY GK P P SEEART RPSQQLR+
Sbjct: 5 HWPSFYNVVTGKTLALPNLIALQHIPLSPAGVISEEARTDRPSQQLRS 52
>UniRef50_Q7QPW0 Cluster: GLP_433_2266_2454; n=2; Eukaryota|Rep:
GLP_433_2266_2454 - Giardia lamblia ATCC 50803
Length = 62
Score = 50.8 bits (116), Expect = 5e-05
Identities = 21/29 (72%), Positives = 25/29 (86%)
Frame = +3
Query: 165 MAKSKNHTNHNQNRKAHRNGIKKPRKTRH 251
MAK KNHT+ NQNRK HRNGIKKP+K+ +
Sbjct: 1 MAKLKNHTSKNQNRKDHRNGIKKPKKSAY 29
>UniRef50_Q5KDL6 Cluster: Ribosomal protein L29.e, cytosolic,
putative; n=1; Filobasidiella neoformans|Rep: Ribosomal
protein L29.e, cytosolic, putative - Cryptococcus
neoformans (Filobasidiella neoformans)
Length = 99
Score = 49.6 bits (113), Expect = 1e-04
Identities = 24/52 (46%), Positives = 34/52 (65%), Gaps = 6/52 (11%)
Frame = +3
Query: 165 MAKSKNHTNHNQNRKAHRNGIKKPRKTRH------EPPLAWIQNF*GIKGFA 302
MAKSKNHT HNQ RKAHRN I++P+ ++ +P + + +N G G+A
Sbjct: 1 MAKSKNHTAHNQTRKAHRNKIQRPKTNKYHSLKGVDPKVGFFRNAKGYVGWA 52
>UniRef50_Q4PEG3 Cluster: Putative uncharacterized protein; n=2;
Eukaryota|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 282
Score = 49.6 bits (113), Expect = 1e-04
Identities = 24/34 (70%), Positives = 26/34 (76%)
Frame = +3
Query: 162 KMAKSKNHTNHNQNRKAHRNGIKKPRKTRHEPPL 263
+MAKSKN + HNQ RKAHRNGIKKP KT P L
Sbjct: 93 RMAKSKNSSQHNQVRKAHRNGIKKP-KTNKYPSL 125
>UniRef50_Q669R9 Cluster: Beta-galactosidase; n=14; Yersinia|Rep:
Beta-galactosidase - Yersinia pseudotuberculosis
Length = 1066
Score = 48.4 bits (110), Expect = 2e-04
Identities = 18/25 (72%), Positives = 21/25 (84%)
Frame = +3
Query: 507 TRRDWENPGVTQLNRLAAHPPFASW 581
+RRDWENP +TQ +RL AHPPF SW
Sbjct: 20 SRRDWENPQITQYHRLEAHPPFHSW 44
>UniRef50_Q4Q178 Cluster: Ribosomal protein L29, putative; n=7;
Trypanosomatidae|Rep: Ribosomal protein L29, putative -
Leishmania major
Length = 70
Score = 48.0 bits (109), Expect = 3e-04
Identities = 20/24 (83%), Positives = 21/24 (87%)
Frame = +3
Query: 165 MAKSKNHTNHNQNRKAHRNGIKKP 236
MAKSKNHTNHNQ+ K HRNGIK P
Sbjct: 1 MAKSKNHTNHNQSSKNHRNGIKGP 24
>UniRef50_Q9NAG9 Cluster: Putative uncharacterized protein; n=1;
Caenorhabditis elegans|Rep: Putative uncharacterized
protein - Caenorhabditis elegans
Length = 87
Score = 47.2 bits (107), Expect = 6e-04
Identities = 18/24 (75%), Positives = 21/24 (87%)
Frame = +3
Query: 171 KSKNHTNHNQNRKAHRNGIKKPRK 242
K +NHTNHN+N KAHRNGI KP+K
Sbjct: 14 KPENHTNHNRNNKAHRNGITKPKK 37
>UniRef50_Q54TW3 Cluster: Ribosomal protein L29; n=1; Dictyostelium
discoideum AX4|Rep: Ribosomal protein L29 -
Dictyostelium discoideum AX4
Length = 93
Score = 44.8 bits (101), Expect = 0.003
Identities = 18/23 (78%), Positives = 21/23 (91%)
Frame = +3
Query: 165 MAKSKNHTNHNQNRKAHRNGIKK 233
MAKSKNH+ H++NRK HRNGIKK
Sbjct: 1 MAKSKNHSTHHKNRKDHRNGIKK 23
>UniRef50_A5HW97 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis elegans|Rep: Putative uncharacterized
protein - Caenorhabditis elegans
Length = 167
Score = 44.4 bits (100), Expect = 0.004
Identities = 18/23 (78%), Positives = 19/23 (82%)
Frame = +3
Query: 171 KSKNHTNHNQNRKAHRNGIKKPR 239
KSKNHTNHNQN AHR GI KP+
Sbjct: 80 KSKNHTNHNQNNTAHRIGITKPK 102
>UniRef50_UPI0001552995 Cluster: PREDICTED: similar to ribosomal
protein; n=2; Mus musculus|Rep: PREDICTED: similar to
ribosomal protein - Mus musculus
Length = 244
Score = 43.2 bits (97), Expect = 0.009
Identities = 18/28 (64%), Positives = 22/28 (78%)
Frame = +3
Query: 168 AKSKNHTNHNQNRKAHRNGIKKPRKTRH 251
AKSKNH HNQ+ K +RNGIKKPR ++
Sbjct: 47 AKSKNHITHNQSCKWYRNGIKKPRSPKN 74
>UniRef50_UPI000049A0F8 Cluster: 60S ribosomal protein L29; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: 60S ribosomal
protein L29 - Entamoeba histolytica HM-1:IMSS
Length = 64
Score = 43.2 bits (97), Expect = 0.009
Identities = 16/29 (55%), Positives = 23/29 (79%)
Frame = +3
Query: 165 MAKSKNHTNHNQNRKAHRNGIKKPRKTRH 251
M+K KN ++HNQ+ KAHRNG KP+K+ +
Sbjct: 1 MSKDKNRSSHNQSHKAHRNGFYKPKKSAY 29
>UniRef50_UPI00001CA5CB Cluster: PREDICTED: similar to 60S ribosomal
protein L29 (P23); n=2; Rattus norvegicus|Rep:
PREDICTED: similar to 60S ribosomal protein L29 (P23) -
Rattus norvegicus
Length = 105
Score = 42.7 bits (96), Expect = 0.012
Identities = 18/27 (66%), Positives = 20/27 (74%)
Frame = +3
Query: 174 SKNHTNHNQNRKAHRNGIKKPRKTRHE 254
SKNHT HNQ K HRNGIKKP R++
Sbjct: 5 SKNHTTHNQFHKWHRNGIKKPWSQRYK 31
>UniRef50_A0CDP3 Cluster: Chromosome undetermined scaffold_17, whole
genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_17,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 73
Score = 41.9 bits (94), Expect = 0.021
Identities = 27/76 (35%), Positives = 41/76 (53%), Gaps = 1/76 (1%)
Frame = +3
Query: 165 MAKSKNHTNHNQNRKAHRNGIKKPRKTRHEPPLAWIQNF*GIKGFARRVT*SQPSNSRGR 344
MAKSKN T+H+ RK HRNGIKK R+ Q F + FA + + PS + +
Sbjct: 1 MAKSKNATSHHNARKHHRNGIKKLPNQRYRTLKGCNQRFAKNRRFAIK---NDPSIKKNK 57
Query: 345 -LREKLPEKQRPRNEH 389
+ +L +++ +N H
Sbjct: 58 SVETRLAKRKANKNIH 73
>UniRef50_P06219 Cluster: Beta-galactosidase; n=11;
Gammaproteobacteria|Rep: Beta-galactosidase - Klebsiella
pneumoniae
Length = 1034
Score = 41.5 bits (93), Expect = 0.028
Identities = 16/24 (66%), Positives = 17/24 (70%)
Frame = +3
Query: 510 RRDWENPGVTQLNRLAAHPPFASW 581
R DW N +T LNRL AHP FASW
Sbjct: 20 REDWHNQTITHLNRLPAHPVFASW 43
>UniRef50_A6R574 Cluster: Predicted protein; n=1; Ajellomyces
capsulatus NAm1|Rep: Predicted protein - Ajellomyces
capsulatus NAm1
Length = 176
Score = 41.1 bits (92), Expect = 0.036
Identities = 19/36 (52%), Positives = 21/36 (58%)
Frame = +3
Query: 156 LIKMAKSKNHTNHNQNRKAHRNGIKKPRKTRHEPPL 263
L+ H+ H NRKAHRNGIKKP KT P L
Sbjct: 109 LLPQTHQNGHSQHTLNRKAHRNGIKKP-KTHRYPSL 143
>UniRef50_UPI0000DC0BB6 Cluster: UPI0000DC0BB6 related cluster; n=1;
Rattus norvegicus|Rep: UPI0000DC0BB6 UniRef100 entry -
Rattus norvegicus
Length = 142
Score = 40.3 bits (90), Expect = 0.064
Identities = 18/25 (72%), Positives = 21/25 (84%)
Frame = +3
Query: 165 MAKSKNHTNHNQNRKAHRNGIKKPR 239
MAKSKNHT H Q++K HRN IKKP+
Sbjct: 17 MAKSKNHTTH-QSQKWHRNSIKKPK 40
>UniRef50_A7MN76 Cluster: Putative uncharacterized protein; n=1;
Enterobacter sakazakii ATCC BAA-894|Rep: Putative
uncharacterized protein - Enterobacter sakazakii ATCC
BAA-894
Length = 1043
Score = 39.5 bits (88), Expect = 0.11
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = +3
Query: 510 RRDWENPGVTQLNRLAAHPPFASWXIAKR 596
R DW+NP +T +NRL +H P W A R
Sbjct: 24 RNDWQNPAITSVNRLPSHTPLHGWRDADR 52
>UniRef50_Q4Y8Z0 Cluster: Putative uncharacterized protein; n=1;
Plasmodium chabaudi|Rep: Putative uncharacterized
protein - Plasmodium chabaudi
Length = 59
Score = 38.3 bits (85), Expect = 0.26
Identities = 14/24 (58%), Positives = 19/24 (79%)
Frame = +2
Query: 263 GMDPKFLRNQRFCKKGNLKPAKQL 334
G+DPKF RNQ++C KG +K K+L
Sbjct: 22 GLDPKFFRNQKYCLKGMIKKQKEL 45
>UniRef50_Q4Z0C1 Cluster: Putative uncharacterized protein; n=3;
Plasmodium (Vinckeia)|Rep: Putative uncharacterized
protein - Plasmodium berghei
Length = 275
Score = 37.5 bits (83), Expect = 0.45
Identities = 16/18 (88%), Positives = 17/18 (94%)
Frame = +2
Query: 434 KTRGGARYPIRPIVSRIT 487
+ RGGARYPIRPIVSRIT
Sbjct: 258 RPRGGARYPIRPIVSRIT 275
>UniRef50_A7RHN0 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 446
Score = 36.3 bits (80), Expect = 1.0
Identities = 15/51 (29%), Positives = 28/51 (54%)
Frame = -3
Query: 338 SRVAWLASGYPSCKTFDSLKILDPCQGWFVPGLPWLFDTISVSFAVLVMIC 186
S + W+ S K + + DP W +PGLP+++ IS+ ++++IC
Sbjct: 166 SSIVWVVSALLDKKWSTNPSLADPAGAW-IPGLPFIYSCISLLGGLMLLIC 215
>UniRef50_A0ZIW5 Cluster: Two-component sensor histidine kinase;
n=1; Nodularia spumigena CCY 9414|Rep: Two-component
sensor histidine kinase - Nodularia spumigena CCY 9414
Length = 265
Score = 35.5 bits (78), Expect = 1.8
Identities = 16/53 (30%), Positives = 27/53 (50%)
Frame = +1
Query: 139 LYRIENSSKWQSQRIIQIITKTAKLTEMVSKSQGRPGTNHPWHGSKIFKESKV 297
L RI+ S +WQ+QR +I++ + ++ QG G N +H S F +
Sbjct: 44 LARIDTSLEWQTQRFTLVISEQFSALLLGTQEQGEEGNNTGFHASLTFNSQAI 96
>UniRef50_UPI0000D9C65B Cluster: PREDICTED: similar to 60S ribosomal
protein L29 (Cell surface heparin-binding protein HIP);
n=1; Macaca mulatta|Rep: PREDICTED: similar to 60S
ribosomal protein L29 (Cell surface heparin-binding
protein HIP) - Macaca mulatta
Length = 237
Score = 34.7 bits (76), Expect = 3.2
Identities = 14/31 (45%), Positives = 22/31 (70%)
Frame = +3
Query: 159 IKMAKSKNHTNHNQNRKAHRNGIKKPRKTRH 251
++ S + T HNQ+RK +RNGIKK + +R+
Sbjct: 26 VQTCPSPHTTTHNQSRKWNRNGIKKSQSSRY 56
>UniRef50_A6SNG7 Cluster: Predicted protein; n=1; Botryotinia
fuckeliana B05.10|Rep: Predicted protein - Botryotinia
fuckeliana B05.10
Length = 329
Score = 34.3 bits (75), Expect = 4.2
Identities = 16/48 (33%), Positives = 25/48 (52%)
Frame = +3
Query: 132 YFPLQD*KLIKMAKSKNHTNHNQNRKAHRNGIKKPRKTRHEPPLAWIQ 275
YFP+Q + A SK +++ ++NR I PRKT ++W Q
Sbjct: 3 YFPIQAQDVHFQASSKRNSDSSENRTCPVEDINDPRKTPSPSAISWFQ 50
>UniRef50_UPI0000E1EFEB Cluster: PREDICTED: hypothetical protein;
n=1; Pan troglodytes|Rep: PREDICTED: hypothetical
protein - Pan troglodytes
Length = 202
Score = 33.1 bits (72), Expect = 9.7
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = +2
Query: 755 WPGXGSSVVPVLDQXVPYLKNVGSNVQKG 841
WPG G S++PV VP+ GS V++G
Sbjct: 38 WPGAGRSLLPVPSGPVPHFTQQGSQVEQG 66
>UniRef50_A2VBJ9 Cluster: Non-ribosomal peptide synthetase; n=1;
uncultured bacterium|Rep: Non-ribosomal peptide
synthetase - uncultured bacterium
Length = 338
Score = 33.1 bits (72), Expect = 9.7
Identities = 14/15 (93%), Positives = 14/15 (93%)
Frame = -3
Query: 482 YDSL*GELGTGPPLE 438
YDSL GELGTGPPLE
Sbjct: 278 YDSLYGELGTGPPLE 292
>UniRef50_Q6Z5L1 Cluster: Myb-like transcription factor-like; n=2;
Oryza sativa|Rep: Myb-like transcription factor-like -
Oryza sativa subsp. japonica (Rice)
Length = 281
Score = 33.1 bits (72), Expect = 9.7
Identities = 16/48 (33%), Positives = 19/48 (39%)
Frame = +3
Query: 498 RRFTRRDWENPGVTQLNRLAAHPPFASWXIAKRPAPXALPNSCAPEWR 641
RR R+W +L RLA F W R P +SC WR
Sbjct: 99 RRLPEREWTAEEDERLRRLAKENLFRQWWKVAREMPGRSGDSCRARWR 146
>UniRef50_P81650 Cluster: Beta-galactosidase; n=26;
Gammaproteobacteria|Rep: Beta-galactosidase -
Pseudoalteromonas haloplanktis (Alteromonas
haloplanktis)
Length = 1039
Score = 33.1 bits (72), Expect = 9.7
Identities = 12/20 (60%), Positives = 15/20 (75%)
Frame = +3
Query: 510 RRDWENPGVTQLNRLAAHPP 569
RRDWENP Q+N++ AH P
Sbjct: 10 RRDWENPITVQVNQVKAHSP 29
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 807,650,284
Number of Sequences: 1657284
Number of extensions: 15219311
Number of successful extensions: 35931
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 34344
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 35889
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 79522270534
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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