Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= psV30434.Seq
         (686 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less prot...    22   4.1  
AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    21   9.5  
AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory recept...    21   9.5  
AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory recept...    21   9.5  
AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory recept...    21   9.5  

>AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less
           protein.
          Length = 312

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 8/24 (33%), Positives = 12/24 (50%)
 Frame = -1

Query: 545 KCFSMKYRGVGSAGNSAASPRTLF 474
           KC S++    G  G     PRT++
Sbjct: 105 KCLSLERPSGGGKGKKMRKPRTIY 128


>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = -2

Query: 232 SSVYILSLEFLFHLIYMV 179
           S VY+L L  L  L+YMV
Sbjct: 267 SVVYVLILYILESLLYMV 284


>AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory receptor
           candidate 30 protein.
          Length = 394

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 7/16 (43%), Positives = 13/16 (81%)
 Frame = +2

Query: 344 VLSLLVHIIRLEHTYI 391
           V++L++  I L+HT+I
Sbjct: 211 VMALVLQFITLQHTFI 226


>AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory receptor
           candidate 29 protein.
          Length = 429

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 7/16 (43%), Positives = 13/16 (81%)
 Frame = +2

Query: 344 VLSLLVHIIRLEHTYI 391
           V++L++  I L+HT+I
Sbjct: 211 VMALVLQFITLQHTFI 226


>AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory receptor
           candidate 7 protein.
          Length = 429

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 7/16 (43%), Positives = 13/16 (81%)
 Frame = +2

Query: 344 VLSLLVHIIRLEHTYI 391
           V++L++  I L+HT+I
Sbjct: 211 VMALVLQFITLQHTFI 226


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 124,491
Number of Sequences: 336
Number of extensions: 2136
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18010165
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)