Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= psV30434.Seq
         (686 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL512593-1|CAI14941.1| 1411|Homo sapiens zinc finger protein 462...    30   6.7  
AK027866-1|BAB55417.1| 1181|Homo sapiens protein ( Homo sapiens ...    30   6.7  
AB058706-1|BAB47432.2| 1412|Homo sapiens KIAA1803 protein protein.     30   6.7  

>AL512593-1|CAI14941.1| 1411|Homo sapiens zinc finger protein 462
           protein.
          Length = 1411

 Score = 30.3 bits (65), Expect = 6.7
 Identities = 17/43 (39%), Positives = 21/43 (48%), Gaps = 2/43 (4%)
 Frame = +3

Query: 321 LRTAHCAQCSHYSYILYV*NIHIFSKH--IYMIITSCRRYAFL 443
           LR   C QCS+ S   Y    HI   H  +   +TS  R+AFL
Sbjct: 107 LRALKCRQCSYTSPYFYALRKHIKKDHPALKATVTSIMRWAFL 149


>AK027866-1|BAB55417.1| 1181|Homo sapiens protein ( Homo sapiens
           cDNA FLJ14960 fis, clone PLACE4000192, weakly similar to
           ZINC FINGER PROTEIN 142. ).
          Length = 1181

 Score = 30.3 bits (65), Expect = 6.7
 Identities = 17/43 (39%), Positives = 21/43 (48%), Gaps = 2/43 (4%)
 Frame = +3

Query: 321 LRTAHCAQCSHYSYILYV*NIHIFSKH--IYMIITSCRRYAFL 443
           LR   C QCS+ S   Y    HI   H  +   +TS  R+AFL
Sbjct: 107 LRALKCRQCSYTSPYFYALRKHIKKDHPALKATVTSIMRWAFL 149


>AB058706-1|BAB47432.2| 1412|Homo sapiens KIAA1803 protein protein.
          Length = 1412

 Score = 30.3 bits (65), Expect = 6.7
 Identities = 17/43 (39%), Positives = 21/43 (48%), Gaps = 2/43 (4%)
 Frame = +3

Query: 321 LRTAHCAQCSHYSYILYV*NIHIFSKH--IYMIITSCRRYAFL 443
           LR   C QCS+ S   Y    HI   H  +   +TS  R+AFL
Sbjct: 107 LRALKCRQCSYTSPYFYALRKHIKKDHPALKATVTSIMRWAFL 149


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 72,785,510
Number of Sequences: 237096
Number of extensions: 1130926
Number of successful extensions: 1204
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1182
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1204
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7839245960
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)