Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= psV30433.Seq
(904 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X03342-1|CAA27048.1| 135|Homo sapiens protein ( Human mRNA for ... 140 5e-33
BC070209-1|AAH70209.1| 135|Homo sapiens ribosomal protein L32 p... 140 5e-33
BC011514-1|AAH11514.1| 135|Homo sapiens ribosomal protein L32 p... 140 5e-33
AB061831-1|BAB79469.1| 135|Homo sapiens ribosomal protein L32 p... 140 5e-33
BC015974-1|AAH15974.1| 107|Homo sapiens RPS29 protein protein. 79 2e-14
BC053996-1|AAH53996.1| 33|Homo sapiens RPL32P3 protein protein. 51 5e-06
BC015389-1|AAH15389.1| 82|Homo sapiens RPL32P3 protein protein. 49 2e-05
U35113-1|AAA78935.1| 715|Homo sapiens mta1 protein. 31 5.7
BC142941-1|AAI42942.1| 715|Homo sapiens metastasis associated 1... 31 5.7
BC009443-1|AAH09443.2| 263|Homo sapiens MTA1 protein protein. 31 5.7
AB196633-1|BAE53435.1| 1857|Homo sapiens C8orfK23 protein protein. 31 7.6
>X03342-1|CAA27048.1| 135|Homo sapiens protein ( Human mRNA for
ribosomal protein L32. ).
Length = 135
Score = 140 bits (340), Expect = 5e-33
Identities = 61/72 (84%), Positives = 68/72 (94%)
Frame = +2
Query: 38 AIRPVYRPTIVKKRTKRFIRHQSDRYDKLKRNWRKPRGIDNRVRRRFKGQYLMPNIGYGS 217
A+RP+ +P IVKKRTK+FIRHQSDRY K+KRNWRKPRGIDNRVRRRFKGQ LMPNIGYGS
Sbjct: 3 ALRPLVKPKIVKKRTKKFIRHQSDRYVKIKRNWRKPRGIDNRVRRRFKGQILMPNIGYGS 62
Query: 218 NKKTRHMLPNGF 253
NKKT+HMLP+GF
Sbjct: 63 NKKTKHMLPSGF 74
Score = 96.7 bits (230), Expect = 1e-19
Identities = 47/65 (72%), Positives = 52/65 (80%)
Frame = +1
Query: 241 PKWIPKVLVHNVKELEILMMQNRKYCAEIAHGVSSKKRKLIVERAQQLSIRVTNAAARLR 420
P K LVHNVKELE+L+M N+ YCAEIAH VSSK RK IVERA QL+IRVTN ARLR
Sbjct: 71 PSGFRKFLVHNVKELEVLLMCNKSYCAEIAHNVSSKNRKAIVERAAQLAIRVTNPNARLR 130
Query: 421 SQENE 435
S+ENE
Sbjct: 131 SEENE 135
>BC070209-1|AAH70209.1| 135|Homo sapiens ribosomal protein L32
protein.
Length = 135
Score = 140 bits (340), Expect = 5e-33
Identities = 61/72 (84%), Positives = 68/72 (94%)
Frame = +2
Query: 38 AIRPVYRPTIVKKRTKRFIRHQSDRYDKLKRNWRKPRGIDNRVRRRFKGQYLMPNIGYGS 217
A+RP+ +P IVKKRTK+FIRHQSDRY K+KRNWRKPRGIDNRVRRRFKGQ LMPNIGYGS
Sbjct: 3 ALRPLVKPKIVKKRTKKFIRHQSDRYVKIKRNWRKPRGIDNRVRRRFKGQILMPNIGYGS 62
Query: 218 NKKTRHMLPNGF 253
NKKT+HMLP+GF
Sbjct: 63 NKKTKHMLPSGF 74
Score = 96.7 bits (230), Expect = 1e-19
Identities = 47/65 (72%), Positives = 52/65 (80%)
Frame = +1
Query: 241 PKWIPKVLVHNVKELEILMMQNRKYCAEIAHGVSSKKRKLIVERAQQLSIRVTNAAARLR 420
P K LVHNVKELE+L+M N+ YCAEIAH VSSK RK IVERA QL+IRVTN ARLR
Sbjct: 71 PSGFRKFLVHNVKELEVLLMCNKSYCAEIAHNVSSKNRKAIVERAAQLAIRVTNPNARLR 130
Query: 421 SQENE 435
S+ENE
Sbjct: 131 SEENE 135
>BC011514-1|AAH11514.1| 135|Homo sapiens ribosomal protein L32
protein.
Length = 135
Score = 140 bits (340), Expect = 5e-33
Identities = 61/72 (84%), Positives = 68/72 (94%)
Frame = +2
Query: 38 AIRPVYRPTIVKKRTKRFIRHQSDRYDKLKRNWRKPRGIDNRVRRRFKGQYLMPNIGYGS 217
A+RP+ +P IVKKRTK+FIRHQSDRY K+KRNWRKPRGIDNRVRRRFKGQ LMPNIGYGS
Sbjct: 3 ALRPLVKPKIVKKRTKKFIRHQSDRYVKIKRNWRKPRGIDNRVRRRFKGQILMPNIGYGS 62
Query: 218 NKKTRHMLPNGF 253
NKKT+HMLP+GF
Sbjct: 63 NKKTKHMLPSGF 74
Score = 96.7 bits (230), Expect = 1e-19
Identities = 47/65 (72%), Positives = 52/65 (80%)
Frame = +1
Query: 241 PKWIPKVLVHNVKELEILMMQNRKYCAEIAHGVSSKKRKLIVERAQQLSIRVTNAAARLR 420
P K LVHNVKELE+L+M N+ YCAEIAH VSSK RK IVERA QL+IRVTN ARLR
Sbjct: 71 PSGFRKFLVHNVKELEVLLMCNKSYCAEIAHNVSSKNRKAIVERAAQLAIRVTNPNARLR 130
Query: 421 SQENE 435
S+ENE
Sbjct: 131 SEENE 135
>AB061831-1|BAB79469.1| 135|Homo sapiens ribosomal protein L32
protein.
Length = 135
Score = 140 bits (340), Expect = 5e-33
Identities = 61/72 (84%), Positives = 68/72 (94%)
Frame = +2
Query: 38 AIRPVYRPTIVKKRTKRFIRHQSDRYDKLKRNWRKPRGIDNRVRRRFKGQYLMPNIGYGS 217
A+RP+ +P IVKKRTK+FIRHQSDRY K+KRNWRKPRGIDNRVRRRFKGQ LMPNIGYGS
Sbjct: 3 ALRPLVKPKIVKKRTKKFIRHQSDRYVKIKRNWRKPRGIDNRVRRRFKGQILMPNIGYGS 62
Query: 218 NKKTRHMLPNGF 253
NKKT+HMLP+GF
Sbjct: 63 NKKTKHMLPSGF 74
Score = 96.7 bits (230), Expect = 1e-19
Identities = 47/65 (72%), Positives = 52/65 (80%)
Frame = +1
Query: 241 PKWIPKVLVHNVKELEILMMQNRKYCAEIAHGVSSKKRKLIVERAQQLSIRVTNAAARLR 420
P K LVHNVKELE+L+M N+ YCAEIAH VSSK RK IVERA QL+IRVTN ARLR
Sbjct: 71 PSGFRKFLVHNVKELEVLLMCNKSYCAEIAHNVSSKNRKAIVERAAQLAIRVTNPNARLR 130
Query: 421 SQENE 435
S+ENE
Sbjct: 131 SEENE 135
>BC015974-1|AAH15974.1| 107|Homo sapiens RPS29 protein protein.
Length = 107
Score = 79.4 bits (187), Expect = 2e-14
Identities = 39/65 (60%), Positives = 46/65 (70%)
Frame = +1
Query: 241 PKWIPKVLVHNVKELEILMMQNRKYCAEIAHGVSSKKRKLIVERAQQLSIRVTNAAARLR 420
P K LVHNVKELE+L++ N+ YC EI H VSSK K I+ERA Q+ IRVTNA A L
Sbjct: 43 PSGFWKFLVHNVKELEVLLVSNKSYCVEITHDVSSKNCKAILERAAQVVIRVTNANASLH 102
Query: 421 SQENE 435
S E+E
Sbjct: 103 SAESE 107
Score = 42.7 bits (96), Expect = 0.002
Identities = 16/20 (80%), Positives = 19/20 (95%)
Frame = +2
Query: 194 MPNIGYGSNKKTRHMLPNGF 253
MPNIGYG NKKT+H+LP+GF
Sbjct: 27 MPNIGYGRNKKTKHILPSGF 46
>BC053996-1|AAH53996.1| 33|Homo sapiens RPL32P3 protein protein.
Length = 33
Score = 51.2 bits (117), Expect = 5e-06
Identities = 22/31 (70%), Positives = 27/31 (87%)
Frame = +2
Query: 38 AIRPVYRPTIVKKRTKRFIRHQSDRYDKLKR 130
A+R + +P IVKKRTK+FIRHQSDRY K+KR
Sbjct: 3 ALRSLVKPKIVKKRTKKFIRHQSDRYVKIKR 33
>BC015389-1|AAH15389.1| 82|Homo sapiens RPL32P3 protein protein.
Length = 82
Score = 49.2 bits (112), Expect = 2e-05
Identities = 21/30 (70%), Positives = 26/30 (86%)
Frame = +2
Query: 38 AIRPVYRPTIVKKRTKRFIRHQSDRYDKLK 127
A+R + +P IVKKRTK+FIRHQSDRY K+K
Sbjct: 3 ALRSLVKPKIVKKRTKKFIRHQSDRYVKIK 32
>U35113-1|AAA78935.1| 715|Homo sapiens mta1 protein.
Length = 715
Score = 31.1 bits (67), Expect = 5.7
Identities = 14/41 (34%), Positives = 26/41 (63%)
Frame = +2
Query: 125 KRNWRKPRGIDNRVRRRFKGQYLMPNIGYGSNKKTRHMLPN 247
KR++ + G+D +++R LMP+ G ++ +TRHM P+
Sbjct: 582 KRSYEQHNGVDGNMKKRL----LMPSRGLANHGQTRHMGPS 618
>BC142941-1|AAI42942.1| 715|Homo sapiens metastasis associated 1
protein.
Length = 715
Score = 31.1 bits (67), Expect = 5.7
Identities = 14/41 (34%), Positives = 26/41 (63%)
Frame = +2
Query: 125 KRNWRKPRGIDNRVRRRFKGQYLMPNIGYGSNKKTRHMLPN 247
KR++ + G+D +++R LMP+ G ++ +TRHM P+
Sbjct: 582 KRSYEQHNGVDGNMKKRL----LMPSRGLANHGQTRHMGPS 618
>BC009443-1|AAH09443.2| 263|Homo sapiens MTA1 protein protein.
Length = 263
Score = 31.1 bits (67), Expect = 5.7
Identities = 14/41 (34%), Positives = 26/41 (63%)
Frame = +2
Query: 125 KRNWRKPRGIDNRVRRRFKGQYLMPNIGYGSNKKTRHMLPN 247
KR++ + G+D +++R LMP+ G ++ +TRHM P+
Sbjct: 130 KRSYEQHNGVDGNMKKRL----LMPSRGLANHGQTRHMGPS 166
>AB196633-1|BAE53435.1| 1857|Homo sapiens C8orfK23 protein protein.
Length = 1857
Score = 30.7 bits (66), Expect = 7.6
Identities = 17/49 (34%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Frame = +2
Query: 512 RITIHWP-SFYNVVTGKTLALPNLIALQHIPLSPAGVIAKRPAPIALPN 655
R+ WP S +TGK A +L+ + +P G K P P+A PN
Sbjct: 1749 RVRGWWPFSKSKELTGKVEAEFHLVTAEEAEKNPVGKARKEPEPLAKPN 1797
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 129,693,061
Number of Sequences: 237096
Number of extensions: 2814646
Number of successful extensions: 10183
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 9903
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10183
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11659288620
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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