Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= psV30433.Seq
(904 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT011442-1|AAR99100.1| 147|Drosophila melanogaster RE59709p pro... 144 1e-34
AE014297-4525|AAN14210.1| 147|Drosophila melanogaster CG7939-PC... 144 1e-34
Y13939-1|CAA74278.1| 134|Drosophila melanogaster ribosomal prot... 141 1e-33
U92431-1|AAB51389.1| 134|Drosophila melanogaster ribosomal prot... 141 1e-33
AY070656-1|AAL48127.1| 134|Drosophila melanogaster RH03940p pro... 141 1e-33
AE014297-4527|AAN14211.1| 134|Drosophila melanogaster CG7939-PB... 141 1e-33
AE014297-4526|AAF57001.1| 134|Drosophila melanogaster CG7939-PA... 141 1e-33
X00848-1|CAA25404.1| 133|Drosophila melanogaster ribosomal prot... 138 1e-32
BT030157-1|ABN49296.1| 126|Drosophila melanogaster IP17707p pro... 36 0.10
AY061327-1|AAL28875.1| 719|Drosophila melanogaster LD24749p pro... 32 1.2
AJ243916-1|CAB51032.1| 719|Drosophila melanogaster DOMINA prote... 32 1.2
AJ243814-1|CAB51073.1| 719|Drosophila melanogaster DOMINA prote... 32 1.2
AF264033-1|AAF91395.1| 719|Drosophila melanogaster winged-helix... 32 1.2
AE014297-1143|AAF54525.1| 719|Drosophila melanogaster CG4029-PA... 32 1.2
AB028890-1|BAA94598.1| 719|Drosophila melanogaster Winged-helix... 32 1.2
AE014296-2194|AAN11859.1| 1257|Drosophila melanogaster CG11006-P... 29 6.6
AE014296-2193|AAN11858.1| 1294|Drosophila melanogaster CG11006-P... 29 6.6
AE014296-2192|AAN11860.2| 1272|Drosophila melanogaster CG11006-P... 29 6.6
>BT011442-1|AAR99100.1| 147|Drosophila melanogaster RE59709p
protein.
Length = 147
Score = 144 bits (350), Expect = 1e-34
Identities = 63/75 (84%), Positives = 66/75 (88%)
Frame = +2
Query: 29 YKMAIRPVYRPTIVKKRTKRFIRHQSDRYDKLKRNWRKPRGIDNRVRRRFKGQYLMPNIG 208
+KM IRP YRP IVKKRTK FIRHQSDRY KL WRKP+GIDNRVRRRFKGQYLMPNIG
Sbjct: 12 FKMTIRPAYRPKIVKKRTKHFIRHQSDRYAKLSHKWRKPKGIDNRVRRRFKGQYLMPNIG 71
Query: 209 YGSNKKTRHMLPNGF 253
YGSNK+TRHMLP GF
Sbjct: 72 YGSNKRTRHMLPTGF 86
Score = 101 bits (241), Expect = 2e-21
Identities = 48/65 (73%), Positives = 54/65 (83%)
Frame = +1
Query: 241 PKWIPKVLVHNVKELEILMMQNRKYCAEIAHGVSSKKRKLIVERAQQLSIRVTNAAARLR 420
P K LVHNV+ELE+L+MQNR YC EIAHGVSSKKRK IVERA+QLS+R+TN RLR
Sbjct: 83 PTGFKKFLVHNVRELEVLLMQNRVYCGEIAHGVSSKKRKEIVERAKQLSVRLTNPNGRLR 142
Query: 421 SQENE 435
SQENE
Sbjct: 143 SQENE 147
>AE014297-4525|AAN14210.1| 147|Drosophila melanogaster CG7939-PC,
isoform C protein.
Length = 147
Score = 144 bits (350), Expect = 1e-34
Identities = 63/75 (84%), Positives = 66/75 (88%)
Frame = +2
Query: 29 YKMAIRPVYRPTIVKKRTKRFIRHQSDRYDKLKRNWRKPRGIDNRVRRRFKGQYLMPNIG 208
+KM IRP YRP IVKKRTK FIRHQSDRY KL WRKP+GIDNRVRRRFKGQYLMPNIG
Sbjct: 12 FKMTIRPAYRPKIVKKRTKHFIRHQSDRYAKLSHKWRKPKGIDNRVRRRFKGQYLMPNIG 71
Query: 209 YGSNKKTRHMLPNGF 253
YGSNK+TRHMLP GF
Sbjct: 72 YGSNKRTRHMLPTGF 86
Score = 101 bits (241), Expect = 2e-21
Identities = 48/65 (73%), Positives = 54/65 (83%)
Frame = +1
Query: 241 PKWIPKVLVHNVKELEILMMQNRKYCAEIAHGVSSKKRKLIVERAQQLSIRVTNAAARLR 420
P K LVHNV+ELE+L+MQNR YC EIAHGVSSKKRK IVERA+QLS+R+TN RLR
Sbjct: 83 PTGFKKFLVHNVRELEVLLMQNRVYCGEIAHGVSSKKRKEIVERAKQLSVRLTNPNGRLR 142
Query: 421 SQENE 435
SQENE
Sbjct: 143 SQENE 147
>Y13939-1|CAA74278.1| 134|Drosophila melanogaster ribosomal protein
49 protein.
Length = 134
Score = 141 bits (342), Expect = 1e-33
Identities = 62/73 (84%), Positives = 64/73 (87%)
Frame = +2
Query: 35 MAIRPVYRPTIVKKRTKRFIRHQSDRYDKLKRNWRKPRGIDNRVRRRFKGQYLMPNIGYG 214
M IRP YRP IVKKRTK FIRHQSDRY KL WRKP+GIDNRVRRRFKGQYLMPNIGYG
Sbjct: 1 MTIRPAYRPKIVKKRTKHFIRHQSDRYAKLSHKWRKPKGIDNRVRRRFKGQYLMPNIGYG 60
Query: 215 SNKKTRHMLPNGF 253
SNK+TRHMLP GF
Sbjct: 61 SNKRTRHMLPTGF 73
Score = 101 bits (241), Expect = 2e-21
Identities = 48/65 (73%), Positives = 54/65 (83%)
Frame = +1
Query: 241 PKWIPKVLVHNVKELEILMMQNRKYCAEIAHGVSSKKRKLIVERAQQLSIRVTNAAARLR 420
P K LVHNV+ELE+L+MQNR YC EIAHGVSSKKRK IVERA+QLS+R+TN RLR
Sbjct: 70 PTGFKKFLVHNVRELEVLLMQNRVYCGEIAHGVSSKKRKEIVERAKQLSVRLTNPNGRLR 129
Query: 421 SQENE 435
SQENE
Sbjct: 130 SQENE 134
>U92431-1|AAB51389.1| 134|Drosophila melanogaster ribosomal protein
49 protein.
Length = 134
Score = 141 bits (342), Expect = 1e-33
Identities = 62/73 (84%), Positives = 64/73 (87%)
Frame = +2
Query: 35 MAIRPVYRPTIVKKRTKRFIRHQSDRYDKLKRNWRKPRGIDNRVRRRFKGQYLMPNIGYG 214
M IRP YRP IVKKRTK FIRHQSDRY KL WRKP+GIDNRVRRRFKGQYLMPNIGYG
Sbjct: 1 MTIRPAYRPKIVKKRTKHFIRHQSDRYAKLSHKWRKPKGIDNRVRRRFKGQYLMPNIGYG 60
Query: 215 SNKKTRHMLPNGF 253
SNK+TRHMLP GF
Sbjct: 61 SNKRTRHMLPTGF 73
Score = 101 bits (241), Expect = 2e-21
Identities = 48/65 (73%), Positives = 54/65 (83%)
Frame = +1
Query: 241 PKWIPKVLVHNVKELEILMMQNRKYCAEIAHGVSSKKRKLIVERAQQLSIRVTNAAARLR 420
P K LVHNV+ELE+L+MQNR YC EIAHGVSSKKRK IVERA+QLS+R+TN RLR
Sbjct: 70 PTGFKKFLVHNVRELEVLLMQNRVYCGEIAHGVSSKKRKEIVERAKQLSVRLTNPNGRLR 129
Query: 421 SQENE 435
SQENE
Sbjct: 130 SQENE 134
>AY070656-1|AAL48127.1| 134|Drosophila melanogaster RH03940p
protein.
Length = 134
Score = 141 bits (342), Expect = 1e-33
Identities = 62/73 (84%), Positives = 64/73 (87%)
Frame = +2
Query: 35 MAIRPVYRPTIVKKRTKRFIRHQSDRYDKLKRNWRKPRGIDNRVRRRFKGQYLMPNIGYG 214
M IRP YRP IVKKRTK FIRHQSDRY KL WRKP+GIDNRVRRRFKGQYLMPNIGYG
Sbjct: 1 MTIRPAYRPKIVKKRTKHFIRHQSDRYAKLSHKWRKPKGIDNRVRRRFKGQYLMPNIGYG 60
Query: 215 SNKKTRHMLPNGF 253
SNK+TRHMLP GF
Sbjct: 61 SNKRTRHMLPTGF 73
Score = 101 bits (241), Expect = 2e-21
Identities = 48/65 (73%), Positives = 54/65 (83%)
Frame = +1
Query: 241 PKWIPKVLVHNVKELEILMMQNRKYCAEIAHGVSSKKRKLIVERAQQLSIRVTNAAARLR 420
P K LVHNV+ELE+L+MQNR YC EIAHGVSSKKRK IVERA+QLS+R+TN RLR
Sbjct: 70 PTGFKKFLVHNVRELEVLLMQNRVYCGEIAHGVSSKKRKEIVERAKQLSVRLTNPNGRLR 129
Query: 421 SQENE 435
SQENE
Sbjct: 130 SQENE 134
>AE014297-4527|AAN14211.1| 134|Drosophila melanogaster CG7939-PB,
isoform B protein.
Length = 134
Score = 141 bits (342), Expect = 1e-33
Identities = 62/73 (84%), Positives = 64/73 (87%)
Frame = +2
Query: 35 MAIRPVYRPTIVKKRTKRFIRHQSDRYDKLKRNWRKPRGIDNRVRRRFKGQYLMPNIGYG 214
M IRP YRP IVKKRTK FIRHQSDRY KL WRKP+GIDNRVRRRFKGQYLMPNIGYG
Sbjct: 1 MTIRPAYRPKIVKKRTKHFIRHQSDRYAKLSHKWRKPKGIDNRVRRRFKGQYLMPNIGYG 60
Query: 215 SNKKTRHMLPNGF 253
SNK+TRHMLP GF
Sbjct: 61 SNKRTRHMLPTGF 73
Score = 101 bits (241), Expect = 2e-21
Identities = 48/65 (73%), Positives = 54/65 (83%)
Frame = +1
Query: 241 PKWIPKVLVHNVKELEILMMQNRKYCAEIAHGVSSKKRKLIVERAQQLSIRVTNAAARLR 420
P K LVHNV+ELE+L+MQNR YC EIAHGVSSKKRK IVERA+QLS+R+TN RLR
Sbjct: 70 PTGFKKFLVHNVRELEVLLMQNRVYCGEIAHGVSSKKRKEIVERAKQLSVRLTNPNGRLR 129
Query: 421 SQENE 435
SQENE
Sbjct: 130 SQENE 134
>AE014297-4526|AAF57001.1| 134|Drosophila melanogaster CG7939-PA,
isoform A protein.
Length = 134
Score = 141 bits (342), Expect = 1e-33
Identities = 62/73 (84%), Positives = 64/73 (87%)
Frame = +2
Query: 35 MAIRPVYRPTIVKKRTKRFIRHQSDRYDKLKRNWRKPRGIDNRVRRRFKGQYLMPNIGYG 214
M IRP YRP IVKKRTK FIRHQSDRY KL WRKP+GIDNRVRRRFKGQYLMPNIGYG
Sbjct: 1 MTIRPAYRPKIVKKRTKHFIRHQSDRYAKLSHKWRKPKGIDNRVRRRFKGQYLMPNIGYG 60
Query: 215 SNKKTRHMLPNGF 253
SNK+TRHMLP GF
Sbjct: 61 SNKRTRHMLPTGF 73
Score = 101 bits (241), Expect = 2e-21
Identities = 48/65 (73%), Positives = 54/65 (83%)
Frame = +1
Query: 241 PKWIPKVLVHNVKELEILMMQNRKYCAEIAHGVSSKKRKLIVERAQQLSIRVTNAAARLR 420
P K LVHNV+ELE+L+MQNR YC EIAHGVSSKKRK IVERA+QLS+R+TN RLR
Sbjct: 70 PTGFKKFLVHNVRELEVLLMQNRVYCGEIAHGVSSKKRKEIVERAKQLSVRLTNPNGRLR 129
Query: 421 SQENE 435
SQENE
Sbjct: 130 SQENE 134
>X00848-1|CAA25404.1| 133|Drosophila melanogaster ribosomal protein
49 protein.
Length = 133
Score = 138 bits (333), Expect = 1e-32
Identities = 61/73 (83%), Positives = 63/73 (86%)
Frame = +2
Query: 35 MAIRPVYRPTIVKKRTKRFIRHQSDRYDKLKRNWRKPRGIDNRVRRRFKGQYLMPNIGYG 214
M IRP YRP IVKKRTK FIRHQSDRY KL WRKP+GIDNRV RRFKGQYLMPNIGYG
Sbjct: 1 MTIRPAYRPKIVKKRTKDFIRHQSDRYAKLSHKWRKPKGIDNRVGRRFKGQYLMPNIGYG 60
Query: 215 SNKKTRHMLPNGF 253
SNK+TRHMLP GF
Sbjct: 61 SNKRTRHMLPTGF 73
Score = 48.4 bits (110), Expect = 1e-05
Identities = 25/51 (49%), Positives = 34/51 (66%)
Frame = +1
Query: 241 PKWIPKVLVHNVKELEILMMQNRKYCAEIAHGVSSKKRKLIVERAQQLSIR 393
P K LVHNV+ELE+L+MQN + E+ S + K I+ERA+QLS+R
Sbjct: 70 PTGFKKFLVHNVRELEVLLMQNPRLLREMP-TASPPRSKEIIERAKQLSLR 119
>BT030157-1|ABN49296.1| 126|Drosophila melanogaster IP17707p
protein.
Length = 126
Score = 35.5 bits (78), Expect = 0.10
Identities = 17/37 (45%), Positives = 23/37 (62%)
Frame = +1
Query: 151 Y*QQSPQAVQGSILDAQHWLRFQQEDPSYAPKWIPKV 261
Y QQS +QG++ DAQH LR +Q P +A I +V
Sbjct: 7 YRQQSASPLQGTVSDAQHRLRIEQAHPPHAAHRIQEV 43
Score = 32.3 bits (70), Expect = 0.94
Identities = 21/61 (34%), Positives = 30/61 (49%)
Frame = +3
Query: 261 PSSQC*RAGNLDDAKQEVLRRDRSWCLFEEAEADRGKSPAAQHQSDECGRSPPLPGE*IN 440
P +Q RAG A+ +LRRDR L +EA+ D AA + RSP E ++
Sbjct: 44 PGAQRARAGGPAHAEPRLLRRDRPRRLLQEAQGDCRARQAAVGPPHQPQRSPAFSRERVS 103
Query: 441 I 443
+
Sbjct: 104 L 104
>AY061327-1|AAL28875.1| 719|Drosophila melanogaster LD24749p
protein.
Length = 719
Score = 31.9 bits (69), Expect = 1.2
Identities = 17/54 (31%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Frame = +2
Query: 398 RMRPLASA-PRRMNKYNCXXXXXXXNSRGGPVPNSPYSSRITIHWPSFYNVVTG 556
++ P+ S P+ Y+C NSR G +P S S + H+P F N +G
Sbjct: 401 KLPPVGSPFPKPAYSYSCLIALALKNSRAGSLPVSEIYSFLCQHFPYFENAPSG 454
>AJ243916-1|CAB51032.1| 719|Drosophila melanogaster DOMINA protein
(WHN-homologue) protein.
Length = 719
Score = 31.9 bits (69), Expect = 1.2
Identities = 17/54 (31%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Frame = +2
Query: 398 RMRPLASA-PRRMNKYNCXXXXXXXNSRGGPVPNSPYSSRITIHWPSFYNVVTG 556
++ P+ S P+ Y+C NSR G +P S S + H+P F N +G
Sbjct: 401 KLPPVGSPFPKPAYSYSCLIALALKNSRAGSLPVSEIYSFLCQHFPYFENAPSG 454
>AJ243814-1|CAB51073.1| 719|Drosophila melanogaster DOMINA protein
protein.
Length = 719
Score = 31.9 bits (69), Expect = 1.2
Identities = 17/54 (31%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Frame = +2
Query: 398 RMRPLASA-PRRMNKYNCXXXXXXXNSRGGPVPNSPYSSRITIHWPSFYNVVTG 556
++ P+ S P+ Y+C NSR G +P S S + H+P F N +G
Sbjct: 401 KLPPVGSPFPKPAYSYSCLIALALKNSRAGSLPVSEIYSFLCQHFPYFENAPSG 454
>AF264033-1|AAF91395.1| 719|Drosophila melanogaster winged-helix
protein jumeaux protein.
Length = 719
Score = 31.9 bits (69), Expect = 1.2
Identities = 17/54 (31%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Frame = +2
Query: 398 RMRPLASA-PRRMNKYNCXXXXXXXNSRGGPVPNSPYSSRITIHWPSFYNVVTG 556
++ P+ S P+ Y+C NSR G +P S S + H+P F N +G
Sbjct: 401 KLPPVGSPFPKPAYSYSCLIALALKNSRAGSLPVSEIYSFLCQHFPYFENAPSG 454
>AE014297-1143|AAF54525.1| 719|Drosophila melanogaster CG4029-PA
protein.
Length = 719
Score = 31.9 bits (69), Expect = 1.2
Identities = 17/54 (31%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Frame = +2
Query: 398 RMRPLASA-PRRMNKYNCXXXXXXXNSRGGPVPNSPYSSRITIHWPSFYNVVTG 556
++ P+ S P+ Y+C NSR G +P S S + H+P F N +G
Sbjct: 401 KLPPVGSPFPKPAYSYSCLIALALKNSRAGSLPVSEIYSFLCQHFPYFENAPSG 454
>AB028890-1|BAA94598.1| 719|Drosophila melanogaster Winged-helix
nude transcriptionfactor protein.
Length = 719
Score = 31.9 bits (69), Expect = 1.2
Identities = 17/54 (31%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Frame = +2
Query: 398 RMRPLASA-PRRMNKYNCXXXXXXXNSRGGPVPNSPYSSRITIHWPSFYNVVTG 556
++ P+ S P+ Y+C NSR G +P S S + H+P F N +G
Sbjct: 401 KLPPVGSPFPKPAYSYSCLIALALKNSRAGSLPVSEIYSFLCQHFPYFENAPSG 454
>AE014296-2194|AAN11859.1| 1257|Drosophila melanogaster CG11006-PB,
isoform B protein.
Length = 1257
Score = 29.5 bits (63), Expect = 6.6
Identities = 16/38 (42%), Positives = 20/38 (52%)
Frame = +2
Query: 551 TGKTLALPNLIALQHIPLSPAGVIAKRPAPIALPNSCA 664
TG A +L++ H PL GVI K P LP+S A
Sbjct: 26 TGSLSASASLVSHSHPPLQLRGVINKYSLPSHLPSSAA 63
>AE014296-2193|AAN11858.1| 1294|Drosophila melanogaster CG11006-PC,
isoform C protein.
Length = 1294
Score = 29.5 bits (63), Expect = 6.6
Identities = 16/38 (42%), Positives = 20/38 (52%)
Frame = +2
Query: 551 TGKTLALPNLIALQHIPLSPAGVIAKRPAPIALPNSCA 664
TG A +L++ H PL GVI K P LP+S A
Sbjct: 63 TGSLSASASLVSHSHPPLQLRGVINKYSLPSHLPSSAA 100
>AE014296-2192|AAN11860.2| 1272|Drosophila melanogaster CG11006-PD,
isoform D protein.
Length = 1272
Score = 29.5 bits (63), Expect = 6.6
Identities = 16/38 (42%), Positives = 20/38 (52%)
Frame = +2
Query: 551 TGKTLALPNLIALQHIPLSPAGVIAKRPAPIALPNSCA 664
TG A +L++ H PL GVI K P LP+S A
Sbjct: 41 TGSLSASASLVSHSHPPLQLRGVINKYSLPSHLPSSAA 78
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 39,515,441
Number of Sequences: 53049
Number of extensions: 837852
Number of successful extensions: 2121
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 2029
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2120
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4403028645
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -