Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= psV30432.Seq
(857 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P52813 Cluster: 40S ribosomal protein S3a; n=17; Eukary... 140 3e-32
UniRef50_A6NFQ6 Cluster: Uncharacterized protein ENSP00000341960... 98 2e-19
UniRef50_P61247 Cluster: 40S ribosomal protein S3a; n=209; Eukar... 97 5e-19
UniRef50_UPI000041A636 Cluster: PREDICTED: similar to ribosomal ... 93 1e-17
UniRef50_Q5EMY6 Cluster: 40S ribosomal protein S1-like protein; ... 86 1e-15
UniRef50_A7NWS5 Cluster: Chromosome chr5 scaffold_2, whole genom... 82 2e-14
UniRef50_UPI000049A095 Cluster: 40S ribosomal protein S3a; n=3; ... 79 1e-13
UniRef50_Q54ZW5 Cluster: 40S ribosomal protein S3A; n=2; Dictyos... 78 2e-13
UniRef50_UPI00005042B8 Cluster: UPI00005042B8 related cluster; n... 78 3e-13
UniRef50_Q23DE3 Cluster: Ribosomal S3Ae family protein; n=1; Tet... 71 5e-11
UniRef50_A3F4R3 Cluster: Ribosomal protein S3a; n=1; Taenia asia... 69 1e-10
UniRef50_A2FDS0 Cluster: Ribosomal protein S3Ae, putative; n=4; ... 64 6e-09
UniRef50_A0CCR3 Cluster: Chromosome undetermined scaffold_168, w... 62 2e-08
UniRef50_A4D1I1 Cluster: Similar to ribosomal protein S3a; 40S r... 62 2e-08
UniRef50_Q8SS05 Cluster: 40S RIBOSOMAL PROTEIN S3A; n=1; Encepha... 56 2e-06
UniRef50_Q9AW90 Cluster: 40S ribosomal Protein S3a; n=1; Guillar... 54 3e-06
UniRef50_Q9U4U0 Cluster: Antigen; n=10; Trypanosomatidae|Rep: An... 54 3e-06
UniRef50_UPI00015608D3 Cluster: PREDICTED: similar to ribosomal ... 54 6e-06
UniRef50_Q7QT21 Cluster: GLP_675_17761_17015; n=1; Giardia lambl... 49 1e-04
UniRef50_Q8Q0F2 Cluster: 30S ribosomal protein S3Ae; n=6; Euryar... 47 5e-04
UniRef50_Q3SAA8 Cluster: SSU ribosomal protein S3AE; n=2; enviro... 38 0.32
UniRef50_A7D401 Cluster: Ribosomal protein S3Ae; n=2; Halorubrum... 37 0.57
UniRef50_A6FVI8 Cluster: Surface repeat protein, putative; n=2; ... 36 1.7
UniRef50_Q0W2K9 Cluster: 30S ribosomal protein S3AE; n=2; Euryar... 36 1.7
UniRef50_UPI000155EEEB Cluster: PREDICTED: similar to leukocyte ... 35 3.0
UniRef50_Q8TVD1 Cluster: 30S ribosomal protein S3Ae; n=1; Methan... 35 3.0
UniRef50_A7S0H0 Cluster: Predicted protein; n=1; Nematostella ve... 34 5.3
UniRef50_Q5V296 Cluster: 30S ribosomal protein S3Ae; n=4; Haloba... 34 5.3
UniRef50_O27964 Cluster: 30S ribosomal protein S3Ae; n=1; Archae... 33 7.0
UniRef50_UPI000034E948 Cluster: UPI000034E948 related cluster; n... 33 9.2
UniRef50_UPI00015A7D76 Cluster: Centaurin-delta 1 (Cnt-d1) (Arf-... 33 9.2
UniRef50_Q4RMW5 Cluster: Chromosome 3 SCAF15018, whole genome sh... 33 9.2
>UniRef50_P52813 Cluster: 40S ribosomal protein S3a; n=17;
Eukaryota|Rep: 40S ribosomal protein S3a - Anopheles
gambiae (African malaria mosquito)
Length = 269
Score = 140 bits (340), Expect = 3e-32
Identities = 97/254 (38%), Positives = 125/254 (49%), Gaps = 8/254 (3%)
Frame = -3
Query: 771 SLSRLSTPFIRKGXVRCQGPVYVQQEASRHHACXPSPGXEXCFXGLKGRVFEVSLADLQA 592
S ++ PF RK + P + + G + GLKGRVFEVSLADLQ
Sbjct: 17 SKKKVVDPFTRKDWYDVKAPNMFKNRQVGKTLVNRTQGTKIASDGLKGRVFEVSLADLQN 76
Query: 591 DIDAERSFRKFRLIAEYVQGRNVLCNFQAWTSQPISSGGWLKNGRLSSKPTLM*RQPMDT 412
+ DAERSFRKF+L+AE V GR+VL NF +K + + ++ + D
Sbjct: 77 EPDAERSFRKFKLVAESVNGRDVLTNFHGMALTTDKLRSMVKKWQTLIECSVDVKTT-DG 135
Query: 411 FYVSSALVSXXXXXXXXXXXXXXAHSGQSNQKENV*NHYTRRH*L*T--QGGGEQLIPDS 238
F + + A Q +R T +G E+L+PDS
Sbjct: 136 FMLRVFCIGFTIKDSMSQRKTCYAQHSQIKNIRAKMTAIIKREITSTDLKGVVEKLLPDS 195
Query: 237 IAKDIEKACHGIYPLRDVCIRKVKVLKRPRFEISKLMELHXXXXXXXXXXGDKS------ 76
IAKDIEKAC +YPL DV IRKVKVLK+PRF++S LMELH +
Sbjct: 196 IAKDIEKACQVVYPLHDVYIRKVKVLKKPRFDLSSLMELHGDGGGKAAEVSTGAASGVVV 255
Query: 75 ERPEGYEPPVQESV 34
+RPEGYEPPVQ SV
Sbjct: 256 DRPEGYEPPVQASV 269
Score = 94.7 bits (225), Expect = 3e-18
Identities = 43/52 (82%), Positives = 48/52 (92%)
Frame = -2
Query: 508 GMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKT 353
GM LTTDKLR MVKKWQTLIE ++DVKTTDG++LRVFCIGFT KDS+SQRKT
Sbjct: 105 GMALTTDKLRSMVKKWQTLIECSVDVKTTDGFMLRVFCIGFTIKDSMSQRKT 156
Score = 39.1 bits (87), Expect = 0.14
Identities = 16/31 (51%), Positives = 25/31 (80%)
Frame = -1
Query: 350 YAQHTQVRAIRKKMCEIITRDVTNSELREVV 258
YAQH+Q++ IR KM II R++T+++L+ VV
Sbjct: 158 YAQHSQIKNIRAKMTAIIKREITSTDLKGVV 188
>UniRef50_A6NFQ6 Cluster: Uncharacterized protein ENSP00000341960;
n=40; Coelomata|Rep: Uncharacterized protein
ENSP00000341960 - Homo sapiens (Human)
Length = 79
Score = 98.3 bits (234), Expect = 2e-19
Identities = 50/78 (64%), Positives = 56/78 (71%), Gaps = 4/78 (5%)
Frame = -3
Query: 255 QLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFEISKLMELHXXXXXXXXXXGD-- 82
+LIPDSI KDIEKAC IYPL DV +RKVK+LK+P+FE+ KLMELH GD
Sbjct: 2 KLIPDSIGKDIEKACQSIYPLHDVFVRKVKMLKKPKFELGKLMELHGDSSSSGKAIGDET 61
Query: 81 --KSERPEGYEPPVQESV 34
K ER EGYEPPVQESV
Sbjct: 62 GAKVERAEGYEPPVQESV 79
>UniRef50_P61247 Cluster: 40S ribosomal protein S3a; n=209;
Eukaryota|Rep: 40S ribosomal protein S3a - Homo sapiens
(Human)
Length = 264
Score = 97.1 bits (231), Expect = 5e-19
Identities = 49/78 (62%), Positives = 56/78 (71%), Gaps = 4/78 (5%)
Frame = -3
Query: 255 QLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFEISKLMELHXXXXXXXXXXGD-- 82
+LIPDSI KDIEKAC IYPL DV +RKVK+LK+P+FE+ KLMELH GD
Sbjct: 187 KLIPDSIGKDIEKACQSIYPLHDVFVRKVKMLKKPKFELGKLMELHGEGSSSGKATGDET 246
Query: 81 --KSERPEGYEPPVQESV 34
K ER +GYEPPVQESV
Sbjct: 247 GAKVERADGYEPPVQESV 264
Score = 85.0 bits (201), Expect = 2e-15
Identities = 39/75 (52%), Positives = 51/75 (68%)
Frame = -2
Query: 526 CALQLPGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTXT 347
C GMDLT DK+ MVKKWQT+IEA++DVKTTDGY+LR+FC+GFT K + RKT
Sbjct: 96 CLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCVGFTKKRNNQIRKTSY 155
Query: 346 PSTLRSEQSERKCVK 302
+ Q +K ++
Sbjct: 156 AQHQQVRQIRKKMME 170
Score = 59.7 bits (138), Expect = 9e-08
Identities = 36/80 (45%), Positives = 43/80 (53%)
Frame = -3
Query: 750 PFIRKGXVRCQGPVYVQQEASRHHACXPSPGXEXCFXGLKGRVFEVSLADLQADIDAERS 571
PF +K + P + G + GLKGRVFEVSLADLQ D E +
Sbjct: 24 PFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQND---EVA 80
Query: 570 FRKFRLIAEYVQGRNVLCNF 511
FRKF+LI E VQG+N L NF
Sbjct: 81 FRKFKLITEDVQGKNCLTNF 100
Score = 49.2 bits (112), Expect = 1e-04
Identities = 22/32 (68%), Positives = 27/32 (84%)
Frame = -1
Query: 350 YAQHTQVRAIRKKMCEIITRDVTNSELREVVN 255
YAQH QVR IRKKM EI+TR+V ++L+EVVN
Sbjct: 155 YAQHQQVRQIRKKMMEIMTREVQTNDLKEVVN 186
Score = 42.3 bits (95), Expect = 0.015
Identities = 20/32 (62%), Positives = 23/32 (71%)
Frame = -1
Query: 737 KDXSDVKAPSMFSKRQVGTTLVXRPQGXKXAS 642
KD DVKAP+MF+ R +G TLV R QG K AS
Sbjct: 28 KDWYDVKAPAMFNIRNIGKTLVTRTQGTKIAS 59
>UniRef50_UPI000041A636 Cluster: PREDICTED: similar to ribosomal
protein S3a isoform 5; n=18; Eutheria|Rep: PREDICTED:
similar to ribosomal protein S3a isoform 5 - Homo
sapiens
Length = 211
Score = 92.7 bits (220), Expect = 1e-17
Identities = 47/78 (60%), Positives = 55/78 (70%), Gaps = 4/78 (5%)
Frame = -3
Query: 255 QLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFEISKLMELHXXXXXXXXXXGD-- 82
+LIPDSI KD+EKAC IYPL DV +RKVK+LK+P+FE+ KLMELH GD
Sbjct: 134 KLIPDSIGKDVEKACQSIYPLHDVFVRKVKMLKKPKFELGKLMELHGEGCSSGKATGDET 193
Query: 81 --KSERPEGYEPPVQESV 34
K ER +GYE PVQESV
Sbjct: 194 GVKVERADGYELPVQESV 211
Score = 53.2 bits (122), Expect = 8e-06
Identities = 32/52 (61%), Positives = 36/52 (69%), Gaps = 2/52 (3%)
Frame = -3
Query: 630 GRVFEVSLADLQADIDAERSFRKFRLIAEYVQGRNVLCNFQA--WTSQPISS 481
GRVFEVSLADLQ D E +FRKF+LI E VQG+N L NF TS I+S
Sbjct: 61 GRVFEVSLADLQND---EVAFRKFKLITEDVQGKNCLTNFHGVDLTSDKITS 109
Score = 40.3 bits (90), Expect = 0.061
Identities = 19/32 (59%), Positives = 22/32 (68%)
Frame = -1
Query: 737 KDXSDVKAPSMFSKRQVGTTLVXRPQGXKXAS 642
KD DV AP+MF+ R +G TLV R QG K AS
Sbjct: 28 KDWYDVNAPAMFNIRNIGKTLVTRTQGTKIAS 59
Score = 34.7 bits (76), Expect = 3.0
Identities = 15/23 (65%), Positives = 20/23 (86%)
Frame = -1
Query: 323 IRKKMCEIITRDVTNSELREVVN 255
IRKKM EI+TR+V ++L+EVVN
Sbjct: 111 IRKKMMEIMTREVQTNDLKEVVN 133
>UniRef50_Q5EMY6 Cluster: 40S ribosomal protein S1-like protein;
n=9; Dikarya|Rep: 40S ribosomal protein S1-like protein
- Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 256
Score = 85.8 bits (203), Expect = 1e-15
Identities = 69/215 (32%), Positives = 99/215 (46%), Gaps = 4/215 (1%)
Frame = -3
Query: 750 PFIRKGXVRCQGPVYVQQEASRHHACXPSPGXEXCFXGLKGRVFEVSLADLQADIDAERS 571
PF RK + P S G + LKGR+FEVSLADLQ D D +
Sbjct: 23 PFARKDWYGIKAPAPFNIRDVGKTLVNRSSGMKNANDALKGRIFEVSLADLQKDED--HA 80
Query: 570 FRKFRLIAEYVQGRNVLCNFQA--WTSQPISSGGWLKNGRLSSKPTLM*RQPMDTFYVSS 397
FRK +L + VQG+N L NF +TS + S + + T+ + D + +
Sbjct: 81 FRKIKLRVDEVQGKNCLTNFHGLDFTSDKLRSLVRKWQSLIEANVTV---KTTDDYLLRL 137
Query: 396 ALVSXXXXXXXXXXXXXXAHSGQSNQKENV*NHYTRRH*--L*TQGGGEQLIPDSIAKDI 223
++ A S Q +R Q +LIP+ I ++I
Sbjct: 138 FAIAVTKRRPNQIKKTTYAASSQIRAIRRKMTEIIQREASTCTLQQLTNKLIPEVIGREI 197
Query: 222 EKACHGIYPLRDVCIRKVKVLKRPRFEISKLMELH 118
EKA GIYPL++V IRKVK+LK+P+F++ L+ LH
Sbjct: 198 EKATQGIYPLQNVHIRKVKLLKQPKFDLGGLLALH 232
Score = 69.3 bits (162), Expect = 1e-10
Identities = 33/83 (39%), Positives = 49/83 (59%)
Frame = -2
Query: 526 CALQLPGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTXT 347
C G+D T+DKLR +V+KWQ+LIEAN+ VKTTD Y+LR+F I T + +KT
Sbjct: 96 CLTNFHGLDFTSDKLRSLVRKWQSLIEANVTVKTTDDYLLRLFAIAVTKRRPNQIKKTTY 155
Query: 346 PSTLRSEQSERKCVKSLHATSLT 278
++ + RK + + + T
Sbjct: 156 AASSQIRAIRRKMTEIIQREAST 178
Score = 35.9 bits (79), Expect = 1.3
Identities = 15/32 (46%), Positives = 23/32 (71%)
Frame = -1
Query: 350 YAQHTQVRAIRKKMCEIITRDVTNSELREVVN 255
YA +Q+RAIR+KM EII R+ + L+++ N
Sbjct: 155 YAASSQIRAIRRKMTEIIQREASTCTLQQLTN 186
>UniRef50_A7NWS5 Cluster: Chromosome chr5 scaffold_2, whole genome
shotgun sequence; n=3; core eudicotyledons|Rep:
Chromosome chr5 scaffold_2, whole genome shotgun
sequence - Vitis vinifera (Grape)
Length = 656
Score = 82.2 bits (194), Expect = 2e-14
Identities = 38/66 (57%), Positives = 46/66 (69%)
Frame = -2
Query: 508 GMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTXTPSTLRS 329
GMD TTDKLR +V+KWQTLIEA++DVKTTD Y LR+FCI FT K +KT + +
Sbjct: 497 GMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYTLRLFCIAFTKKRVNQNKKTCYAQSSQI 556
Query: 328 EQSERK 311
Q RK
Sbjct: 557 RQIRRK 562
Score = 65.3 bits (152), Expect = 2e-09
Identities = 36/75 (48%), Positives = 49/75 (65%)
Frame = -3
Query: 258 EQLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFEISKLMELHXXXXXXXXXXGDK 79
++ IP+SI ++IEKA IYPL++V IRKVK+LK P+F++ KLME+H G K
Sbjct: 581 KKFIPESIGREIEKATSSIYPLQNVYIRKVKILKAPKFDLGKLMEVH---GDYSEDVGTK 637
Query: 78 SERPEGYEPPVQESV 34
ERP + PV E V
Sbjct: 638 LERPA--DEPVAEGV 650
Score = 60.9 bits (141), Expect = 4e-08
Identities = 36/84 (42%), Positives = 47/84 (55%)
Frame = -3
Query: 762 RLSTPFIRKGXVRCQGPVYVQQEASRHHACXPSPGXEXCFXGLKGRVFEVSLADLQADID 583
+ + PF +K + P + + G + GLK RVFE+SLADLQAD D
Sbjct: 414 KAADPFAKKDWYDIKAPSVFEVRNVGKTLVSRTQGTKIASEGLKHRVFEISLADLQADED 473
Query: 582 AERSFRKFRLIAEYVQGRNVLCNF 511
+++RK RL AE VQGRNVL NF
Sbjct: 474 --QAYRKIRLRAEDVQGRNVLTNF 495
Score = 41.9 bits (94), Expect = 0.020
Identities = 20/32 (62%), Positives = 22/32 (68%)
Frame = -1
Query: 737 KDXSDVKAPSMFSKRQVGTTLVXRPQGXKXAS 642
KD D+KAPS+F R VG TLV R QG K AS
Sbjct: 422 KDWYDIKAPSVFEVRNVGKTLVSRTQGTKIAS 453
Score = 37.9 bits (84), Expect = 0.32
Identities = 21/57 (36%), Positives = 35/57 (61%)
Frame = -1
Query: 428 DNRWIRSTCLLHWFHQ*GLLEPTQDVYAQHTQVRAIRKKMCEIITRDVTNSELREVV 258
DN +R C+ F + + + + YAQ +Q+R IR+KM EI+T T+ +L+E+V
Sbjct: 526 DNYTLRLFCIA--FTKKRVNQNKKTCYAQSSQIRQIRRKMREIMTNMATSCDLKELV 580
>UniRef50_UPI000049A095 Cluster: 40S ribosomal protein S3a; n=3;
Entamoeba histolytica HM-1:IMSS|Rep: 40S ribosomal
protein S3a - Entamoeba histolytica HM-1:IMSS
Length = 257
Score = 79.0 bits (186), Expect = 1e-13
Identities = 34/58 (58%), Positives = 46/58 (79%)
Frame = -2
Query: 526 CALQLPGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKT 353
C + G+ LTTDKLR +VKKW TLIE ++DVKTTDG+++R+FCIGFT++ S +KT
Sbjct: 98 CLMIFHGLKLTTDKLRSIVKKWCTLIETSVDVKTTDGHLIRIFCIGFTSRKSNQIKKT 155
>UniRef50_Q54ZW5 Cluster: 40S ribosomal protein S3A; n=2;
Dictyostelium discoideum|Rep: 40S ribosomal protein S3A
- Dictyostelium discoideum AX4
Length = 273
Score = 78.2 bits (184), Expect = 2e-13
Identities = 39/74 (52%), Positives = 47/74 (63%)
Frame = -2
Query: 508 GMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTXTPSTLRS 329
GMDLT+DKLR ++ KW TLIE +DVKTTDGY LRVF I FT K ++KT T R
Sbjct: 101 GMDLTSDKLRSLIHKWSTLIECFVDVKTTDGYFLRVFAICFTKKGESQKKKTSYAKTSRV 160
Query: 328 EQSERKCVKSLHAT 287
+ +K V L T
Sbjct: 161 KAIRKKMVDILTET 174
Score = 54.0 bits (124), Expect = 5e-06
Identities = 35/84 (41%), Positives = 46/84 (54%), Gaps = 4/84 (4%)
Frame = -3
Query: 750 PFIRKGXVRCQGPV-YVQQEASRHHACXP---SPGXEXCFXGLKGRVFEVSLADLQADID 583
PF RK + P + + A P + G + GLKGRV+EVSLAD++ D
Sbjct: 18 PFTRKEWYVVRAPTQFFKSPADNKVGFTPVNRTQGTKLASDGLKGRVYEVSLADMKDD-- 75
Query: 582 AERSFRKFRLIAEYVQGRNVLCNF 511
+ FRK +L AE V+GRNVL NF
Sbjct: 76 ESQVFRKIKLRAEEVEGRNVLTNF 99
Score = 38.7 bits (86), Expect = 0.19
Identities = 18/41 (43%), Positives = 28/41 (68%)
Frame = -3
Query: 240 SIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFEISKLMELH 118
++A+ I I+P+ +V IRKVKVLK P+ + +KL EL+
Sbjct: 205 TLAEKIRIEGSSIFPIHNVFIRKVKVLKTPKVDAAKLSELY 245
Score = 36.3 bits (80), Expect = 0.99
Identities = 15/32 (46%), Positives = 27/32 (84%)
Frame = -1
Query: 350 YAQHTQVRAIRKKMCEIITRDVTNSELREVVN 255
YA+ ++V+AIRKKM +I+T V++++L+ VV+
Sbjct: 154 YAKTSRVKAIRKKMVDILTETVSSNDLKTVVD 185
>UniRef50_UPI00005042B8 Cluster: UPI00005042B8 related cluster; n=1;
Rattus norvegicus|Rep: UPI00005042B8 UniRef100 entry -
Rattus norvegicus
Length = 237
Score = 77.8 bits (183), Expect = 3e-13
Identities = 38/74 (51%), Positives = 51/74 (68%)
Frame = -3
Query: 255 QLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFEISKLMELHXXXXXXXXXXGDKS 76
+L+PD++ KD+EKAC IYPL DV +RKVK+L++P+ ++ KL ELH KS
Sbjct: 170 KLVPDNVGKDVEKACQFIYPLHDVFVRKVKILQKPKLDLGKLPELHALGLHGSHR---KS 226
Query: 75 ERPEGYEPPVQESV 34
+R YEPPVQESV
Sbjct: 227 DR---YEPPVQESV 237
Score = 50.4 bits (115), Expect = 6e-05
Identities = 24/42 (57%), Positives = 31/42 (73%)
Frame = -2
Query: 508 GMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFT 383
GMDLT DK V KWQ ++EA+ DVKT D Y+L +FC+G+T
Sbjct: 87 GMDLTWDKRCNKVIKWQ-MVEAHADVKTADYYLLCLFCVGYT 127
Score = 37.9 bits (84), Expect = 0.32
Identities = 22/42 (52%), Positives = 27/42 (64%)
Frame = -3
Query: 639 GLKGRVFEVSLADLQADIDAERSFRKFRLIAEYVQGRNVLCN 514
GL G VFE SLA LQ D + RKF+LI E ++G+N L N
Sbjct: 46 GLNGLVFEASLASLQND---KVVVRKFKLITEDMRGKNGLTN 84
>UniRef50_Q23DE3 Cluster: Ribosomal S3Ae family protein; n=1;
Tetrahymena thermophila SB210|Rep: Ribosomal S3Ae family
protein - Tetrahymena thermophila SB210
Length = 265
Score = 70.5 bits (165), Expect = 5e-11
Identities = 33/77 (42%), Positives = 50/77 (64%)
Frame = -2
Query: 508 GMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTXTPSTLRS 329
G+D+T D+L M++KWQTLIEA +D KT DGY++RVF + FT K S K + ST +
Sbjct: 105 GLDITRDRLCSMIRKWQTLIEARVDCKTNDGYIIRVFTLAFTKKTSAG--KQSSTSTCYA 162
Query: 328 EQSERKCVKSLHATSLT 278
+ S+ + ++ T +T
Sbjct: 163 KSSQVRAIRRKINTFIT 179
Score = 50.0 bits (114), Expect = 8e-05
Identities = 22/47 (46%), Positives = 33/47 (70%)
Frame = -3
Query: 258 EQLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFEISKLMELH 118
+ LI + K IEK I+PL+++ IRKVKVLKRP+ + +K+ EL+
Sbjct: 192 KNLIGEDYTKKIEKETKNIFPLQNITIRKVKVLKRPKLDATKIAELY 238
Score = 40.3 bits (90), Expect = 0.061
Identities = 25/84 (29%), Positives = 40/84 (47%)
Frame = -3
Query: 762 RLSTPFIRKGXVRCQGPVYVQQEASRHHACXPSPGXEXCFXGLKGRVFEVSLADLQADID 583
R P RK + P+ ++ S G +KGRV E +LADL+ D
Sbjct: 21 RTIDPLSRKEWYDFRAPIPFSSKSFGKTLVTKSSGNRIASEEIKGRVVESTLADLK-DNS 79
Query: 582 AERSFRKFRLIAEYVQGRNVLCNF 511
++++RK +L+ + V GRN +F
Sbjct: 80 NDKAWRKVKLVIDEVDGRNAKTSF 103
>UniRef50_A3F4R3 Cluster: Ribosomal protein S3a; n=1; Taenia
asiatica|Rep: Ribosomal protein S3a - Taenia asiatica
(Asian tapeworm)
Length = 183
Score = 69.3 bits (162), Expect = 1e-10
Identities = 36/75 (48%), Positives = 44/75 (58%)
Frame = -2
Query: 526 CALQLPGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTXT 347
C GMDLT DKL MV KWQ+ IEA++DVKTTDGY LR F I FT K Q+
Sbjct: 22 CLTNFHGMDLTHDKLCGMVLKWQSTIEAHVDVKTTDGYTLRFFVIAFTKKQE-DQKSHAY 80
Query: 346 PSTLRSEQSERKCVK 302
T R ++ + V+
Sbjct: 81 AQTTRIKKLRAEIVE 95
Score = 62.1 bits (144), Expect = 2e-08
Identities = 30/75 (40%), Positives = 46/75 (61%)
Frame = -3
Query: 258 EQLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFEISKLMELHXXXXXXXXXXGDK 79
++LIPDSI +D I+PL +RKVKVLK+P+ ++ +++ELH G+
Sbjct: 111 QKLIPDSIGQDAMNEASSIFPLSGALVRKVKVLKKPKLDLGRILELH--SEGKADEFGEG 168
Query: 78 SERPEGYEPPVQESV 34
RP+ YEPPV ++V
Sbjct: 169 VPRPDHYEPPVVDAV 183
>UniRef50_A2FDS0 Cluster: Ribosomal protein S3Ae, putative; n=4;
Trichomonas vaginalis G3|Rep: Ribosomal protein S3Ae,
putative - Trichomonas vaginalis G3
Length = 247
Score = 63.7 bits (148), Expect = 6e-09
Identities = 32/85 (37%), Positives = 53/85 (62%)
Frame = -2
Query: 550 RRICART*CALQLPGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDS 371
R I A + Q GM LT DKL +++K++T+I+A++D KT DG++LR+F IGFT K +
Sbjct: 84 RSIAAGSEVYTQFAGMRLTHDKLDSIMRKYRTMIDASVDAKTADGFILRLFTIGFTKKLA 143
Query: 370 LSQRKTXTPSTLRSEQSERKCVKSL 296
S + ++ ++ Q +K+L
Sbjct: 144 NSHKNHTYANSHKARQVRDVMIKAL 168
>UniRef50_A0CCR3 Cluster: Chromosome undetermined scaffold_168,
whole genome shotgun sequence; n=4; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_168,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 291
Score = 62.1 bits (144), Expect = 2e-08
Identities = 30/77 (38%), Positives = 43/77 (55%)
Frame = -2
Query: 532 T*CALQLPGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKT 353
T C G+D T DK+ M+KK QTLIE ++ ++ DGY+LR+F I FT QRKT
Sbjct: 93 TRCRTSFYGLDSTKDKIFGMIKKRQTLIETQVEARSQDGYILRIFVIAFTKSIKNQQRKT 152
Query: 352 XTPSTLRSEQSERKCVK 302
+ + +K V+
Sbjct: 153 TYAQRSQIKDIRKKIVE 169
Score = 59.7 bits (138), Expect = 9e-08
Identities = 57/216 (26%), Positives = 91/216 (42%), Gaps = 5/216 (2%)
Frame = -3
Query: 750 PFIRKGXVRCQGPVYVQQEASRHHACXPSPGXEXCFXGLKGRVFEVSLADLQADIDAERS 571
P RK PV + S G +KGRV E SLADLQ D + +
Sbjct: 21 PLARKEWFELTAPVPFAAGGFGYTCINKSAGTVVATEAIKGRVVEASLADLQGQSD-QMA 79
Query: 570 FRKFRLIAEYVQGRNVLCNFQAWTSQPISSGGWLKNGRLSSKPTLM*RQPMDTFYVSSAL 391
+RK +LI + V+G +F S G +K R + T + + D + + +
Sbjct: 80 WRKVKLIIDDVEGTRCRTSFYGLDSTKDKIFGMIKK-RQTLIETQVEARSQDGYILRIFV 138
Query: 390 VSXXXXXXXXXXXXXXAHSGQSNQ-----KENV*NHYTRRH*L*TQGGGEQLIPDSIAKD 226
++ A Q E V +++ G Q +S+AK+
Sbjct: 139 IAFTKSIKNQQRKTTYAQRSQIKDIRKKIVEIVLKEVSKKSITQLLGFFNQ---ESLAKE 195
Query: 225 IEKACHGIYPLRDVCIRKVKVLKRPRFEISKLMELH 118
I KA I+PL+++ +RKVK++KRP+ + KL E +
Sbjct: 196 IGKATRTIFPLQNITLRKVKLVKRPKVDAQKLREFY 231
>UniRef50_A4D1I1 Cluster: Similar to ribosomal protein S3a; 40S
ribosomal protein S3a; v-fos transformation effector
protein 1; n=2; Eutheria|Rep: Similar to ribosomal
protein S3a; 40S ribosomal protein S3a; v-fos
transformation effector protein 1 - Homo sapiens (Human)
Length = 119
Score = 62.1 bits (144), Expect = 2e-08
Identities = 32/57 (56%), Positives = 39/57 (68%), Gaps = 4/57 (7%)
Frame = -3
Query: 192 RDVCIRKVKVLKRPRFEISKLMELHXXXXXXXXXXGD----KSERPEGYEPPVQESV 34
R +C++KVK+LK+P+FE+ KLMELH GD K ER EGYEPPVQESV
Sbjct: 63 RVMCLKKVKMLKKPKFELGKLMELHGDSSSSGKAIGDETGAKVERAEGYEPPVQESV 119
>UniRef50_Q8SS05 Cluster: 40S RIBOSOMAL PROTEIN S3A; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S3A
- Encephalitozoon cuniculi
Length = 189
Score = 55.6 bits (128), Expect = 2e-06
Identities = 27/58 (46%), Positives = 35/58 (60%)
Frame = -2
Query: 526 CALQLPGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKT 353
C GM+LT+DK + M+KKW TLIEA D+ DG V RVF +G T + +KT
Sbjct: 48 CVGFFDGMELTSDKHKAMIKKWHTLIEAQKDIVAKDGSVFRVFVMGVTRRHPGYVKKT 105
Score = 33.1 bits (72), Expect = 9.2
Identities = 13/34 (38%), Positives = 24/34 (70%)
Frame = -3
Query: 258 EQLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLK 157
++L +++ K IE+ I+PL++ C+RKVK +K
Sbjct: 138 KKLANETVGKRIEELGSEIFPLQNCCVRKVKTIK 171
>UniRef50_Q9AW90 Cluster: 40S ribosomal Protein S3a; n=1; Guillardia
theta|Rep: 40S ribosomal Protein S3a - Guillardia theta
(Cryptomonas phi)
Length = 219
Score = 54.4 bits (125), Expect = 3e-06
Identities = 24/58 (41%), Positives = 35/58 (60%)
Frame = -2
Query: 526 CALQLPGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKT 353
C + G+ LT DK+ ++KKW TLIE ++ KT DGY L++F I + K + KT
Sbjct: 92 CFTKFHGLTLTRDKICSLIKKWHTLIEVEVNFKTKDGYFLKLFLIAQSKKPKNMKSKT 149
>UniRef50_Q9U4U0 Cluster: Antigen; n=10; Trypanosomatidae|Rep:
Antigen - Leishmania major
Length = 264
Score = 54.4 bits (125), Expect = 3e-06
Identities = 21/54 (38%), Positives = 35/54 (64%)
Frame = -2
Query: 517 QLPGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRK 356
Q M++TTDK+ +++KW T +E ++VKT DGY +R+F + FT + Q +
Sbjct: 102 QFHSMEVTTDKMANLLRKWCTTMETTVEVKTADGYTMRLFVVAFTKPQANQQSR 155
Score = 48.8 bits (111), Expect = 2e-04
Identities = 23/57 (40%), Positives = 31/57 (54%)
Frame = -3
Query: 675 CXPSPGXEXCFXGLKGRVFEVSLADLQADIDAERSFRKFRLIAEYVQGRNVLCNFQA 505
C + G L+GRVFE +LADL E ++RK R + VQGRN+L F +
Sbjct: 49 CNKTQGTRIAADVLRGRVFEANLADLNQSAGEEEAYRKVRFTVQEVQGRNLLTQFHS 105
Score = 37.5 bits (83), Expect = 0.43
Identities = 16/46 (34%), Positives = 30/46 (65%), Gaps = 1/46 (2%)
Frame = -3
Query: 252 LIPDSIAKD-IEKACHGIYPLRDVCIRKVKVLKRPRFEISKLMELH 118
L+ ++ D + + C+ I PLR++ IRKV+V++ P+F+ L+ H
Sbjct: 190 LLTRNVLSDALVRRCNPILPLRELRIRKVRVVRTPKFDAQALLSAH 235
>UniRef50_UPI00015608D3 Cluster: PREDICTED: similar to ribosomal
protein S3a; n=1; Equus caballus|Rep: PREDICTED: similar
to ribosomal protein S3a - Equus caballus
Length = 153
Score = 53.6 bits (123), Expect = 6e-06
Identities = 29/52 (55%), Positives = 36/52 (69%)
Frame = -3
Query: 660 GXEXCFXGLKGRVFEVSLADLQADIDAERSFRKFRLIAEYVQGRNVLCNFQA 505
G + GLKG VFE+SLADLQ D E +FRKF+LI E VQG+ L NF++
Sbjct: 54 GTKIASDGLKGGVFEMSLADLQND---EVAFRKFKLITEDVQGKRCLINFRS 102
Score = 41.1 bits (92), Expect = 0.035
Identities = 19/32 (59%), Positives = 23/32 (71%)
Frame = -1
Query: 737 KDXSDVKAPSMFSKRQVGTTLVXRPQGXKXAS 642
KD D+KAP+MF+ R +G TLV R QG K AS
Sbjct: 28 KDWYDMKAPAMFNIRNIGKTLVTRTQGTKIAS 59
>UniRef50_Q7QT21 Cluster: GLP_675_17761_17015; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_675_17761_17015 - Giardia lamblia
ATCC 50803
Length = 248
Score = 49.2 bits (112), Expect = 1e-04
Identities = 23/57 (40%), Positives = 33/57 (57%)
Frame = -2
Query: 526 CALQLPGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRK 356
C GMD+T K + +K I+ +D+ TTDGY+LRVF I FT++ +RK
Sbjct: 96 CLTNFHGMDITRHKYGSLFRKGCDCIDVFMDIPTTDGYLLRVFVIAFTDRFRFQRRK 152
>UniRef50_Q8Q0F2 Cluster: 30S ribosomal protein S3Ae; n=6;
Euryarchaeota|Rep: 30S ribosomal protein S3Ae -
Methanosarcina mazei (Methanosarcina frisia)
Length = 204
Score = 47.2 bits (107), Expect = 5e-04
Identities = 24/52 (46%), Positives = 36/52 (69%)
Frame = -2
Query: 514 LPGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQR 359
L G +LTTD +R +VK+ + I+AN+DV+T DG+V+RV FT K + S +
Sbjct: 82 LMGHELTTDYVRSIVKRQTSRIDANVDVRTKDGFVIRVKPTCFTIKRARSSQ 133
>UniRef50_Q3SAA8 Cluster: SSU ribosomal protein S3AE; n=2;
environmental samples|Rep: SSU ribosomal protein S3AE -
uncultured euryarchaeote Alv-FOS1
Length = 227
Score = 37.9 bits (84), Expect = 0.32
Identities = 19/65 (29%), Positives = 38/65 (58%)
Frame = -2
Query: 508 GMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTXTPSTLRS 329
G D+TTD +R M+++ ++ I+ +V+T+DGY +RV + ++ S KT ++
Sbjct: 88 GHDMTTDYIRRMIRRRRSRIDMIFNVETSDGYRMRVKVLTVPDRRIKSSIKTEIRKKIQE 147
Query: 328 EQSER 314
+E+
Sbjct: 148 YLTEK 152
>UniRef50_A7D401 Cluster: Ribosomal protein S3Ae; n=2;
Halorubrum|Rep: Ribosomal protein S3Ae - Halorubrum
lacusprofundi ATCC 49239
Length = 215
Score = 37.1 bits (82), Expect = 0.57
Identities = 21/50 (42%), Positives = 31/50 (62%), Gaps = 1/50 (2%)
Frame = -2
Query: 502 DLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDS-LSQRK 356
+LT D LR +V++ + +EA+I V TTD Y +RV + T K + SQ K
Sbjct: 83 ELTRDYLRSLVRRGASKVEASITVLTTDDYRIRVQPVALTTKKADRSQEK 132
>UniRef50_A6FVI8 Cluster: Surface repeat protein, putative; n=2;
cellular organisms|Rep: Surface repeat protein, putative
- Roseobacter sp. AzwK-3b
Length = 5954
Score = 35.5 bits (78), Expect = 1.7
Identities = 26/76 (34%), Positives = 37/76 (48%), Gaps = 1/76 (1%)
Frame = +1
Query: 61 ALRPFRLVSGFPLASTAFAVKFHQLR-DLETGPLQHFHLSDANIAQRVDAMAGLLDVLGN 237
AL RL + P+ V QL D+ TGP+ H + D Q V A GL+D+ GN
Sbjct: 5486 ALSVLRLGALVPVGPDGLGVALDQLDLDVTTGPV-HLNERDGIDLQSVIARDGLIDIFGN 5544
Query: 238 GVRNQLFTTSLSSELV 285
G+ +L+S+ V
Sbjct: 5545 GLMQVGTVRALASQPV 5560
>UniRef50_Q0W2K9 Cluster: 30S ribosomal protein S3AE; n=2;
Euryarchaeota|Rep: 30S ribosomal protein S3AE -
Uncultured methanogenic archaeon RC-I
Length = 225
Score = 35.5 bits (78), Expect = 1.7
Identities = 19/44 (43%), Positives = 28/44 (63%)
Frame = -2
Query: 508 GMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNK 377
G +LT D +R +VK+ + I+AN+ V T DG+ +RV I T K
Sbjct: 83 GHELTRDYMRSLVKRRTSKIDANVVVTTKDGFKVRVKPIVLTVK 126
>UniRef50_UPI000155EEEB Cluster: PREDICTED: similar to leukocyte
immunoglobulin-like receptor; n=2; Laurasiatheria|Rep:
PREDICTED: similar to leukocyte immunoglobulin-like
receptor - Equus caballus
Length = 618
Score = 34.7 bits (76), Expect = 3.0
Identities = 17/47 (36%), Positives = 20/47 (42%)
Frame = +3
Query: 126 PSTSRSRNGASSTLSPFGCKHRAEGRCHGRPSRCPWQWSQESTVHHL 266
P R A + P H RC+G PS P+ WSQ S HL
Sbjct: 175 PRIHHGRWQALFPVGPVNTSHGGTYRCYGSPSSYPYAWSQPSDPLHL 221
>UniRef50_Q8TVD1 Cluster: 30S ribosomal protein S3Ae; n=1;
Methanopyrus kandleri|Rep: 30S ribosomal protein S3Ae -
Methanopyrus kandleri
Length = 211
Score = 34.7 bits (76), Expect = 3.0
Identities = 21/69 (30%), Positives = 38/69 (55%), Gaps = 2/69 (2%)
Frame = -2
Query: 508 GMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDS-LSQRKTXTPSTLR 332
G L D +R +V++ + I+ IDV T DGY +RV + FT + + SQ++ +
Sbjct: 77 GHRLMRDYVRSLVRRGTSRIDGVIDVVTKDGYKVRVAGLAFTTRRAKTSQQRAIRKEMFK 136
Query: 331 -SEQSERKC 308
E++ ++C
Sbjct: 137 VIEENAKEC 145
>UniRef50_A7S0H0 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 652
Score = 33.9 bits (74), Expect = 5.3
Identities = 22/58 (37%), Positives = 34/58 (58%), Gaps = 7/58 (12%)
Frame = -1
Query: 602 IYKLTLTR-KGLSANSD*SPNMCKDVMCSATSRHGPH------NR*AQVDG*KMADSH 450
++KLT+T KGL+ + + N+ KDV + +R GP NR A++DG K +D H
Sbjct: 361 VFKLTVTDDKGLTGSGTVAVNVKKDVNQAPVARAGPDVVVHLPNRAAELDGSKSSDDH 418
>UniRef50_Q5V296 Cluster: 30S ribosomal protein S3Ae; n=4;
Halobacteriaceae|Rep: 30S ribosomal protein S3Ae -
Haloarcula marismortui (Halobacterium marismortui)
Length = 213
Score = 33.9 bits (74), Expect = 5.3
Identities = 19/50 (38%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Frame = -2
Query: 502 DLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDS-LSQRK 356
+LT D LR +V++ + +EA I V TTD Y +++ + T K + SQ K
Sbjct: 83 ELTRDYLRSLVRRGSSKVEAYITVLTTDDYRVQIQPVAVTTKKADASQEK 132
>UniRef50_O27964 Cluster: 30S ribosomal protein S3Ae; n=1;
Archaeoglobus fulgidus|Rep: 30S ribosomal protein S3Ae -
Archaeoglobus fulgidus
Length = 211
Score = 33.5 bits (73), Expect = 7.0
Identities = 18/57 (31%), Positives = 31/57 (54%)
Frame = -2
Query: 502 DLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTXTPSTLR 332
+LT + L + ++ + IE +DV T DGY LRV + FT + + +K + +R
Sbjct: 89 ELTREYLNSLTRRRTSKIEDIVDVTTADGYKLRVKSVVFTVRRCKTSQKRAIRAIMR 145
>UniRef50_UPI000034E948 Cluster: UPI000034E948 related cluster; n=3;
Bos taurus|Rep: UPI000034E948 UniRef100 entry - unknown
Length = 457
Score = 33.1 bits (72), Expect = 9.2
Identities = 14/32 (43%), Positives = 16/32 (50%)
Frame = +3
Query: 171 PFGCKHRAEGRCHGRPSRCPWQWSQESTVHHL 266
P H RC+G PS P+ WSQ S HL
Sbjct: 190 PVNTSHGGTYRCYGSPSSYPYVWSQPSDPLHL 221
>UniRef50_UPI00015A7D76 Cluster: Centaurin-delta 1 (Cnt-d1)
(Arf-GAP, Rho-GAP, ankyrin repeat and pleckstrin
homology domain-containing protein 2) (PARX protein).;
n=2; Danio rerio|Rep: Centaurin-delta 1 (Cnt-d1)
(Arf-GAP, Rho-GAP, ankyrin repeat and pleckstrin
homology domain-containing protein 2) (PARX protein). -
Danio rerio
Length = 936
Score = 33.1 bits (72), Expect = 9.2
Identities = 20/51 (39%), Positives = 31/51 (60%), Gaps = 2/51 (3%)
Frame = -1
Query: 320 RKKMCEIITRDVTNSEL-REVVNS*FLTPLPRTSRRPAMASTLCAMF-ASE 174
++K +++ T EL ++ +N+ FL PR SRRPA A +CA+ ASE
Sbjct: 175 KRKYKKVLNGLNTQEELNKKALNARFLRAGPRESRRPAFAHCVCALLCASE 225
>UniRef50_Q4RMW5 Cluster: Chromosome 3 SCAF15018, whole genome
shotgun sequence; n=1; Tetraodon nigroviridis|Rep:
Chromosome 3 SCAF15018, whole genome shotgun sequence -
Tetraodon nigroviridis (Green puffer)
Length = 1056
Score = 33.1 bits (72), Expect = 9.2
Identities = 34/105 (32%), Positives = 52/105 (49%), Gaps = 1/105 (0%)
Frame = -1
Query: 359 QDVYAQHTQVRAIRKKMCEIITRDV-TNSELREVVNS*FLTPLPRTSRRPAMASTLCAMF 183
Q+V TQ + + + TR + + SE+R N FLT + R+S R AST C++
Sbjct: 179 QEVAPSPTQAPEGARMVDVVSTRTMPSESEVRVARN--FLTKILRSSMRYQSASTPCSLV 236
Query: 182 ASER*KC*RGPVSRSRS*WNFTAKAVEARGKPETSLNGRRATSLP 48
PVSR S W +++K E +PE++ G AT+ P
Sbjct: 237 VFSERPWKNDPVSRPHS-W-YSSKLTEE--EPESAKRG--ATAAP 275
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 826,808,518
Number of Sequences: 1657284
Number of extensions: 16371695
Number of successful extensions: 42751
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 41133
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 42722
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 75833093035
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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