Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= psV30431.Seq
         (917 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI0000498E21 Cluster: myotubularin-related protein; n=...    37   0.63 
UniRef50_Q75H62 Cluster: Putative uncharacterized protein OSJNBb...    35   3.3  

>UniRef50_UPI0000498E21 Cluster: myotubularin-related protein; n=1;
            Entamoeba histolytica HM-1:IMSS|Rep: myotubularin-related
            protein - Entamoeba histolytica HM-1:IMSS
          Length = 920

 Score = 37.1 bits (82), Expect = 0.63
 Identities = 25/76 (32%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
 Frame = -2

Query: 526  FLRAIDSVTSMFSVSSKGFS-REVLLSELSKSVFIFAGFSFTFSEWLESDS*TSALGKLF 350
            FL+ IDSV  ++S+    F   EV L EL   ++     +F F+ W E +S  + +   +
Sbjct: 809  FLQFIDSVYQLYSLFPSEFEFNEVFLKELLFQLYSCYFCNFRFNCWNEFNSFGNRVMNFY 868

Query: 349  SVTTYEVLLLFDSINE 302
            S   YE  +LF   NE
Sbjct: 869  SFLDYEEEILFSFSNE 884


>UniRef50_Q75H62 Cluster: Putative uncharacterized protein
           OSJNBb0007E22.26; n=2; Oryza sativa (japonica
           cultivar-group)|Rep: Putative uncharacterized protein
           OSJNBb0007E22.26 - Oryza sativa subsp. japonica (Rice)
          Length = 165

 Score = 34.7 bits (76), Expect = 3.3
 Identities = 26/82 (31%), Positives = 42/82 (51%), Gaps = 7/82 (8%)
 Frame = -3

Query: 741 NLGPHSEIGGTL-VETYRNMXLLGICTSP*SSETLKPVT------LAITMFSQMAFATGT 583
           NL PH ++  +  ++ +R M LLG CT   +S TL P +      L  T F      TG 
Sbjct: 6   NLLPHWDLANSYQMQAHREMKLLGCCT---NSGTLSPSSKNLHGFLYSTGFEAKILQTG- 61

Query: 582 FLSFIVKSMTSIWTTVSLISSV 517
            +SF++ ++   WT +S I ++
Sbjct: 62  MVSFLLSNLNDGWTGMSFIDTL 83


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 768,518,937
Number of Sequences: 1657284
Number of extensions: 13301720
Number of successful extensions: 33496
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 32236
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33465
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 84031265255
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)