Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= psV30431.Seq
         (917 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles ...    25   2.4  
AY347946-1|AAR28374.1|  640|Anopheles gambiae putative NPY GPCR ...    24   5.6  
AY578805-1|AAT07310.1|  753|Anopheles gambiae medea protein.           24   7.4  
AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcript...    24   7.4  

>M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles
           gambiae T1 retroposon. ).
          Length = 975

 Score = 25.4 bits (53), Expect = 2.4
 Identities = 11/35 (31%), Positives = 19/35 (54%), Gaps = 2/35 (5%)
 Frame = +3

Query: 627 MSRALVSLMTMEMCIYPTRXYSC--MFQPKYRLFL 725
           +++   +  T E+CI+PT  +SC     PK   F+
Sbjct: 549 ITQTCATAKTFELCIFPTILHSCSSAISPKQHGFM 583


>AY347946-1|AAR28374.1|  640|Anopheles gambiae putative NPY GPCR
           protein.
          Length = 640

 Score = 24.2 bits (50), Expect = 5.6
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = -1

Query: 917 NPPKSSWSRDIXFWDSHED 861
           N PKS+++  I FWD   D
Sbjct: 395 NSPKSAFTGRIEFWDGGRD 413


>AY578805-1|AAT07310.1|  753|Anopheles gambiae medea protein.
          Length = 753

 Score = 23.8 bits (49), Expect = 7.4
 Identities = 7/9 (77%), Positives = 7/9 (77%)
 Frame = -1

Query: 683 PCWVYAHLH 657
           PCWV  HLH
Sbjct: 723 PCWVEVHLH 731


>AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1222

 Score = 23.8 bits (49), Expect = 7.4
 Identities = 8/24 (33%), Positives = 14/24 (58%)
 Frame = -2

Query: 589 WHIFIIYSQINDIYLDYGLTDFLR 518
           W I  IYS  N +Y+ + + + L+
Sbjct: 192 WRIISIYSYSNHVYIRFAVGELLQ 215


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 802,086
Number of Sequences: 2352
Number of extensions: 13791
Number of successful extensions: 18
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 99641691
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)