Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= psV30431.Seq
         (917 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U41016-1|AAA82318.1|  203|Caenorhabditis elegans Glutathione s-t...    29   3.5  
Z50176-2|CAA90539.1| 1115|Caenorhabditis elegans Hypothetical pr...    29   4.7  
U41992-7|AAA83358.1|  374|Caenorhabditis elegans Hypothetical pr...    29   6.2  
Z66522-4|CAC70090.1|  349|Caenorhabditis elegans Hypothetical pr...    28   8.1  

>U41016-1|AAA82318.1|  203|Caenorhabditis elegans Glutathione
           s-transferase protein11 protein.
          Length = 203

 Score = 29.5 bits (63), Expect = 3.5
 Identities = 15/58 (25%), Positives = 30/58 (51%)
 Frame = +2

Query: 545 QIDVIDLTINDKNVPVANAICENIVMANVTGFSVSDDYGDVHIPNKXIFLYVSTKVPP 718
           ++++    I    +P  +A  ENI++ N TG+ V D      +    IF ++++K+ P
Sbjct: 113 KVEIFKKLIESTIIPFISAF-ENILVTNGTGYFVGDKISYADLAIFHIFWFMNSKILP 169


>Z50176-2|CAA90539.1| 1115|Caenorhabditis elegans Hypothetical
           protein C09G1.2 protein.
          Length = 1115

 Score = 29.1 bits (62), Expect = 4.7
 Identities = 14/58 (24%), Positives = 25/58 (43%)
 Frame = +3

Query: 252 NNAVIQKADVYDSDSNHSLIESNKSKTSYVVTEKSLPNADVYESDSSHSENVKEKPAK 425
           NN+  +K D+  +    SL   +  +  +  TEKS P  D+ ++           PA+
Sbjct: 349 NNSDAEKEDIKGTRKRSSLENQHSERMQFSQTEKSSPIGDMVQNSPDFKNMANRTPAE 406


>U41992-7|AAA83358.1|  374|Caenorhabditis elegans Hypothetical
           protein F32E10.6 protein.
          Length = 374

 Score = 28.7 bits (61), Expect = 6.2
 Identities = 16/38 (42%), Positives = 19/38 (50%)
 Frame = +3

Query: 312 ESNKSKTSYVVTEKSLPNADVYESDSSHSENVKEKPAK 425
           +SNK K S    +KS  + D   SD    E VKEK  K
Sbjct: 178 KSNKKKGSKKSPKKSAKSKDDDSSDEEEEEEVKEKSPK 215


>Z66522-4|CAC70090.1|  349|Caenorhabditis elegans Hypothetical
           protein F14E5.6 protein.
          Length = 349

 Score = 28.3 bits (60), Expect = 8.1
 Identities = 15/27 (55%), Positives = 17/27 (62%), Gaps = 2/27 (7%)
 Frame = +2

Query: 542 VQIDVIDLTIND--KNVPVANAICENI 616
           + ID  D  IND   NVPV + ICENI
Sbjct: 253 ISIDDSDKYINDYKNNVPVPDFICENI 279


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,915,103
Number of Sequences: 27780
Number of extensions: 327080
Number of successful extensions: 752
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 726
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 752
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2349764032
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)