Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= psV30430.Seq
(846 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P25705 Cluster: ATP synthase subunit alpha, mitochondri... 164 2e-39
UniRef50_P35381 Cluster: ATP synthase subunit alpha, mitochondri... 163 4e-39
UniRef50_Q29596 Cluster: ATP synthase subunit alpha liver isofor... 150 4e-35
UniRef50_Q35058 Cluster: AtpA intron2 ORF; n=8; Embryophyta|Rep:... 136 9e-31
UniRef50_A0D564 Cluster: ATP synthase subunit alpha; n=1; Parame... 131 2e-29
UniRef50_Q5FRC7 Cluster: ATP synthase subunit alpha 1; n=100; ce... 119 1e-25
UniRef50_Q9XXK1-2 Cluster: Isoform b of Q9XXK1 ; n=1; Caenorhabd... 107 3e-22
UniRef50_A3FPS2 Cluster: ATP synthase subunit alpha; n=2; Crypto... 100 9e-20
UniRef50_Q9PR12 Cluster: ATP synthase subunit alpha; n=1037; cel... 97 4e-19
UniRef50_O50140 Cluster: ATP synthase subunit alpha; n=2; Firmic... 97 6e-19
UniRef50_UPI0000EB1FE1 Cluster: UPI0000EB1FE1 related cluster; n... 95 3e-18
UniRef50_P45825 Cluster: ATP synthase subunit alpha; n=47; Bacte... 94 3e-18
UniRef50_Q6A8C5 Cluster: ATP synthase subunit alpha; n=2; Bacter... 88 3e-16
UniRef50_A3JAC3 Cluster: F0F1 ATP synthase subunit alpha; n=3; P... 87 5e-16
UniRef50_Q0SGP7 Cluster: ATP synthase subunit alpha; n=17; cellu... 85 2e-15
UniRef50_UPI00005A408F Cluster: PREDICTED: similar to ATP syntha... 83 6e-15
UniRef50_A6PZL5 Cluster: ATP synthase subunit alpha; n=4; Leucon... 81 3e-14
UniRef50_Q21Z99 Cluster: ATP synthase subunit alpha 2; n=22; cel... 73 7e-12
UniRef50_Q62EB0 Cluster: ATP synthase subunit alpha 2; n=25; Pro... 70 6e-11
UniRef50_Q9AHX2 Cluster: ATP synthase alpha subunit; n=10; Candi... 64 6e-09
UniRef50_Q1PVR1 Cluster: Strongly similar to ATPA gene encoding ... 64 6e-09
UniRef50_A0NUS5 Cluster: Putative uncharacterized protein; n=1; ... 62 2e-08
UniRef50_Q603U2 Cluster: ATP synthase subunit alpha 2; n=6; Prot... 58 2e-07
UniRef50_A0VM48 Cluster: Putative uncharacterized protein; n=3; ... 56 8e-07
UniRef50_Q9TAH9 Cluster: ATP synthase subunit alpha; n=1; Cafete... 54 3e-06
UniRef50_A7DHD0 Cluster: Putative uncharacterized protein; n=2; ... 52 2e-05
UniRef50_Q9G8S6 Cluster: ATP synthase F1 subunit alpha; n=1; Nae... 51 3e-05
UniRef50_Q8R9Z1 Cluster: Flagellar biosynthesis/type III secreto... 50 6e-05
UniRef50_Q2F981 Cluster: Ribosomal protein S2; n=3; Oryza sativa... 50 6e-05
UniRef50_Q92FH0 Cluster: ATP synthase subunit alpha 1; n=13; Lis... 48 3e-04
UniRef50_A1FHL5 Cluster: Putative uncharacterized protein; n=3; ... 47 7e-04
UniRef50_A7CYE2 Cluster: Flagellar protein export ATPase FliI; n... 46 0.001
UniRef50_Q7UIJ0 Cluster: Flagellum-specific ATP synthase; n=3; P... 44 0.005
UniRef50_A3IIS5 Cluster: Putative uncharacterized protein; n=1; ... 44 0.006
UniRef50_Q67K17 Cluster: Flagellar-specific ATP synthase; n=1; S... 42 0.019
UniRef50_Q9BBC2 Cluster: ATPase CF1 alpha subunit; n=4; Dinophyc... 40 0.059
UniRef50_Q4QJF1 Cluster: ATPase alpha subunit; n=9; Trypanosomat... 40 0.059
UniRef50_P00830 Cluster: ATP synthase subunit beta, mitochondria... 40 0.079
UniRef50_Q92LK8 Cluster: ATP synthase subunit beta; n=32; cellul... 40 0.10
UniRef50_P06576 Cluster: ATP synthase subunit beta, mitochondria... 40 0.10
UniRef50_A7R4X8 Cluster: Chromosome undetermined scaffold_808, w... 39 0.14
UniRef50_Q6KHZ3 Cluster: ATP synthase alpha chain; n=1; Mycoplas... 38 0.32
UniRef50_A4M4Z8 Cluster: Putative uncharacterized protein; n=1; ... 38 0.32
UniRef50_Q5FRC5 Cluster: ATP synthase subunit beta; n=266; cellu... 38 0.32
UniRef50_Q9C5A9 Cluster: ATP synthase subunit beta-3, mitochondr... 38 0.32
UniRef50_Q5NQY9 Cluster: ATP synthase subunit beta; n=169; cellu... 38 0.42
UniRef50_A5D0F3 Cluster: Flagellar biosynthesis/type III secreto... 37 0.55
UniRef50_Q55738 Cluster: DNA gyrase subunit A; n=37; Cyanobacter... 37 0.55
UniRef50_UPI00004D9CFE Cluster: FH1/FH2 domain-containing protei... 37 0.73
UniRef50_Q9PLK9 Cluster: Virulence ATPase, putative; n=9; Chlamy... 37 0.73
UniRef50_Q74G36 Cluster: Flagellum-specific ATP synthase FliI; n... 36 0.97
UniRef50_Q1IR49 Cluster: ATPase FliI/YscN; n=1; Acidobacteria ba... 36 0.97
UniRef50_A5KSP4 Cluster: Sodium-transporting two-sector ATPase; ... 36 0.97
UniRef50_Q8FXF0 Cluster: Flagellum-specific ATP synthase FliI; n... 36 1.7
UniRef50_A5C604 Cluster: Putative uncharacterized protein; n=1; ... 36 1.7
UniRef50_A4QBV3 Cluster: Putative uncharacterized protein; n=1; ... 35 2.2
UniRef50_Q5KH32 Cluster: Putative uncharacterized protein; n=2; ... 35 2.2
UniRef50_UPI00006C0889 Cluster: PREDICTED: hypothetical protein;... 35 3.0
UniRef50_Q93UD9 Cluster: ATP synthase beta subunit; n=12; Candid... 34 3.9
UniRef50_P55717 Cluster: Probable ATP synthase y4yI; n=27; Bacte... 34 3.9
UniRef50_O83417 Cluster: Flagellum-specific ATP synthase; n=42; ... 34 3.9
UniRef50_UPI0000DB7ADE Cluster: PREDICTED: similar to RhoGAP93B ... 34 5.2
UniRef50_Q60DN8 Cluster: Putative uncharacterized protein OSJNBa... 34 5.2
UniRef50_UPI00005F655A Cluster: COG1157: Flagellar biosynthesis/... 33 6.8
UniRef50_Q15V30 Cluster: Putative uncharacterized protein; n=1; ... 33 6.8
UniRef50_A3L181 Cluster: ATP synthase beta chain; n=3; Gammaprot... 33 6.8
UniRef50_P38168 Cluster: Putative uncharacterized protein YBL100... 33 6.8
UniRef50_Q98NT5 Cluster: Mlr9748 protein; n=18; Alphaproteobacte... 33 9.0
UniRef50_A7QAH4 Cluster: Chromosome undetermined scaffold_71, wh... 33 9.0
UniRef50_O94034 Cluster: Nucleotide phosphodiesterase; n=4; Sacc... 33 9.0
UniRef50_Q98QB7 Cluster: ATP synthase subunit alpha 2; n=1; Myco... 33 9.0
>UniRef50_P25705 Cluster: ATP synthase subunit alpha, mitochondrial
precursor; n=489; cellular organisms|Rep: ATP synthase
subunit alpha, mitochondrial precursor - Homo sapiens
(Human)
Length = 553
Score = 164 bits (399), Expect = 2e-39
Identities = 78/85 (91%), Positives = 85/85 (100%)
Frame = +3
Query: 255 LEETGRVLSIGDGIARVYGLKNIQAEEMVEFSSGLKGMALNLEPDNVGVVVFGNDKLIKE 434
LEETGRVLSIGDGIARV+GL+N+QAEEMVEFSSGLKGM+LNLEPDNVGVVVFGNDKLIKE
Sbjct: 68 LEETGRVLSIGDGIARVHGLRNVQAEEMVEFSSGLKGMSLNLEPDNVGVVVFGNDKLIKE 127
Query: 435 GDIVKRTGAIVDVPVGEQILGRVVE 509
GDIVKRTGAIVDVPVGE++LGRVV+
Sbjct: 128 GDIVKRTGAIVDVPVGEELLGRVVD 152
Score = 97.9 bits (233), Expect = 3e-19
Identities = 49/65 (75%), Positives = 53/65 (81%)
Frame = +2
Query: 509 ALGNPIDGKGPIDTKSRMRVGIKAPGIIPRVSVREPMQNGIKAVDSLVPIGPWSSVN*FI 688
ALGN IDGKGPI +K+R RVG+KAPGIIPR+SVREPMQ GIKAVDSLVPIG I
Sbjct: 153 ALGNAIDGKGPIGSKTRRRVGLKAPGIIPRISVREPMQTGIKAVDSLVPIGR-GQRELII 211
Query: 689 GDRQT 703
GDRQT
Sbjct: 212 GDRQT 216
Score = 48.8 bits (111), Expect = 2e-04
Identities = 28/67 (41%), Positives = 36/67 (53%), Gaps = 4/67 (5%)
Frame = +1
Query: 67 LISARIAGSVARRLPNAATQVSKXXXXXXXXXSRKLHVSTTH----KAAEISTILEERIL 234
++S R+A +V R LP A VS+ +R H S TH AE+S+ILEERIL
Sbjct: 1 MLSVRVAAAVVRALPRRAGLVSRNALGSSFIAARNFHASNTHLQKTGTAEMSSILEERIL 60
Query: 235 GAAPKAD 255
GA D
Sbjct: 61 GADTSVD 67
>UniRef50_P35381 Cluster: ATP synthase subunit alpha, mitochondrial
precursor; n=847; cellular organisms|Rep: ATP synthase
subunit alpha, mitochondrial precursor - Drosophila
melanogaster (Fruit fly)
Length = 552
Score = 163 bits (397), Expect = 4e-39
Identities = 78/85 (91%), Positives = 84/85 (98%)
Frame = +3
Query: 255 LEETGRVLSIGDGIARVYGLKNIQAEEMVEFSSGLKGMALNLEPDNVGVVVFGNDKLIKE 434
LEETGRVLSIGDGIARVYGL NIQA+EMVEFSSGLKGMALNLEPDNVGVVVFGNDKLIK+
Sbjct: 67 LEETGRVLSIGDGIARVYGLNNIQADEMVEFSSGLKGMALNLEPDNVGVVVFGNDKLIKQ 126
Query: 435 GDIVKRTGAIVDVPVGEQILGRVVE 509
GDIVKRTGAIVDVPVG+++LGRVV+
Sbjct: 127 GDIVKRTGAIVDVPVGDELLGRVVD 151
Score = 98.3 bits (234), Expect = 2e-19
Identities = 51/65 (78%), Positives = 52/65 (80%)
Frame = +2
Query: 509 ALGNPIDGKGPIDTKSRMRVGIKAPGIIPRVSVREPMQNGIKAVDSLVPIGPWSSVN*FI 688
ALGN IDGKG I+TK R RVGIKAPGIIPRVSVREPMQ GIKAVDSLVPIG I
Sbjct: 152 ALGNAIDGKGAINTKDRFRVGIKAPGIIPRVSVREPMQTGIKAVDSLVPIGR-GQRELII 210
Query: 689 GDRQT 703
GDRQT
Sbjct: 211 GDRQT 215
Score = 75.8 bits (178), Expect = 1e-12
Identities = 40/66 (60%), Positives = 48/66 (72%), Gaps = 1/66 (1%)
Frame = +1
Query: 61 MSLISARIAGSVARRLPNAATQVS-KXXXXXXXXXSRKLHVSTTHKAAEISTILEERILG 237
MS+ SAR+A SVAR LP AA QV+ K +RKLHV++T ++AEIS ILEERILG
Sbjct: 1 MSIFSARLASSVARNLPKAANQVACKAAYPAASLAARKLHVASTQRSAEISNILEERILG 60
Query: 238 AAPKAD 255
APKAD
Sbjct: 61 VAPKAD 66
>UniRef50_Q29596 Cluster: ATP synthase subunit alpha liver isoform,
mitochondrial precursor; n=20; cellular organisms|Rep:
ATP synthase subunit alpha liver isoform, mitochondrial
precursor - Sus scrofa (Pig)
Length = 148
Score = 150 bits (364), Expect = 4e-35
Identities = 72/81 (88%), Positives = 77/81 (95%)
Frame = +3
Query: 255 LEETGRVLSIGDGIARVYGLKNIQAEEMVEFSSGLKGMALNLEPDNVGVVVFGNDKLIKE 434
LEETGRVLSIGDGIARV+G +N QAEEMVEFSSGLKGM+LNLEPDNVGVVVFGNDKLIKE
Sbjct: 68 LEETGRVLSIGDGIARVHGXRNXQAEEMVEFSSGLKGMSLNLEPDNVGVVVFGNDKLIKE 127
Query: 435 GDIVKRTGAIVDVPVGEQILG 497
GDIVKRTG IVDVPVG+ +LG
Sbjct: 128 GDIVKRTGXIVDVPVGKDLLG 148
Score = 46.4 bits (105), Expect = 0.001
Identities = 28/67 (41%), Positives = 35/67 (52%), Gaps = 4/67 (5%)
Frame = +1
Query: 67 LISARIAGSVARRLPNAATQVSKXXXXXXXXXSRKLHVSTTH----KAAEISTILEERIL 234
++S R+A +VAR LP A VSK + LH S T AE+S+ILE RIL
Sbjct: 1 MLSVRVAAAVARXLPRRAGXVSKNALGSSFVAAXNLHASNTRLQKTGTAEVSSILEXRIL 60
Query: 235 GAAPKAD 255
GA D
Sbjct: 61 GADTSVD 67
>UniRef50_Q35058 Cluster: AtpA intron2 ORF; n=8; Embryophyta|Rep:
AtpA intron2 ORF - Marchantia polymorpha (Liverwort)
Length = 1259
Score = 136 bits (328), Expect = 9e-31
Identities = 63/85 (74%), Positives = 77/85 (90%)
Frame = +3
Query: 255 LEETGRVLSIGDGIARVYGLKNIQAEEMVEFSSGLKGMALNLEPDNVGVVVFGNDKLIKE 434
++E GRV+S+GDGIARVYGL IQA EMVEF+SG+KGMALNLE +NVG+V+FG+D IKE
Sbjct: 26 VDEIGRVVSVGDGIARVYGLNKIQAGEMVEFASGVKGMALNLENENVGIVIFGSDTAIKE 85
Query: 435 GDIVKRTGAIVDVPVGEQILGRVVE 509
GDIVKRTG+IVDVPVG+ +LGRVV+
Sbjct: 86 GDIVKRTGSIVDVPVGKGMLGRVVD 110
Score = 79.4 bits (187), Expect = 1e-13
Identities = 42/65 (64%), Positives = 45/65 (69%)
Frame = +2
Query: 509 ALGNPIDGKGPIDTKSRMRVGIKAPGIIPRVSVREPMQNGIKAVDSLVPIGPWSSVN*FI 688
ALG PIDGKG + R RV +KAPGII R SV EPMQ G+KAVDSLVPIG I
Sbjct: 111 ALGVPIDGKGALSAVERRRVEVKAPGIIARKSVHEPMQTGLKAVDSLVPIGR-GQRELII 169
Query: 689 GDRQT 703
GDRQT
Sbjct: 170 GDRQT 174
>UniRef50_A0D564 Cluster: ATP synthase subunit alpha; n=1;
Paramecium tetraurelia|Rep: ATP synthase subunit alpha -
Paramecium tetraurelia
Length = 612
Score = 131 bits (317), Expect = 2e-29
Identities = 61/85 (71%), Positives = 75/85 (88%)
Frame = +3
Query: 255 LEETGRVLSIGDGIARVYGLKNIQAEEMVEFSSGLKGMALNLEPDNVGVVVFGNDKLIKE 434
++E G V+SIGDGIARV+GL +QA EMVEFSSG++GMALNLE DNVG+VV GND+ I+E
Sbjct: 48 IKEYGTVISIGDGIARVFGLTQVQAGEMVEFSSGVRGMALNLETDNVGIVVLGNDREIQE 107
Query: 435 GDIVKRTGAIVDVPVGEQILGRVVE 509
GDIVKRTGAIVDVP+G ++LGRV +
Sbjct: 108 GDIVKRTGAIVDVPIGMEMLGRVFD 132
Score = 87.8 bits (208), Expect = 3e-16
Identities = 44/65 (67%), Positives = 48/65 (73%)
Frame = +2
Query: 509 ALGNPIDGKGPIDTKSRMRVGIKAPGIIPRVSVREPMQNGIKAVDSLVPIGPWSSVN*FI 688
ALGNPIDG GP+ T +R RV +KAPGIIPR SV EPMQ G+KAVD LVPIG I
Sbjct: 133 ALGNPIDGHGPVKTNTRRRVELKAPGIIPRKSVHEPMQTGLKAVDCLVPIGR-GQRELII 191
Query: 689 GDRQT 703
GDRQT
Sbjct: 192 GDRQT 196
>UniRef50_Q5FRC7 Cluster: ATP synthase subunit alpha 1; n=100;
cellular organisms|Rep: ATP synthase subunit alpha 1 -
Gluconobacter oxydans (Gluconobacter suboxydans)
Length = 511
Score = 119 bits (286), Expect = 1e-25
Identities = 59/86 (68%), Positives = 71/86 (82%), Gaps = 1/86 (1%)
Frame = +3
Query: 255 LEETGRVLSIGDGIARVYGLKNIQAEEMVEFS-SGLKGMALNLEPDNVGVVVFGNDKLIK 431
+ ETG VLSIGDGIARVYGL N+ A EMVEF +GLKGMALNLE DNVGVV+FG+ I+
Sbjct: 25 VSETGTVLSIGDGIARVYGLTNVMAGEMVEFEGTGLKGMALNLEADNVGVVLFGDGDSIR 84
Query: 432 EGDIVKRTGAIVDVPVGEQILGRVVE 509
EGD V RT ++V+VPVG+ +LGRVV+
Sbjct: 85 EGDTVLRTKSVVEVPVGKGLLGRVVD 110
Score = 79.0 bits (186), Expect = 1e-13
Identities = 39/64 (60%), Positives = 45/64 (70%)
Frame = +2
Query: 512 LGNPIDGKGPIDTKSRMRVGIKAPGIIPRVSVREPMQNGIKAVDSLVPIGPWSSVN*FIG 691
LGNPIDG+GP+ R +KAPGI+PR SV EPMQ GIKA+D+LVPIG IG
Sbjct: 112 LGNPIDGRGPLTDVEYRRAEVKAPGIMPRQSVSEPMQTGIKAIDALVPIGR-GQRELIIG 170
Query: 692 DRQT 703
DRQT
Sbjct: 171 DRQT 174
>UniRef50_Q9XXK1-2 Cluster: Isoform b of Q9XXK1 ; n=1;
Caenorhabditis elegans|Rep: Isoform b of Q9XXK1 -
Caenorhabditis elegans
Length = 146
Score = 107 bits (258), Expect = 3e-22
Identities = 50/57 (87%), Positives = 55/57 (96%)
Frame = +3
Query: 255 LEETGRVLSIGDGIARVYGLKNIQAEEMVEFSSGLKGMALNLEPDNVGVVVFGNDKL 425
LEETG+VLSIGDGIARVYGLKNIQAEEMVEF SG+KGMA+NL+ DNVGVVVFGNDK+
Sbjct: 53 LEETGKVLSIGDGIARVYGLKNIQAEEMVEFDSGIKGMAMNLDVDNVGVVVFGNDKI 109
>UniRef50_A3FPS2 Cluster: ATP synthase subunit alpha; n=2;
Cryptosporidium|Rep: ATP synthase subunit alpha -
Cryptosporidium parvum Iowa II
Length = 639
Score = 99.5 bits (237), Expect = 9e-20
Identities = 45/81 (55%), Positives = 66/81 (81%)
Frame = +3
Query: 267 GRVLSIGDGIARVYGLKNIQAEEMVEFSSGLKGMALNLEPDNVGVVVFGNDKLIKEGDIV 446
G+V+S+ DGIA+V G+++++ E+VEFSSG KGMALNLE D+VG+V+ G D+ I++GD V
Sbjct: 151 GQVISVADGIAQVDGIRSVKYGELVEFSSGEKGMALNLENDHVGIVILGEDRNIRKGDQV 210
Query: 447 KRTGAIVDVPVGEQILGRVVE 509
T IV+ PVG+++LGRVV+
Sbjct: 211 ISTNTIVNCPVGKELLGRVVD 231
Score = 62.5 bits (145), Expect = 1e-08
Identities = 31/65 (47%), Positives = 41/65 (63%)
Frame = +2
Query: 509 ALGNPIDGKGPIDTKSRMRVGIKAPGIIPRVSVREPMQNGIKAVDSLVPIGPWSSVN*FI 688
ALGNPIDGK I + + + +KAPGI+ R + E + GIK +DSL+PIG +
Sbjct: 232 ALGNPIDGKPSIISLEKREIDVKAPGIMDRKPINEQLITGIKFIDSLIPIG-LGQREAIV 290
Query: 689 GDRQT 703
GDRQT
Sbjct: 291 GDRQT 295
>UniRef50_Q9PR12 Cluster: ATP synthase subunit alpha; n=1037;
cellular organisms|Rep: ATP synthase subunit alpha -
Ureaplasma parvum (Ureaplasma urealyticum biotype 1)
Length = 799
Score = 97.5 bits (232), Expect = 4e-19
Identities = 48/83 (57%), Positives = 61/83 (73%)
Frame = +3
Query: 261 ETGRVLSIGDGIARVYGLKNIQAEEMVEFSSGLKGMALNLEPDNVGVVVFGNDKLIKEGD 440
E G V+S+GDGI V GL N+ E+V F +G++GMALNLE D VGVV+ G+ IKEGD
Sbjct: 28 EVGNVISLGDGIVLVDGLDNVMLNEIVRFENGVEGMALNLEEDAVGVVLLGDYSNIKEGD 87
Query: 441 IVKRTGAIVDVPVGEQILGRVVE 509
V RT IV+VPVG+ +LGRVV+
Sbjct: 88 RVYRTKRIVEVPVGDVMLGRVVD 110
Score = 49.6 bits (113), Expect = 1e-04
Identities = 26/65 (40%), Positives = 37/65 (56%)
Frame = +2
Query: 509 ALGNPIDGKGPIDTKSRMRVGIKAPGIIPRVSVREPMQNGIKAVDSLVPIGPWSSVN*FI 688
ALG +D KG I + APG++ R SV +P++ GI ++D++ PIG I
Sbjct: 111 ALGKAVDNKGNIVANKFSVIEKIAPGVMDRKSVHQPLETGILSIDAMFPIGK-GQRELII 169
Query: 689 GDRQT 703
GDRQT
Sbjct: 170 GDRQT 174
>UniRef50_O50140 Cluster: ATP synthase subunit alpha; n=2;
Firmicutes|Rep: ATP synthase subunit alpha -
Ruminococcus albus
Length = 523
Score = 96.7 bits (230), Expect = 6e-19
Identities = 46/84 (54%), Positives = 62/84 (73%)
Frame = +3
Query: 255 LEETGRVLSIGDGIARVYGLKNIQAEEMVEFSSGLKGMALNLEPDNVGVVVFGNDKLIKE 434
L++ G V ++GDGI+RV GL+ + E++EF +G GMA+NLE D VG V+ G ++ I+E
Sbjct: 25 LDDVGTVCTVGDGISRVNGLEKCMSGELLEFENGTYGMAMNLEQDFVGCVLLGTEEGIRE 84
Query: 435 GDIVKRTGAIVDVPVGEQILGRVV 506
G VKRTG IV VPVGE +LGRVV
Sbjct: 85 GSNVKRTGRIVSVPVGEAMLGRVV 108
Score = 63.3 bits (147), Expect = 7e-09
Identities = 35/65 (53%), Positives = 40/65 (61%)
Frame = +2
Query: 509 ALGNPIDGKGPIDTKSRMRVGIKAPGIIPRVSVREPMQNGIKAVDSLVPIGPWSSVN*FI 688
ALG PIDGKG I T V A GII R SV P+Q GIKA+DS++P+G I
Sbjct: 110 ALGAPIDGKGAILTNETRPVESPAFGIITRKSVNRPLQTGIKAIDSMIPVGR-GQRELII 168
Query: 689 GDRQT 703
GDRQT
Sbjct: 169 GDRQT 173
>UniRef50_UPI0000EB1FE1 Cluster: UPI0000EB1FE1 related cluster; n=1;
Canis lupus familiaris|Rep: UPI0000EB1FE1 UniRef100
entry - Canis familiaris
Length = 383
Score = 94.7 bits (225), Expect = 3e-18
Identities = 54/84 (64%), Positives = 63/84 (75%)
Frame = +3
Query: 255 LEETGRVLSIGDGIARVYGLKNIQAEEMVEFSSGLKGMALNLEPDNVGVVVFGNDKLIKE 434
LE+TG VLS GDGI R+ GL+N QAEEMV FSS LK M LNLE D +VV + KE
Sbjct: 68 LEDTGCVLSFGDGIVRISGLRNAQAEEMVGFSS-LKCMCLNLEADM--LVVLHLEMNTKE 124
Query: 435 GDIVKRTGAIVDVPVGEQILGRVV 506
GD VKRTGAI+DV VG+++LGRVV
Sbjct: 125 GDTVKRTGAIMDVLVGKKLLGRVV 148
Score = 52.0 bits (119), Expect = 2e-05
Identities = 27/53 (50%), Positives = 35/53 (66%)
Frame = +2
Query: 506 RALGNPIDGKGPIDTKSRMRVGIKAPGIIPRVSVREPMQNGIKAVDSLVPIGP 664
+ LG + G D+K +VG+K I +SV+EPM+ GIKAVDSLVPIGP
Sbjct: 142 KLLGRVVGAIG--DSKDHRQVGLKVLRITLPISVQEPMETGIKAVDSLVPIGP 192
>UniRef50_P45825 Cluster: ATP synthase subunit alpha; n=47;
Bacteria|Rep: ATP synthase subunit alpha - Mycobacterium
leprae
Length = 558
Score = 94.3 bits (224), Expect = 3e-18
Identities = 43/83 (51%), Positives = 59/83 (71%)
Frame = +3
Query: 258 EETGRVLSIGDGIARVYGLKNIQAEEMVEFSSGLKGMALNLEPDNVGVVVFGNDKLIKEG 437
EE G V+ +GD IA V GL ++ +E++EF G+ G+ALNL+ NVG V+ G+ + IKEG
Sbjct: 29 EEVGTVVDVGDSIAHVEGLPSVMTQELLEFPGGILGVALNLDEHNVGAVILGDFENIKEG 88
Query: 438 DIVKRTGAIVDVPVGEQILGRVV 506
VKRTG ++ VPVGE +GRVV
Sbjct: 89 QKVKRTGDVLSVPVGEAFMGRVV 111
Score = 66.5 bits (155), Expect = 8e-10
Identities = 30/64 (46%), Positives = 45/64 (70%)
Frame = +2
Query: 512 LGNPIDGKGPIDTKSRMRVGIKAPGIIPRVSVREPMQNGIKAVDSLVPIGPWSSVN*FIG 691
LG PIDG+G I+ ++R + ++AP ++ R SV+EP+Q GIKA+D++ PIG IG
Sbjct: 114 LGQPIDGRGDIEAEARRALELQAPSVVQRQSVKEPLQTGIKAIDAMTPIGR-GQRQLVIG 172
Query: 692 DRQT 703
DR+T
Sbjct: 173 DRKT 176
>UniRef50_Q6A8C5 Cluster: ATP synthase subunit alpha; n=2;
Bacteria|Rep: ATP synthase subunit alpha -
Propionibacterium acnes
Length = 545
Score = 87.8 bits (208), Expect = 3e-16
Identities = 43/84 (51%), Positives = 56/84 (66%)
Frame = +3
Query: 258 EETGRVLSIGDGIARVYGLKNIQAEEMVEFSSGLKGMALNLEPDNVGVVVFGNDKLIKEG 437
EE G V++ GDGIA V GL + A E++ F +G G+ALNLE +GVVV G+ I EG
Sbjct: 30 EEVGTVVTSGDGIAHVEGLPSAMANELLRFENGTMGIALNLEERQIGVVVLGDSDGIDEG 89
Query: 438 DIVKRTGAIVDVPVGEQILGRVVE 509
V+ TG ++ VPVGE LGRVV+
Sbjct: 90 STVRGTGEVLSVPVGEGYLGRVVD 113
Score = 62.5 bits (145), Expect = 1e-08
Identities = 31/66 (46%), Positives = 44/66 (66%), Gaps = 1/66 (1%)
Frame = +2
Query: 509 ALGNPIDGKGPID-TKSRMRVGIKAPGIIPRVSVREPMQNGIKAVDSLVPIGPWSSVN*F 685
A+GNP+DG G I + R + I+A G++ R VREP+Q G+KA+DS++PIG
Sbjct: 114 AMGNPVDGLGEIKGVEGRRALEIQAAGVMDRQEVREPLQTGLKAIDSMIPIGR-GQRQLI 172
Query: 686 IGDRQT 703
IGDR+T
Sbjct: 173 IGDRKT 178
>UniRef50_A3JAC3 Cluster: F0F1 ATP synthase subunit alpha; n=3;
Proteobacteria|Rep: F0F1 ATP synthase subunit alpha -
Marinobacter sp. ELB17
Length = 549
Score = 87.0 bits (206), Expect = 5e-16
Identities = 39/85 (45%), Positives = 61/85 (71%)
Frame = +3
Query: 255 LEETGRVLSIGDGIARVYGLKNIQAEEMVEFSSGLKGMALNLEPDNVGVVVFGNDKLIKE 434
L E GRV+ +GDG+A V GL A+E++ F+SG++G+ L+LEP +GV++ G + I+
Sbjct: 61 LTEVGRVIEVGDGVAVVTGLARALADELLIFASGVRGIVLDLEPGRLGVILLGPSEHIRL 120
Query: 435 GDIVKRTGAIVDVPVGEQILGRVVE 509
G+ V+RT ++ VPVG +LGRVV+
Sbjct: 121 GEDVRRTRKVISVPVGPALLGRVVD 145
Score = 51.6 bits (118), Expect = 2e-05
Identities = 27/65 (41%), Positives = 39/65 (60%)
Frame = +2
Query: 509 ALGNPIDGKGPIDTKSRMRVGIKAPGIIPRVSVREPMQNGIKAVDSLVPIGPWSSVN*FI 688
A+G P DG G I + V +APG++ R ++ +P+ GIKA+D+ VP+G I
Sbjct: 146 AVGLPRDGLGVIAAVAEHPVEAEAPGVLSRSAIFKPLATGIKAIDAAVPVG-LGQRELII 204
Query: 689 GDRQT 703
GDRQT
Sbjct: 205 GDRQT 209
>UniRef50_Q0SGP7 Cluster: ATP synthase subunit alpha; n=17; cellular
organisms|Rep: ATP synthase subunit alpha - Rhodococcus
sp. (strain RHA1)
Length = 547
Score = 85.4 bits (202), Expect = 2e-15
Identities = 40/83 (48%), Positives = 55/83 (66%)
Frame = +3
Query: 258 EETGRVLSIGDGIARVYGLKNIQAEEMVEFSSGLKGMALNLEPDNVGVVVFGNDKLIKEG 437
EE G V DGIA V GL + A E++EF G+ G+ALNL+ +G V+ G+ + I+EG
Sbjct: 29 EEVGLVTDTSDGIAHVSGLPSAMANELLEFPGGILGVALNLDATEIGAVILGDYENIQEG 88
Query: 438 DIVKRTGAIVDVPVGEQILGRVV 506
VKRTG ++ VPVG+ LGRV+
Sbjct: 89 QEVKRTGDVLSVPVGDAFLGRVI 111
Score = 55.6 bits (128), Expect = 1e-06
Identities = 27/64 (42%), Positives = 39/64 (60%)
Frame = +2
Query: 512 LGNPIDGKGPIDTKSRMRVGIKAPGIIPRVSVREPMQNGIKAVDSLVPIGPWSSVN*FIG 691
LG PIDG G I++ + ++A ++ R V EP+Q GIKA+D++ PIG IG
Sbjct: 114 LGQPIDGLGEIESNETRALELQAASVLERQPVEEPLQTGIKAIDAMTPIGR-GQRQLVIG 172
Query: 692 DRQT 703
DR+T
Sbjct: 173 DRKT 176
>UniRef50_UPI00005A408F Cluster: PREDICTED: similar to ATP synthase
alpha chain, mitochondrial precursor; n=1; Canis lupus
familiaris|Rep: PREDICTED: similar to ATP synthase alpha
chain, mitochondrial precursor - Canis familiaris
Length = 301
Score = 83.4 bits (197), Expect = 6e-15
Identities = 38/51 (74%), Positives = 43/51 (84%)
Frame = +2
Query: 509 ALGNPIDGKGPIDTKSRMRVGIKAPGIIPRVSVREPMQNGIKAVDSLVPIG 661
ALGN DGKGPI +K+ RVG+K PGIIP +SVREPM+ GIKAVDSLVPIG
Sbjct: 49 ALGNATDGKGPIGSKTHRRVGLKGPGIIPPISVREPMKTGIKAVDSLVPIG 99
Score = 78.6 bits (185), Expect = 2e-13
Identities = 37/48 (77%), Positives = 42/48 (87%)
Frame = +3
Query: 366 MALNLEPDNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVE 509
M+LNL PD VGVVVFGNDKLIKEGDIVKRT A VDVPVG+++ G VV+
Sbjct: 1 MSLNLGPDKVGVVVFGNDKLIKEGDIVKRTEATVDVPVGKELPGHVVD 48
>UniRef50_A6PZL5 Cluster: ATP synthase subunit alpha; n=4;
Leuconostocaceae|Rep: ATP synthase subunit alpha -
Leuconostoc durionis
Length = 297
Score = 81.4 bits (192), Expect = 3e-14
Identities = 37/71 (52%), Positives = 52/71 (73%)
Frame = +3
Query: 294 IARVYGLKNIQAEEMVEFSSGLKGMALNLEPDNVGVVVFGNDKLIKEGDIVKRTGAIVDV 473
IAR GL N + E+V F++G GM NLE VG++V G+ + I+EGD VKRTG +++V
Sbjct: 1 IARATGLANALSGELVTFNNGAYGMVQNLEESEVGIIVLGSSEGIREGDTVKRTGHVMEV 60
Query: 474 PVGEQILGRVV 506
PVGE+++GRVV
Sbjct: 61 PVGEELIGRVV 71
Score = 68.1 bits (159), Expect = 3e-10
Identities = 35/65 (53%), Positives = 43/65 (66%)
Frame = +2
Query: 509 ALGNPIDGKGPIDTKSRMRVGIKAPGIIPRVSVREPMQNGIKAVDSLVPIGPWSSVN*FI 688
ALG PIDG G ++T V KAPG++ R SV EP+Q GIKA+D+LVPIG I
Sbjct: 73 ALGQPIDGLGDLNTTKTRPVEAKAPGVMARKSVSEPLQTGIKAIDALVPIGR-GQRELII 131
Query: 689 GDRQT 703
GDR+T
Sbjct: 132 GDRKT 136
>UniRef50_Q21Z99 Cluster: ATP synthase subunit alpha 2; n=22;
cellular organisms|Rep: ATP synthase subunit alpha 2 -
Rhodoferax ferrireducens (strain DSM 15236 / ATCC
BAA-621 / T118)
Length = 534
Score = 73.3 bits (172), Expect = 7e-12
Identities = 35/83 (42%), Positives = 53/83 (63%)
Frame = +3
Query: 261 ETGRVLSIGDGIARVYGLKNIQAEEMVEFSSGLKGMALNLEPDNVGVVVFGNDKLIKEGD 440
E G + SI GIA+V GL + +E+V+F L G+A N++ +GVV+ G + GD
Sbjct: 33 EVGTITSIATGIAKVSGLPGVGFDELVKFPGDLFGIAFNVDEAEIGVVLLGEYWHLHAGD 92
Query: 441 IVKRTGAIVDVPVGEQILGRVVE 509
V RTG ++DV VG+ +LGRV++
Sbjct: 93 EVDRTGRVMDVAVGDGLLGRVID 115
Score = 55.6 bits (128), Expect = 1e-06
Identities = 25/64 (39%), Positives = 39/64 (60%)
Frame = +2
Query: 512 LGNPIDGKGPIDTKSRMRVGIKAPGIIPRVSVREPMQNGIKAVDSLVPIGPWSSVN*FIG 691
LG P+DG+GP+ + R+ + A I+ R V P+Q G+K +D+L+P+G +G
Sbjct: 117 LGRPLDGRGPVASSHRLPIERPASPIMDRAPVTVPLQTGLKVIDALIPVGR-GQRELILG 175
Query: 692 DRQT 703
DRQT
Sbjct: 176 DRQT 179
>UniRef50_Q62EB0 Cluster: ATP synthase subunit alpha 2; n=25;
Proteobacteria|Rep: ATP synthase subunit alpha 2 -
Burkholderia mallei (Pseudomonas mallei)
Length = 670
Score = 70.1 bits (164), Expect = 6e-11
Identities = 34/81 (41%), Positives = 50/81 (61%)
Frame = +3
Query: 267 GRVLSIGDGIARVYGLKNIQAEEMVEFSSGLKGMALNLEPDNVGVVVFGNDKLIKEGDIV 446
GRV + DGIA V GL++ E++ F G+ G A L+ D + VV+ D ++ V
Sbjct: 40 GRVERVADGIAFVSGLEDTMLNEVLRFEGGVTGFAHTLDEDLISVVLLDPDAGVRAQTAV 99
Query: 447 KRTGAIVDVPVGEQILGRVVE 509
RTGA+++VP G Q+LGRVV+
Sbjct: 100 ARTGAVLEVPAGPQLLGRVVD 120
Score = 47.2 bits (107), Expect = 5e-04
Identities = 26/64 (40%), Positives = 33/64 (51%)
Frame = +2
Query: 512 LGNPIDGKGPIDTKSRMRVGIKAPGIIPRVSVREPMQNGIKAVDSLVPIGPWSSVN*FIG 691
LG P+DG P+D + + AP II R V EP+ G+ VD+L IG IG
Sbjct: 122 LGRPLDGGAPLDAAHTLPIERAAPAIIERDLVSEPLDTGVLIVDALFTIGR-GQRELIIG 180
Query: 692 DRQT 703
DR T
Sbjct: 181 DRAT 184
>UniRef50_Q9AHX2 Cluster: ATP synthase alpha subunit; n=10;
Candidatus Carsonella ruddii|Rep: ATP synthase alpha
subunit - Carsonella ruddii
Length = 481
Score = 63.7 bits (148), Expect = 6e-09
Identities = 28/80 (35%), Positives = 47/80 (58%)
Frame = +3
Query: 267 GRVLSIGDGIARVYGLKNIQAEEMVEFSSGLKGMALNLEPDNVGVVVFGNDKLIKEGDIV 446
G + I D + V GLKN + EM+ FS +KG+ +L NV +++ N + +G+
Sbjct: 5 GIINKIYDSVVEVLGLKNAKYGEMILFSKNIKGIVFSLNKKNVNIIILNNYNELTQGEKC 64
Query: 447 KRTGAIVDVPVGEQILGRVV 506
T I +VPVG+Q++GR++
Sbjct: 65 YCTNKIFEVPVGKQLIGRII 84
Score = 45.6 bits (103), Expect = 0.002
Identities = 21/42 (50%), Positives = 29/42 (69%)
Frame = +2
Query: 578 APGIIPRVSVREPMQNGIKAVDSLVPIGPWSSVN*FIGDRQT 703
APG++ R +V EP+ GIK++DS++PIG IGDRQT
Sbjct: 109 APGVMDRETVNEPLLTGIKSIDSMIPIGK-GQRELIIGDRQT 149
>UniRef50_Q1PVR1 Cluster: Strongly similar to ATPA gene encoding
subunit alpha of ATP synthase; n=1; Candidatus Kuenenia
stuttgartiensis|Rep: Strongly similar to ATPA gene
encoding subunit alpha of ATP synthase - Candidatus
Kuenenia stuttgartiensis
Length = 498
Score = 63.7 bits (148), Expect = 6e-09
Identities = 31/82 (37%), Positives = 50/82 (60%)
Frame = +3
Query: 261 ETGRVLSIGDGIARVYGLKNIQAEEMVEFSSGLKGMALNLEPDNVGVVVFGNDKLIKEGD 440
E G+VLS+GDGI + GL++ + E++ F SG +G++ +L D++ VV+ I+ GD
Sbjct: 27 EEGKVLSVGDGIVHIAGLRDAKLYELILFESGDEGISFDLGVDSIAVVLLTGRNGIRAGD 86
Query: 441 IVKRTGAIVDVPVGEQILGRVV 506
+T I V E +LGRV+
Sbjct: 87 TAYKTDRIASVNATEGLLGRVL 108
Score = 40.3 bits (90), Expect = 0.059
Identities = 20/51 (39%), Positives = 28/51 (54%)
Frame = +2
Query: 509 ALGNPIDGKGPIDTKSRMRVGIKAPGIIPRVSVREPMQNGIKAVDSLVPIG 661
ALGNPID + V AP ++ R + EP+ GIK +DS++ IG
Sbjct: 110 ALGNPIDNGPELKECLSCPVERDAPSLLQRDFITEPLYTGIKVIDSMLAIG 160
>UniRef50_A0NUS5 Cluster: Putative uncharacterized protein; n=1;
Stappia aggregata IAM 12614|Rep: Putative
uncharacterized protein - Stappia aggregata IAM 12614
Length = 577
Score = 61.7 bits (143), Expect = 2e-08
Identities = 28/73 (38%), Positives = 45/73 (61%)
Frame = -2
Query: 485 LSDGNVYDSTSTLDNISFLDKLVITKYYHTHIVRFQVKGHSLEA*GELHHLLSLDVLQAI 306
L+D + +D LD ++F + V + T++V FQV+GH+L+ E H SLD++Q I
Sbjct: 305 LADWHFHDGAGPLDGVAFFNVTVGAEDNDTNVVGFQVQGHALDTTREFDHFTSLDLVQTI 364
Query: 305 NTSDTITNAQDTT 267
NT DT+T+ + T
Sbjct: 365 NTGDTVTDGEHLT 377
>UniRef50_Q603U2 Cluster: ATP synthase subunit alpha 2; n=6;
Proteobacteria|Rep: ATP synthase subunit alpha 2 -
Methylococcus capsulatus
Length = 503
Score = 58.4 bits (135), Expect = 2e-07
Identities = 29/83 (34%), Positives = 45/83 (54%)
Frame = +3
Query: 261 ETGRVLSIGDGIARVYGLKNIQAEEMVEFSSGLKGMALNLEPDNVGVVVFGNDKLIKEGD 440
E G V S+GDGIA V GL + ++++ F G + L +G V+ + + G
Sbjct: 36 EYGTVASVGDGIAWVTGLPSAAMDDVLMFEDGSWAVVFALTKKRIGAVLLHQSENLTAGT 95
Query: 441 IVKRTGAIVDVPVGEQILGRVVE 509
+ G +DVPVGE +LGRV++
Sbjct: 96 PARLAGRTLDVPVGETLLGRVID 118
Score = 52.0 bits (119), Expect = 2e-05
Identities = 22/50 (44%), Positives = 35/50 (70%)
Frame = +2
Query: 512 LGNPIDGKGPIDTKSRMRVGIKAPGIIPRVSVREPMQNGIKAVDSLVPIG 661
+GNP+DG P++T++R + +P II R V++P+ G + VD+LVPIG
Sbjct: 120 IGNPLDGGRPLETRNRRPLDSPSPPIIARDFVQQPLYTGTRLVDTLVPIG 169
>UniRef50_A0VM48 Cluster: Putative uncharacterized protein; n=3;
Alphaproteobacteria|Rep: Putative uncharacterized
protein - Dinoroseobacter shibae DFL 12
Length = 950
Score = 56.4 bits (130), Expect = 8e-07
Identities = 26/75 (34%), Positives = 45/75 (60%)
Frame = -2
Query: 485 LSDGNVYDSTSTLDNISFLDKLVITKYYHTHIVRFQVKGHSLEA*GELHHLLSLDVLQAI 306
++ G+V+D LD+++FLD V + + THIV F+V+GH +A EL H L V+Q +
Sbjct: 718 VAHGHVHDGLGALDDVAFLDVPVRAEDHDTHIVDFEVQGHPADAARELDHFTGLHVVQPV 777
Query: 305 NTSDTITNAQDTTSL 261
+ + + +A+ L
Sbjct: 778 DPCNPVADAEHAAHL 792
>UniRef50_Q9TAH9 Cluster: ATP synthase subunit alpha; n=1; Cafeteria
roenbergensis|Rep: ATP synthase subunit alpha -
Cafeteria roenbergensis
Length = 601
Score = 54.4 bits (125), Expect = 3e-06
Identities = 33/97 (34%), Positives = 54/97 (55%), Gaps = 16/97 (16%)
Frame = +3
Query: 267 GRVLSIGDGIARVYGLKNIQAEEMVEF-----------SSG-----LKGMALNLEPDNVG 398
G V + DG+A V L N++ E+V F S G ++GM + +E D +
Sbjct: 50 GEVEKVKDGVAFVTRLGNVRFSELVSFIPAPSRLKSLRSKGNSNLIVEGMVVGIEQDYIS 109
Query: 399 VVVFGNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVE 509
V++FG+++ +K GD V+ G IV + VG +LGRV++
Sbjct: 110 VIIFGDERFVKVGDRVRPRGNIVAINVGIGLLGRVID 146
Score = 45.2 bits (102), Expect = 0.002
Identities = 27/55 (49%), Positives = 32/55 (58%)
Frame = +2
Query: 536 GPIDTKSRMRVGIKAPGIIPRVSVREPMQNGIKAVDSLVPIGPWSSVN*FIGDRQ 700
G I T V I+APGII R SV +P+ G+ VDS+VPIG IGDRQ
Sbjct: 176 GRIVTGYSRPVEIQAPGIIVRKSVNKPLLTGLNCVDSMVPIG-LGQRELIIGDRQ 229
>UniRef50_A7DHD0 Cluster: Putative uncharacterized protein; n=2;
Methylobacterium extorquens PA1|Rep: Putative
uncharacterized protein - Methylobacterium extorquens
PA1
Length = 680
Score = 52.0 bits (119), Expect = 2e-05
Identities = 24/76 (31%), Positives = 44/76 (57%)
Frame = -2
Query: 503 YTPKDLLSDGNVYDSTSTLDNISFLDKLVITKYYHTHIVRFQVKGHSLEA*GELHHLLSL 324
+ + L+D +V+D LD ++FL+ V + + IV +V+GH+ A EL HL L
Sbjct: 465 HAAEQTLADRHVHDGAGPLDGLAFLNLTVGAEDHDADIVLLEVEGHAAHARLELDHLTGL 524
Query: 323 DVLQAINTSDTITNAQ 276
DV++A++ D + + +
Sbjct: 525 DVVEAVDAGDAVADRE 540
Score = 33.5 bits (73), Expect = 6.8
Identities = 18/47 (38%), Positives = 28/47 (59%)
Frame = -3
Query: 649 QRVNSLDTILHRFTHRHPGNDTWRLNTDPHTGFRVDWSLAINRVTQS 509
Q V+ L+ HR HR +D RL+ D T R+D +LA++RV ++
Sbjct: 416 QGVDRLEAGGHRLMHRLARDDARRLHVDAATLGRLDRALAVDRVAEA 462
>UniRef50_Q9G8S6 Cluster: ATP synthase F1 subunit alpha; n=1;
Naegleria gruberi|Rep: ATP synthase F1 subunit alpha -
Naegleria gruberi
Length = 550
Score = 51.2 bits (117), Expect = 3e-05
Identities = 32/84 (38%), Positives = 44/84 (52%), Gaps = 4/84 (4%)
Frame = +3
Query: 267 GRVLSIGDGIARVYGLKNIQAEEMVEFSS---GLKGMALNLEPDNVGVVVF-GNDKLIKE 434
G++ SI D + GL+N+ E+V+F S L G LNLE V +V+ G +K
Sbjct: 13 GKIKSIQDNVIIATGLENVFVGEVVKFKSQESNLLGQVLNLEKSQVRIVMINGQQSHLKS 72
Query: 435 GDIVKRTGAIVDVPVGEQILGRVV 506
D+V RT V G +LGRVV
Sbjct: 73 NDLVYRTYKDVKTKAGYGVLGRVV 96
Score = 39.1 bits (87), Expect = 0.14
Identities = 22/46 (47%), Positives = 25/46 (54%)
Frame = +2
Query: 566 VGIKAPGIIPRVSVREPMQNGIKAVDSLVPIGPWSSVN*FIGDRQT 703
V I APGII R VR P GI VD L+P+G IGD+ T
Sbjct: 126 VEIPAPGIIEREPVRVPFLTGINVVDCLIPVG-CGQRELIIGDQNT 170
>UniRef50_Q8R9Z1 Cluster: Flagellar biosynthesis/type III secretory
pathway ATPase; n=10; Bacteria|Rep: Flagellar
biosynthesis/type III secretory pathway ATPase -
Thermoanaerobacter tengcongensis
Length = 437
Score = 50.4 bits (115), Expect = 6e-05
Identities = 25/60 (41%), Positives = 33/60 (55%)
Frame = +2
Query: 512 LGNPIDGKGPIDTKSRMRVGIKAPGIIPRVSVREPMQNGIKAVDSLVPIGPWSSVN*FIG 691
LGNPIDGKGP+ + + V P + R +RE M GIKA+D L+ G + F G
Sbjct: 108 LGNPIDGKGPLKYEKSIPVNNTPPDPLERKRIREVMPLGIKAIDGLLTCGKGQRIGIFAG 167
>UniRef50_Q2F981 Cluster: Ribosomal protein S2; n=3; Oryza
sativa|Rep: Ribosomal protein S2 - Oryza sativa subsp.
indica (Rice)
Length = 483
Score = 50.4 bits (115), Expect = 6e-05
Identities = 26/57 (45%), Positives = 31/57 (54%)
Frame = +2
Query: 491 PWACSRALGNPIDGKGPIDTKSRMRVGIKAPGIIPRVSVREPMQNGIKAVDSLVPIG 661
P + + PI PI R + GI+ R SV EPMQ G+KAVDSLVPIG
Sbjct: 233 PGESHKRITYPIPANDPIQFVYLFRHSVTKTGILERKSVHEPMQTGLKAVDSLVPIG 289
>UniRef50_Q92FH0 Cluster: ATP synthase subunit alpha 1; n=13;
Listeria|Rep: ATP synthase subunit alpha 1 - Listeria
innocua
Length = 498
Score = 48.0 bits (109), Expect = 3e-04
Identities = 33/107 (30%), Positives = 49/107 (45%)
Frame = +3
Query: 255 LEETGRVLSIGDGIARVYGLKNIQAEEMVEFSSGLKGMALNLEPDNVGVVVFGNDKLIKE 434
L+E GRV I DG+ GL+N + V +G+ L L + VG+ + I E
Sbjct: 20 LKENGRVEKISDGVIFSSGLENAALHQAVTIDGRHRGVILELNEEFVGIGLIDKTNDILE 79
Query: 435 GDIVKRTGAIVDVPVGEQILGRVVELWVTLLMARDQSTRNPV*GSVL 575
G V T ++V + E + GR+++ T M D S P S L
Sbjct: 80 GMSVSVTDHFIEVNLFEDMAGRIID--TTGKMLYDVSDEQPTASSPL 124
>UniRef50_A1FHL5 Cluster: Putative uncharacterized protein; n=3;
Pseudomonadaceae|Rep: Putative uncharacterized protein -
Pseudomonas putida W619
Length = 601
Score = 46.8 bits (106), Expect = 7e-04
Identities = 28/94 (29%), Positives = 52/94 (55%)
Frame = -2
Query: 494 KDLLSDGNVYDSTSTLDNISFLDKLVITKYYHTHIVRFQVKGHSLEA*GELHHLLSLDVL 315
+ L++ N+ D+ L +F + ++ T+ + T+ V QV+GH+++A EL H DV
Sbjct: 445 QQFLTNRNLQDAAGALGAHAFGEGVIGTQDHCTYGVLLQVQGHAVDAARELDHFAVHDVG 504
Query: 314 QAINTSDTITNAQDTTSLF*SALGAAPRILSSRM 213
Q ++ DT+ N D T F + LGA ++ + +
Sbjct: 505 QTVDPHDTVGNRNDGT--FVTGLGAHIEVVDAAL 536
>UniRef50_A7CYE2 Cluster: Flagellar protein export ATPase FliI; n=1;
Opitutaceae bacterium TAV2|Rep: Flagellar protein export
ATPase FliI - Opitutaceae bacterium TAV2
Length = 461
Score = 46.4 bits (105), Expect = 0.001
Identities = 21/61 (34%), Positives = 33/61 (54%)
Frame = +2
Query: 509 ALGNPIDGKGPIDTKSRMRVGIKAPGIIPRVSVREPMQNGIKAVDSLVPIGPWSSVN*FI 688
ALG P DG GP+ T+ V + P + R +RE + G++A+D+ P+G + F
Sbjct: 123 ALGRPFDGAGPVPTRRVDAVHSRPPHPLRRQRIREALPTGVRALDAFTPLGRGQRLGLFA 182
Query: 689 G 691
G
Sbjct: 183 G 183
>UniRef50_Q7UIJ0 Cluster: Flagellum-specific ATP synthase; n=3;
Planctomycetaceae|Rep: Flagellum-specific ATP synthase -
Rhodopirellula baltica
Length = 467
Score = 44.0 bits (99), Expect = 0.005
Identities = 21/61 (34%), Positives = 32/61 (52%)
Frame = +2
Query: 509 ALGNPIDGKGPIDTKSRMRVGIKAPGIIPRVSVREPMQNGIKAVDSLVPIGPWSSVN*FI 688
A G PIDGK D R+ AP + R + EP+Q G++A+D+++ G + F
Sbjct: 118 AFGRPIDGKPLSDDLVRVSASRAAPDSLDRPPIDEPLQTGVRAIDAMLTCGVGQRLGIFA 177
Query: 689 G 691
G
Sbjct: 178 G 178
>UniRef50_A3IIS5 Cluster: Putative uncharacterized protein; n=1;
Cyanothece sp. CCY 0110|Rep: Putative uncharacterized
protein - Cyanothece sp. CCY 0110
Length = 67
Score = 43.6 bits (98), Expect = 0.006
Identities = 22/44 (50%), Positives = 27/44 (61%)
Frame = -1
Query: 642 STALIPFCIGSRTDTRGMIPGALIPTLIRDFVSIGPLPSIGLPK 511
S A+IP C+GS+TD R +IPGA V I P PSIG P+
Sbjct: 3 SIAVIPVCMGSQTDLRAIIPGAGDSIKRLSDVLISPFPSIGRPR 46
>UniRef50_Q67K17 Cluster: Flagellar-specific ATP synthase; n=1;
Symbiobacterium thermophilum|Rep: Flagellar-specific ATP
synthase - Symbiobacterium thermophilum
Length = 436
Score = 41.9 bits (94), Expect = 0.019
Identities = 20/60 (33%), Positives = 32/60 (53%)
Frame = +2
Query: 512 LGNPIDGKGPIDTKSRMRVGIKAPGIIPRVSVREPMQNGIKAVDSLVPIGPWSSVN*FIG 691
LGNPID KGP+ + AP + R + P+ G++A+D+L+ +G + F G
Sbjct: 104 LGNPIDDKGPLMGCGFRPILGPAPDPLARQRIHRPLSLGVRALDALITVGMGQRIGIFAG 163
>UniRef50_Q9BBC2 Cluster: ATPase CF1 alpha subunit; n=4;
Dinophyceae|Rep: ATPase CF1 alpha subunit - Amphidinium
carterae (Dinoflagellate)
Length = 464
Score = 40.3 bits (90), Expect = 0.059
Identities = 20/42 (47%), Positives = 27/42 (64%)
Frame = +2
Query: 578 APGIIPRVSVREPMQNGIKAVDSLVPIGPWSSVN*FIGDRQT 703
AP I+ R SV EP+ GI ++D+++PIG IGDRQT
Sbjct: 108 APSIVSRQSVCEPLATGIVSIDAMIPIGR-GQRELIIGDRQT 148
>UniRef50_Q4QJF1 Cluster: ATPase alpha subunit; n=9;
Trypanosomatidae|Rep: ATPase alpha subunit - Leishmania
major
Length = 574
Score = 40.3 bits (90), Expect = 0.059
Identities = 18/49 (36%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Frame = +3
Query: 363 GMALNLEPDN-VGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEQILGRVV 506
G+ NLE D +G+++ N ++ G V TG ++ +PVG +LG+VV
Sbjct: 80 GLVFNLEKDGRIGIILMDNITEVQSGQKVMATGKLLYIPVGAGVLGKVV 128
Score = 35.9 bits (79), Expect = 1.3
Identities = 19/47 (40%), Positives = 26/47 (55%)
Frame = +2
Query: 563 RVGIKAPGIIPRVSVREPMQNGIKAVDSLVPIGPWSSVN*FIGDRQT 703
+V AP I+ R V + G KAVD+++PIG +GDRQT
Sbjct: 155 KVDAGAPNIVSRSPVNYNLLTGFKAVDTMIPIGR-GQRELIVGDRQT 200
>UniRef50_P00830 Cluster: ATP synthase subunit beta, mitochondrial
precursor; n=14; cellular organisms|Rep: ATP synthase
subunit beta, mitochondrial precursor - Saccharomyces
cerevisiae (Baker's yeast)
Length = 511
Score = 39.9 bits (89), Expect = 0.079
Identities = 20/60 (33%), Positives = 29/60 (48%)
Frame = +2
Query: 512 LGNPIDGKGPIDTKSRMRVGIKAPGIIPRVSVREPMQNGIKAVDSLVPIGPWSSVN*FIG 691
+G PID +GPI +K R + P + + E ++ GIK VD L P + F G
Sbjct: 132 IGEPIDERGPIKSKLRKPIHADPPSFAEQSTSAEILETGIKVVDLLAPYARGGKIGLFGG 191
>UniRef50_Q92LK8 Cluster: ATP synthase subunit beta; n=32; cellular
organisms|Rep: ATP synthase subunit beta - Rhizobium
meliloti (Sinorhizobium meliloti)
Length = 504
Score = 39.5 bits (88), Expect = 0.10
Identities = 18/60 (30%), Positives = 30/60 (50%)
Frame = +2
Query: 512 LGNPIDGKGPIDTKSRMRVGIKAPGIIPRVSVREPMQNGIKAVDSLVPIGPWSSVN*FIG 691
+G P+D GP+ T +R + +AP + + + + + GIK VD L P + F G
Sbjct: 124 IGEPVDEAGPLKTSARRAIHQEAPAYVDQSTEAQILVTGIKVVDLLAPYAKGGKIGLFGG 183
>UniRef50_P06576 Cluster: ATP synthase subunit beta, mitochondrial
precursor; n=3027; cellular organisms|Rep: ATP synthase
subunit beta, mitochondrial precursor - Homo sapiens
(Human)
Length = 529
Score = 39.5 bits (88), Expect = 0.10
Identities = 21/60 (35%), Positives = 29/60 (48%)
Frame = +2
Query: 512 LGNPIDGKGPIDTKSRMRVGIKAPGIIPRVSVREPMQNGIKAVDSLVPIGPWSSVN*FIG 691
+G PID +GPI TK + +AP + +E + GIK VD L P + F G
Sbjct: 148 IGEPIDERGPIKTKQFAPIHAEAPEFMEMSVEQEILVTGIKVVDLLAPYAKGGKIGLFGG 207
>UniRef50_A7R4X8 Cluster: Chromosome undetermined scaffold_808,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_808, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 106
Score = 39.1 bits (87), Expect = 0.14
Identities = 18/36 (50%), Positives = 24/36 (66%)
Frame = +3
Query: 321 IQAEEMVEFSSGLKGMALNLEPDNVGVVVFGNDKLI 428
I A E+VEF G + LNLE +NVGVV+ G+ +I
Sbjct: 71 IMASELVEFEEGTIAITLNLESNNVGVVLMGDGLMI 106
>UniRef50_Q6KHZ3 Cluster: ATP synthase alpha chain; n=1; Mycoplasma
mobile|Rep: ATP synthase alpha chain - Mycoplasma mobile
Length = 516
Score = 37.9 bits (84), Expect = 0.32
Identities = 19/43 (44%), Positives = 28/43 (65%)
Frame = +2
Query: 575 KAPGIIPRVSVREPMQNGIKAVDSLVPIGPWSSVN*FIGDRQT 703
KA G++ R S+ EP+Q GI ++D L+P+G IGDR+T
Sbjct: 113 KALGMMFRKSLNEPVQTGIASIDMLIPLGK-GQRELIIGDRRT 154
>UniRef50_A4M4Z8 Cluster: Putative uncharacterized protein; n=1;
Geobacter bemidjiensis Bem|Rep: Putative uncharacterized
protein - Geobacter bemidjiensis Bem
Length = 519
Score = 37.9 bits (84), Expect = 0.32
Identities = 18/67 (26%), Positives = 36/67 (53%)
Frame = -2
Query: 473 NVYDSTSTLDNISFLDKLVITKYYHTHIVRFQVKGHSLEA*GELHHLLSLDVLQAINTSD 294
N+ D D ++FLD + + +V +V+ H+ +A GEL L +++ ++T D
Sbjct: 416 NLDDLAGQFDRVAFLDLGELAEDRRADVVFLEVQNHAGDAAGELEELACHRLVKTVDTCD 475
Query: 293 TITNAQD 273
T+T+ +
Sbjct: 476 TVTDGDN 482
>UniRef50_Q5FRC5 Cluster: ATP synthase subunit beta; n=266; cellular
organisms|Rep: ATP synthase subunit beta - Gluconobacter
oxydans (Gluconobacter suboxydans)
Length = 487
Score = 37.9 bits (84), Expect = 0.32
Identities = 18/48 (37%), Positives = 26/48 (54%)
Frame = +2
Query: 512 LGNPIDGKGPIDTKSRMRVGIKAPGIIPRVSVREPMQNGIKAVDSLVP 655
+G PID +GPI ++ R + AP + + E + GIK VD L P
Sbjct: 104 VGEPIDERGPISSELRFPIHRPAPSFEEQAAASEILVTGIKVVDLLCP 151
>UniRef50_Q9C5A9 Cluster: ATP synthase subunit beta-3, mitochondrial
precursor; n=1793; root|Rep: ATP synthase subunit
beta-3, mitochondrial precursor - Arabidopsis thaliana
(Mouse-ear cress)
Length = 559
Score = 37.9 bits (84), Expect = 0.32
Identities = 18/48 (37%), Positives = 27/48 (56%)
Frame = +2
Query: 512 LGNPIDGKGPIDTKSRMRVGIKAPGIIPRVSVREPMQNGIKAVDSLVP 655
LG PID +G I T+ + + AP ++ + +E + GIK VD L P
Sbjct: 176 LGEPIDERGEIKTEHYLPIHRDAPALVDLATGQEILATGIKVVDLLAP 223
>UniRef50_Q5NQY9 Cluster: ATP synthase subunit beta; n=169; cellular
organisms|Rep: ATP synthase subunit beta - Zymomonas
mobilis
Length = 484
Score = 37.5 bits (83), Expect = 0.42
Identities = 19/60 (31%), Positives = 28/60 (46%)
Frame = +2
Query: 512 LGNPIDGKGPIDTKSRMRVGIKAPGIIPRVSVREPMQNGIKAVDSLVPIGPWSSVN*FIG 691
+G P+D +GPI +K M + AP + + + GIK +D L P V F G
Sbjct: 98 VGRPVDERGPIGSKQTMPIHADAPPFTEQSTDTAILTTGIKVIDLLAPYSKGGKVGLFGG 157
>UniRef50_A5D0F3 Cluster: Flagellar biosynthesis/type III secretory
pathway ATPase; n=4; Bacteria|Rep: Flagellar
biosynthesis/type III secretory pathway ATPase -
Pelotomaculum thermopropionicum SI
Length = 446
Score = 37.1 bits (82), Expect = 0.55
Identities = 19/61 (31%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
Frame = +2
Query: 512 LGNPIDGKGPIDTKS-RMRVGIKAPGIIPRVSVREPMQNGIKAVDSLVPIGPWSSVN*FI 688
LG P+DG GP+ ++ V + P + R + E + G++AVD L+ G + F
Sbjct: 111 LGEPMDGLGPVGGRTENYPVDNRPPNPLKRRRITEVLSTGVRAVDGLLTCGRGQRIGIFS 170
Query: 689 G 691
G
Sbjct: 171 G 171
>UniRef50_Q55738 Cluster: DNA gyrase subunit A; n=37;
Cyanobacteria|Rep: DNA gyrase subunit A - Synechocystis
sp. (strain PCC 6803)
Length = 860
Score = 37.1 bits (82), Expect = 0.55
Identities = 23/60 (38%), Positives = 34/60 (56%), Gaps = 5/60 (8%)
Frame = +3
Query: 336 MVEFSSGLK-GMALNLEPDNVGVVVFGNDKLIKEGDIVKRTGAIV----DVPVGEQILGR 500
++ SSG+ GMA N+ P N+G V+ G LI+ +I ++ + D P G QILGR
Sbjct: 168 LINGSSGIAVGMATNIPPHNLGEVIDGAIALIRNPEITEQELMQIIPGPDFPTGAQILGR 227
>UniRef50_UPI00004D9CFE Cluster: FH1/FH2 domain-containing protein 3
(Formin homolog overexpressed in spleen 2) (hFHOS2)
(Formactin-2).; n=3; Xenopus tropicalis|Rep: FH1/FH2
domain-containing protein 3 (Formin homolog
overexpressed in spleen 2) (hFHOS2) (Formactin-2). -
Xenopus tropicalis
Length = 1524
Score = 36.7 bits (81), Expect = 0.73
Identities = 19/38 (50%), Positives = 25/38 (65%)
Frame = +2
Query: 146 PQWPWHLANYMSQPPTKLPRSPPSSKRGSLEPRPRLTR 259
P+WP S PPT+L +SPPSS R S +P+PRL +
Sbjct: 390 PEWP-------SPPPTRLAQSPPSSSRPS-QPQPRLAQ 419
>UniRef50_Q9PLK9 Cluster: Virulence ATPase, putative; n=9;
Chlamydiaceae|Rep: Virulence ATPase, putative -
Chlamydia muridarum
Length = 434
Score = 36.7 bits (81), Expect = 0.73
Identities = 18/57 (31%), Positives = 28/57 (49%)
Frame = +2
Query: 515 GNPIDGKGPIDTKSRMRVGIKAPGIIPRVSVREPMQNGIKAVDSLVPIGPWSSVN*F 685
GNP+DG P+ + P + R ++E GI+A+D+L+ IG V F
Sbjct: 107 GNPLDGNPPLPKSHLSPLFSPPPSPMSRTPIQEIFPTGIRAIDALLTIGEGQRVGIF 163
>UniRef50_Q74G36 Cluster: Flagellum-specific ATP synthase FliI;
n=15; Bacteria|Rep: Flagellum-specific ATP synthase FliI
- Geobacter sulfurreducens
Length = 441
Score = 36.3 bits (80), Expect = 0.97
Identities = 18/60 (30%), Positives = 30/60 (50%)
Frame = +2
Query: 512 LGNPIDGKGPIDTKSRMRVGIKAPGIIPRVSVREPMQNGIKAVDSLVPIGPWSSVN*FIG 691
LG PID KGP+ + + + R +R+P+ GI+A+++L+ G V G
Sbjct: 108 LGVPIDDKGPLAIREEYPIYANPVNPMKRRPIRQPLDLGIRAINALLTCGEGQRVGIMAG 167
>UniRef50_Q1IR49 Cluster: ATPase FliI/YscN; n=1; Acidobacteria
bacterium Ellin345|Rep: ATPase FliI/YscN - Acidobacteria
bacterium (strain Ellin345)
Length = 437
Score = 36.3 bits (80), Expect = 0.97
Identities = 22/61 (36%), Positives = 28/61 (45%)
Frame = +2
Query: 509 ALGNPIDGKGPIDTKSRMRVGIKAPGIIPRVSVREPMQNGIKAVDSLVPIGPWSSVN*FI 688
A G P+DG P + V AP R+ VRE M GI+A+D V G + F
Sbjct: 107 ATGAPLDGITPARPRGSRPVDGSAPLPYARIPVREVMPCGIRAIDGFVTCGRGQRIGIFG 166
Query: 689 G 691
G
Sbjct: 167 G 167
>UniRef50_A5KSP4 Cluster: Sodium-transporting two-sector ATPase;
n=1; candidate division TM7 genomosp. GTL1|Rep:
Sodium-transporting two-sector ATPase - candidate
division TM7 genomosp. GTL1
Length = 495
Score = 36.3 bits (80), Expect = 0.97
Identities = 17/49 (34%), Positives = 27/49 (55%)
Frame = +2
Query: 512 LGNPIDGKGPIDTKSRMRVGIKAPGIIPRVSVREPMQNGIKAVDSLVPI 658
L P+D KG + + +AP I+ R + E + +G+ AVD+L PI
Sbjct: 118 LCRPLDDKGTVRLDDTRPLFYEAPSIMERTMLSEQLPSGVTAVDALFPI 166
>UniRef50_Q8FXF0 Cluster: Flagellum-specific ATP synthase FliI; n=2;
Brucella|Rep: Flagellum-specific ATP synthase FliI -
Brucella suis
Length = 422
Score = 35.5 bits (78), Expect = 1.7
Identities = 18/51 (35%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Frame = +2
Query: 509 ALGNPIDGKGPIDTKSR-MRVGIKAPGIIPRVSVREPMQNGIKAVDSLVPI 658
ALGN IDGKG + +R M AP + R V ++ G+ +D P+
Sbjct: 114 ALGNAIDGKGALKLGTRPMAAESLAPAALRRARVDRGLRTGVNVIDIFTPL 164
>UniRef50_A5C604 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 256
Score = 35.5 bits (78), Expect = 1.7
Identities = 16/37 (43%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = -1
Query: 354 LRRTPPSPQP-GCSSSHKHERYHHQCSRHDQSLLVSL 247
LR P P+P GC S +HH+C +D+SL +SL
Sbjct: 205 LRVHQPHPEPEGCQDSKLSTGFHHECVENDRSLTLSL 241
>UniRef50_A4QBV3 Cluster: Putative uncharacterized protein; n=1;
Corynebacterium glutamicum R|Rep: Putative
uncharacterized protein - Corynebacterium glutamicum
(strain R)
Length = 386
Score = 35.1 bits (77), Expect = 2.2
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = -1
Query: 339 PSPQPGCSSSHKHERYHHQCSRHDQSLL 256
P PQ SH H+R HH RHD+++L
Sbjct: 216 PHPQRNAQRSHTHQREHHGHQRHDEAVL 243
>UniRef50_Q5KH32 Cluster: Putative uncharacterized protein; n=2;
Filobasidiella neoformans|Rep: Putative uncharacterized
protein - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 1082
Score = 35.1 bits (77), Expect = 2.2
Identities = 18/39 (46%), Positives = 22/39 (56%)
Frame = +2
Query: 485 ADPWACSRALGNPIDGKGPIDTKSRMRVGIKAPGIIPRV 601
A W CSRA NP DGK P K+ + V ++P I P V
Sbjct: 798 ASSWDCSRATDNP-DGKRPDGDKTPVAVASRSPVISPNV 835
>UniRef50_UPI00006C0889 Cluster: PREDICTED: hypothetical protein;
n=3; Homo/Pan/Gorilla group|Rep: PREDICTED: hypothetical
protein - Homo sapiens
Length = 535
Score = 34.7 bits (76), Expect = 3.0
Identities = 17/42 (40%), Positives = 21/42 (50%)
Frame = -1
Query: 408 ILPHPHCQVPS*GPFP*GLRRTPPSPQPGCSSSHKHERYHHQ 283
+L H H VPS P +PP QP S H H+ +HHQ
Sbjct: 19 LLSHSHASVPSKSP-------SPPILQPAGSHPHAHQHHHHQ 53
>UniRef50_Q93UD9 Cluster: ATP synthase beta subunit; n=12;
Candidatus Carsonella ruddii|Rep: ATP synthase beta
subunit - Carsonella ruddii
Length = 139
Score = 34.3 bits (75), Expect = 3.9
Identities = 16/48 (33%), Positives = 26/48 (54%)
Frame = +2
Query: 512 LGNPIDGKGPIDTKSRMRVGIKAPGIIPRVSVREPMQNGIKAVDSLVP 655
LGNPID KG I + ++ + P ++ + ++ GIK +D L P
Sbjct: 89 LGNPIDNKGNIFSSKKVPIHKLPPKFSDQIFNNDILETGIKIIDLLCP 136
>UniRef50_P55717 Cluster: Probable ATP synthase y4yI; n=27;
Bacteria|Rep: Probable ATP synthase y4yI - Rhizobium sp.
(strain NGR234)
Length = 451
Score = 34.3 bits (75), Expect = 3.9
Identities = 16/47 (34%), Positives = 25/47 (53%)
Frame = +2
Query: 521 PIDGKGPIDTKSRMRVGIKAPGIIPRVSVREPMQNGIKAVDSLVPIG 661
P+DGKG + T + +AP + R V P G++A+D L+ G
Sbjct: 126 PLDGKGEVKTTEVRPLHGRAPNPMTRRMVERPFPLGVRALDGLLTCG 172
>UniRef50_O83417 Cluster: Flagellum-specific ATP synthase; n=42;
Bacteria|Rep: Flagellum-specific ATP synthase -
Treponema pallidum
Length = 447
Score = 34.3 bits (75), Expect = 3.9
Identities = 19/61 (31%), Positives = 29/61 (47%)
Frame = +2
Query: 509 ALGNPIDGKGPIDTKSRMRVGIKAPGIIPRVSVREPMQNGIKAVDSLVPIGPWSSVN*FI 688
A G IDGKG I R V + + R+ + M G++ +DSL+ +G + F
Sbjct: 108 AFGKAIDGKGEIYAPLRSEVLRASSNPMERLPITRQMVTGVRVLDSLLAVGCGQRLGIFS 167
Query: 689 G 691
G
Sbjct: 168 G 168
>UniRef50_UPI0000DB7ADE Cluster: PREDICTED: similar to RhoGAP93B
CG3421-PA; n=1; Apis mellifera|Rep: PREDICTED: similar
to RhoGAP93B CG3421-PA - Apis mellifera
Length = 1054
Score = 33.9 bits (74), Expect = 5.2
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = -1
Query: 354 LRRTPPSPQPGCSSSHKHERYHHQCSRH 271
L+ +PPSP P H H +HH ++H
Sbjct: 18 LQTSPPSPSPSSRRHHHHHHHHHHNNKH 45
>UniRef50_Q60DN8 Cluster: Putative uncharacterized protein
OSJNBa0038E17.20; n=1; Oryza sativa (japonica
cultivar-group)|Rep: Putative uncharacterized protein
OSJNBa0038E17.20 - Oryza sativa subsp. japonica (Rice)
Length = 255
Score = 33.9 bits (74), Expect = 5.2
Identities = 17/42 (40%), Positives = 21/42 (50%)
Frame = +2
Query: 185 PPTKLPRSPPSSKRGSLEPRPRLTRRDWSCLEHW*WYRSCLW 310
PP+ LP P+S+R PR RL R W E W S +W
Sbjct: 203 PPSSLPSRLPTSRRRFASPRNRLEREKWKRREVMMWLPS-MW 243
>UniRef50_UPI00005F655A Cluster: COG1157: Flagellar
biosynthesis/type III secretory pathway ATPase; n=1;
Yersinia pestis Angola|Rep: COG1157: Flagellar
biosynthesis/type III secretory pathway ATPase -
Yersinia pestis Angola
Length = 389
Score = 33.5 bits (73), Expect = 6.8
Identities = 17/60 (28%), Positives = 30/60 (50%)
Frame = +2
Query: 512 LGNPIDGKGPIDTKSRMRVGIKAPGIIPRVSVREPMQNGIKAVDSLVPIGPWSSVN*FIG 691
LG P+DGKG + + ++ + + R +V P+ G+ A++ L+ IG V G
Sbjct: 109 LGEPLDGKGQLGGSTPLQQQLPQIHPLQRRAVDTPLDVGVNAINGLLTIGKGQRVGLMAG 168
>UniRef50_Q15V30 Cluster: Putative uncharacterized protein; n=1;
Pseudoalteromonas atlantica T6c|Rep: Putative
uncharacterized protein - Pseudoalteromonas atlantica
(strain T6c / BAA-1087)
Length = 135
Score = 33.5 bits (73), Expect = 6.8
Identities = 15/38 (39%), Positives = 23/38 (60%)
Frame = -3
Query: 664 RPNWYQRVNSLDTILHRFTHRHPGNDTWRLNTDPHTGF 551
+PN + SL TI + + H +PGN W+LNT+ + F
Sbjct: 59 QPNGPDSMESLTTIDNTYVHNNPGN--WQLNTETYFNF 94
>UniRef50_A3L181 Cluster: ATP synthase beta chain; n=3;
Gammaproteobacteria|Rep: ATP synthase beta chain -
Pseudomonas aeruginosa C3719
Length = 154
Score = 33.5 bits (73), Expect = 6.8
Identities = 14/37 (37%), Positives = 24/37 (64%)
Frame = +3
Query: 402 VVFGNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVEL 512
+ G+ + +K G V TGA + VPVG+ LGR++++
Sbjct: 53 IAMGSTEGLKRGLNVDSTGAAISVPVGKATLGRIMDV 89
>UniRef50_P38168 Cluster: Putative uncharacterized protein YBL100C;
n=1; Saccharomyces cerevisiae|Rep: Putative
uncharacterized protein YBL100C - Saccharomyces
cerevisiae (Baker's yeast)
Length = 104
Score = 33.5 bits (73), Expect = 6.8
Identities = 15/21 (71%), Positives = 16/21 (76%)
Frame = -3
Query: 322 MFFKP*TRAIPSPMLKTRPVS 260
M FKP TRAIPSP +T PVS
Sbjct: 1 MLFKPKTRAIPSPTARTLPVS 21
>UniRef50_Q98NT5 Cluster: Mlr9748 protein; n=18;
Alphaproteobacteria|Rep: Mlr9748 protein - Rhizobium
loti (Mesorhizobium loti)
Length = 149
Score = 33.1 bits (72), Expect = 9.0
Identities = 14/24 (58%), Positives = 19/24 (79%)
Frame = -2
Query: 134 FDTWVAALGKRLATEPAIRAEISD 63
+D +V+ALG+RLA PA+R EI D
Sbjct: 115 YDAFVSALGRRLAKGPALRQEIPD 138
>UniRef50_A7QAH4 Cluster: Chromosome undetermined scaffold_71, whole
genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_71, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 43
Score = 33.1 bits (72), Expect = 9.0
Identities = 14/30 (46%), Positives = 21/30 (70%)
Frame = +3
Query: 255 LEETGRVLSIGDGIARVYGLKNIQAEEMVE 344
L+ G VL +GDGIA ++GL + A E+V+
Sbjct: 13 LKIVGTVLQVGDGIACIHGLNEVIASELVK 42
>UniRef50_O94034 Cluster: Nucleotide phosphodiesterase; n=4;
Saccharomycetales|Rep: Nucleotide phosphodiesterase -
Candida albicans (Yeast)
Length = 571
Score = 33.1 bits (72), Expect = 9.0
Identities = 18/65 (27%), Positives = 34/65 (52%)
Frame = -2
Query: 461 STSTLDNISFLDKLVITKYYHTHIVRFQVKGHSLEA*GELHHLLSLDVLQAINTSDTITN 282
+TS LDN+ F DK ++ +++ TH+ ++G + + G+L+ +S N + N
Sbjct: 75 NTSKLDNLPFSDKSLLIQFFFTHLNILMIQGENSDE-GKLYQEISSAKELLTNRISRVGN 133
Query: 281 AQDTT 267
TT
Sbjct: 134 WTGTT 138
>UniRef50_Q98QB7 Cluster: ATP synthase subunit alpha 2; n=1;
Mycoplasma pulmonis|Rep: ATP synthase subunit alpha 2 -
Mycoplasma pulmonis
Length = 513
Score = 33.1 bits (72), Expect = 9.0
Identities = 14/28 (50%), Positives = 20/28 (71%)
Frame = +2
Query: 578 APGIIPRVSVREPMQNGIKAVDSLVPIG 661
A GI RV + EP++ GI ++D L+PIG
Sbjct: 116 ASGIQDRVKLNEPLETGIFSIDILLPIG 143
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 871,476,536
Number of Sequences: 1657284
Number of extensions: 19151601
Number of successful extensions: 60360
Number of sequences better than 10.0: 71
Number of HSP's better than 10.0 without gapping: 55823
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 60162
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 74193458591
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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