Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= psV30430.Seq
         (846 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL023815-4|CAF31480.1|  511|Caenorhabditis elegans Hypothetical ...   155   5e-38
AL023815-1|CAA19429.1|  538|Caenorhabditis elegans Hypothetical ...   155   5e-38
AL023815-2|CAD92383.1|  146|Caenorhabditis elegans Hypothetical ...   107   7e-24
AL023815-3|CAD92384.1|  503|Caenorhabditis elegans Hypothetical ...   100   1e-21
U10402-2|AAA19068.2|  538|Caenorhabditis elegans Atp synthase su...    39   0.004
AF078157-2|AAN84818.1|  176|Caenorhabditis elegans Hypothetical ...    31   0.78 
AF078157-1|AAG24071.1|  235|Caenorhabditis elegans Hypothetical ...    31   0.78 
Z92973-7|CAB07494.1| 1213|Caenorhabditis elegans Hypothetical pr...    30   2.4  
Z81481-10|CAB03951.1| 1213|Caenorhabditis elegans Hypothetical p...    30   2.4  
U64858-4|AAB18282.2|  151|Caenorhabditis elegans Hypothetical pr...    30   2.4  
Z83125-7|CAB05619.1|  407|Caenorhabditis elegans Hypothetical pr...    29   3.1  
Z82258-1|CAB05122.2|  906|Caenorhabditis elegans Hypothetical pr...    29   4.2  
AL033512-1|CAA22076.1|  606|Caenorhabditis elegans Hypothetical ...    29   4.2  
AL031635-9|CAH04762.1| 1136|Caenorhabditis elegans Hypothetical ...    29   4.2  
AL031635-8|CAA21041.2| 1088|Caenorhabditis elegans Hypothetical ...    29   4.2  
AC006637-1|AAK85476.2|  342|Caenorhabditis elegans Hypothetical ...    28   7.3  
Z81531-10|CAE17807.1|  367|Caenorhabditis elegans Hypothetical p...    28   9.6  

>AL023815-4|CAF31480.1|  511|Caenorhabditis elegans Hypothetical
           protein H28O16.1d protein.
          Length = 511

 Score =  155 bits (375), Expect = 5e-38
 Identities = 73/85 (85%), Positives = 82/85 (96%)
 Frame = +3

Query: 255 LEETGRVLSIGDGIARVYGLKNIQAEEMVEFSSGLKGMALNLEPDNVGVVVFGNDKLIKE 434
           LEETG+VLSIGDGIARVYGLKNIQAEEMVEF SG+KGMA+NL+ DNVGVVVFGNDK+I+E
Sbjct: 26  LEETGKVLSIGDGIARVYGLKNIQAEEMVEFDSGIKGMAMNLDVDNVGVVVFGNDKVIRE 85

Query: 435 GDIVKRTGAIVDVPVGEQILGRVVE 509
           GDIVKRTGAIVDVPVG+ +LGRVV+
Sbjct: 86  GDIVKRTGAIVDVPVGDGLLGRVVD 110



 Score = 90.2 bits (214), Expect = 2e-18
 Identities = 46/65 (70%), Positives = 49/65 (75%)
 Frame = +2

Query: 509 ALGNPIDGKGPIDTKSRMRVGIKAPGIIPRVSVREPMQNGIKAVDSLVPIGPWSSVN*FI 688
           ALGNPIDGKGPI    R RV +KAPGIIPR+SVREPM  G+KAVDSLVPIG        I
Sbjct: 111 ALGNPIDGKGPIANARRSRVEVKAPGIIPRLSVREPMVTGVKAVDSLVPIGR-GQRELII 169

Query: 689 GDRQT 703
           GDRQT
Sbjct: 170 GDRQT 174


>AL023815-1|CAA19429.1|  538|Caenorhabditis elegans Hypothetical
           protein H28O16.1a protein.
          Length = 538

 Score =  155 bits (375), Expect = 5e-38
 Identities = 73/85 (85%), Positives = 82/85 (96%)
 Frame = +3

Query: 255 LEETGRVLSIGDGIARVYGLKNIQAEEMVEFSSGLKGMALNLEPDNVGVVVFGNDKLIKE 434
           LEETG+VLSIGDGIARVYGLKNIQAEEMVEF SG+KGMA+NL+ DNVGVVVFGNDK+I+E
Sbjct: 53  LEETGKVLSIGDGIARVYGLKNIQAEEMVEFDSGIKGMAMNLDVDNVGVVVFGNDKVIRE 112

Query: 435 GDIVKRTGAIVDVPVGEQILGRVVE 509
           GDIVKRTGAIVDVPVG+ +LGRVV+
Sbjct: 113 GDIVKRTGAIVDVPVGDGLLGRVVD 137



 Score = 90.2 bits (214), Expect = 2e-18
 Identities = 46/65 (70%), Positives = 49/65 (75%)
 Frame = +2

Query: 509 ALGNPIDGKGPIDTKSRMRVGIKAPGIIPRVSVREPMQNGIKAVDSLVPIGPWSSVN*FI 688
           ALGNPIDGKGPI    R RV +KAPGIIPR+SVREPM  G+KAVDSLVPIG        I
Sbjct: 138 ALGNPIDGKGPIANARRSRVEVKAPGIIPRLSVREPMVTGVKAVDSLVPIGR-GQRELII 196

Query: 689 GDRQT 703
           GDRQT
Sbjct: 197 GDRQT 201


>AL023815-2|CAD92383.1|  146|Caenorhabditis elegans Hypothetical
           protein H28O16.1b protein.
          Length = 146

 Score =  107 bits (258), Expect = 7e-24
 Identities = 50/57 (87%), Positives = 55/57 (96%)
 Frame = +3

Query: 255 LEETGRVLSIGDGIARVYGLKNIQAEEMVEFSSGLKGMALNLEPDNVGVVVFGNDKL 425
           LEETG+VLSIGDGIARVYGLKNIQAEEMVEF SG+KGMA+NL+ DNVGVVVFGNDK+
Sbjct: 53  LEETGKVLSIGDGIARVYGLKNIQAEEMVEFDSGIKGMAMNLDVDNVGVVVFGNDKI 109


>AL023815-3|CAD92384.1|  503|Caenorhabditis elegans Hypothetical
           protein H28O16.1c protein.
          Length = 503

 Score =  100 bits (239), Expect = 1e-21
 Identities = 47/54 (87%), Positives = 51/54 (94%)
 Frame = +3

Query: 255 LEETGRVLSIGDGIARVYGLKNIQAEEMVEFSSGLKGMALNLEPDNVGVVVFGN 416
           LEETG+VLSIGDGIARVYGLKNIQAEEMVEF SG+KGMA+NL+ DNVGVVV GN
Sbjct: 53  LEETGKVLSIGDGIARVYGLKNIQAEEMVEFDSGIKGMAMNLDVDNVGVVVLGN 106



 Score = 88.6 bits (210), Expect = 5e-18
 Identities = 45/64 (70%), Positives = 48/64 (75%)
 Frame = +2

Query: 512 LGNPIDGKGPIDTKSRMRVGIKAPGIIPRVSVREPMQNGIKAVDSLVPIGPWSSVN*FIG 691
           LGNPIDGKGPI    R RV +KAPGIIPR+SVREPM  G+KAVDSLVPIG        IG
Sbjct: 104 LGNPIDGKGPIANARRSRVEVKAPGIIPRLSVREPMVTGVKAVDSLVPIGR-GQRELIIG 162

Query: 692 DRQT 703
           DRQT
Sbjct: 163 DRQT 166


>U10402-2|AAA19068.2|  538|Caenorhabditis elegans Atp synthase
           subunit protein 2 protein.
          Length = 538

 Score = 39.1 bits (87), Expect = 0.004
 Identities = 20/60 (33%), Positives = 30/60 (50%)
 Frame = +2

Query: 512 LGNPIDGKGPIDTKSRMRVGIKAPGIIPRVSVREPMQNGIKAVDSLVPIGPWSSVN*FIG 691
           +G PID +GPI +K+   +  +AP  +     +E +  GIK VD L P      +  F G
Sbjct: 157 IGEPIDERGPIASKNFAAIHAEAPEFVEMSVEQEILVTGIKVVDLLAPYAKGGKIGLFGG 216


>AF078157-2|AAN84818.1|  176|Caenorhabditis elegans Hypothetical
           protein F25E5.8b protein.
          Length = 176

 Score = 31.5 bits (68), Expect = 0.78
 Identities = 18/47 (38%), Positives = 23/47 (48%), Gaps = 2/47 (4%)
 Frame = -1

Query: 330 QPGCSSSHKHERYHHQCSRHDQSLLVSLGRGSK--DPLFEDGGDLGS 196
           + G S SHK E +HH+   H  SL      G K   P+ E+ GD  S
Sbjct: 37  EEGTSGSHKPEEHHHK-EHHGHSLYFGKHSGKKHLPPVVENDGDTHS 82


>AF078157-1|AAG24071.1|  235|Caenorhabditis elegans Hypothetical
           protein F25E5.8a protein.
          Length = 235

 Score = 31.5 bits (68), Expect = 0.78
 Identities = 18/47 (38%), Positives = 23/47 (48%), Gaps = 2/47 (4%)
 Frame = -1

Query: 330 QPGCSSSHKHERYHHQCSRHDQSLLVSLGRGSK--DPLFEDGGDLGS 196
           + G S SHK E +HH+   H  SL      G K   P+ E+ GD  S
Sbjct: 37  EEGTSGSHKPEEHHHK-EHHGHSLYFGKHSGKKHLPPVVENDGDTHS 82


>Z92973-7|CAB07494.1| 1213|Caenorhabditis elegans Hypothetical
           protein C38D9.5 protein.
          Length = 1213

 Score = 29.9 bits (64), Expect = 2.4
 Identities = 19/69 (27%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
 Frame = +3

Query: 303 VYGLKNIQAEEMVEFSSGLKGMALNLEPDNVGVVVFGNDK-LIKEGDIVKRTGAIVDVPV 479
           + GL  +Q+  + E   G+K +  +L   +       +DK LIK G I+ +   I  VP+
Sbjct: 631 IAGLPEMQSSWIQENRDGMKKLLDDLTKLDKYAKDHSSDKDLIKYGSILSKASEITGVPI 690

Query: 480 GEQILGRVV 506
              ++G+ V
Sbjct: 691 DTSLIGKSV 699


>Z81481-10|CAB03951.1| 1213|Caenorhabditis elegans Hypothetical
           protein C38D9.5 protein.
          Length = 1213

 Score = 29.9 bits (64), Expect = 2.4
 Identities = 19/69 (27%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
 Frame = +3

Query: 303 VYGLKNIQAEEMVEFSSGLKGMALNLEPDNVGVVVFGNDK-LIKEGDIVKRTGAIVDVPV 479
           + GL  +Q+  + E   G+K +  +L   +       +DK LIK G I+ +   I  VP+
Sbjct: 631 IAGLPEMQSSWIQENRDGMKKLLDDLTKLDKYAKDHSSDKDLIKYGSILSKASEITGVPI 690

Query: 480 GEQILGRVV 506
              ++G+ V
Sbjct: 691 DTSLIGKSV 699


>U64858-4|AAB18282.2|  151|Caenorhabditis elegans Hypothetical
           protein C16D9.3 protein.
          Length = 151

 Score = 29.9 bits (64), Expect = 2.4
 Identities = 12/29 (41%), Positives = 15/29 (51%)
 Frame = -1

Query: 342 PPSPQPGCSSSHKHERYHHQCSRHDQSLL 256
           PP  Q  C      ER H  C R+DQS++
Sbjct: 96  PPGSQLKCHFDKSRERLHANCYRYDQSVV 124


>Z83125-7|CAB05619.1|  407|Caenorhabditis elegans Hypothetical
           protein T15D6.9 protein.
          Length = 407

 Score = 29.5 bits (63), Expect = 3.1
 Identities = 11/29 (37%), Positives = 16/29 (55%)
 Frame = -1

Query: 342 PPSPQPGCSSSHKHERYHHQCSRHDQSLL 256
           PP  Q  C   H   +Y+  C R+DQS++
Sbjct: 285 PPGSQSICIFLHDWNKYYADCFRYDQSII 313


>Z82258-1|CAB05122.2|  906|Caenorhabditis elegans Hypothetical
           protein C27H2.2a protein.
          Length = 906

 Score = 29.1 bits (62), Expect = 4.2
 Identities = 15/42 (35%), Positives = 23/42 (54%)
 Frame = +2

Query: 524 IDGKGPIDTKSRMRVGIKAPGIIPRVSVREPMQNGIKAVDSL 649
           IDG   ID K R+ +  K  G   RV+++E  +N    +DS+
Sbjct: 300 IDGTTTIDRKPRIVLREKKRGSAARVAMKEQWRNSTNMLDSI 341


>AL033512-1|CAA22076.1|  606|Caenorhabditis elegans Hypothetical
           protein Y49A3A.2 protein.
          Length = 606

 Score = 29.1 bits (62), Expect = 4.2
 Identities = 16/51 (31%), Positives = 25/51 (49%)
 Frame = +3

Query: 357 LKGMALNLEPDNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVE 509
           L G  + LE D   + V+     +  GD V RTG  + V +G  I+G + +
Sbjct: 39  LVGEIIRLEGDYATIQVYEETSGVTIGDPVLRTGKPLSVELGPGIMGSIFD 89


>AL031635-9|CAH04762.1| 1136|Caenorhabditis elegans Hypothetical
           protein Y47D3B.5b protein.
          Length = 1136

 Score = 29.1 bits (62), Expect = 4.2
 Identities = 13/38 (34%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
 Frame = +3

Query: 420 KLIKEGDIVK-RTGAIVDVPVGEQILGRVVELWVTLLM 530
           K++K G+IV+  TGA  D     ++  R + +W+ LL+
Sbjct: 311 KILKSGEIVEANTGAEADPEKKPEVESRTIPIWLALLI 348


>AL031635-8|CAA21041.2| 1088|Caenorhabditis elegans Hypothetical
           protein Y47D3B.5a protein.
          Length = 1088

 Score = 29.1 bits (62), Expect = 4.2
 Identities = 13/38 (34%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
 Frame = +3

Query: 420 KLIKEGDIVK-RTGAIVDVPVGEQILGRVVELWVTLLM 530
           K++K G+IV+  TGA  D     ++  R + +W+ LL+
Sbjct: 311 KILKSGEIVEANTGAEADPEKKPEVESRTIPIWLALLI 348


>AC006637-1|AAK85476.2|  342|Caenorhabditis elegans Hypothetical
           protein F41B4.1 protein.
          Length = 342

 Score = 28.3 bits (60), Expect = 7.3
 Identities = 13/32 (40%), Positives = 15/32 (46%)
 Frame = -1

Query: 351 RRTPPSPQPGCSSSHKHERYHHQCSRHDQSLL 256
           R  PP P P  + SHK+E      SR   S L
Sbjct: 54  RELPPPPPPRKTPSHKYEEMRRSLSRGPSSTL 85


>Z81531-10|CAE17807.1|  367|Caenorhabditis elegans Hypothetical
           protein F36D3.13 protein.
          Length = 367

 Score = 27.9 bits (59), Expect = 9.6
 Identities = 10/34 (29%), Positives = 19/34 (55%)
 Frame = -2

Query: 518 YPKLYYTPKDLLSDGNVYDSTSTLDNISFLDKLV 417
           +PK Y  P   + +  ++D   T  N++FL+ +V
Sbjct: 196 FPKNYSQPLYFMEETKIFDGEITFQNLTFLEGIV 229


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,292,122
Number of Sequences: 27780
Number of extensions: 426614
Number of successful extensions: 1348
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1237
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1342
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2098003600
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)