Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= psV30428.Seq
         (681 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.         25   1.7  
U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.         25   1.7  
AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.            24   5.1  
AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha ...    23   6.7  
AY928182-1|AAX22219.1|  335|Anopheles gambiae phenoloxidase inhi...    23   8.9  
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            23   8.9  

>U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 25.4 bits (53), Expect = 1.7
 Identities = 11/28 (39%), Positives = 16/28 (57%)
 Frame = +2

Query: 434 PHCIPSLGKYRLLSCELLQHLGGTSSLS 517
           PH +P LG       ++ QH+ GT SL+
Sbjct: 368 PHNMPPLGSLCKTVSQIGQHVAGTGSLN 395


>U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 25.4 bits (53), Expect = 1.7
 Identities = 11/28 (39%), Positives = 16/28 (57%)
 Frame = +2

Query: 434 PHCIPSLGKYRLLSCELLQHLGGTSSLS 517
           PH +P LG       ++ QH+ GT SL+
Sbjct: 368 PHNMPPLGSLCKTVSQIGQHVAGTGSLN 395


>AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.
          Length = 1356

 Score = 23.8 bits (49), Expect = 5.1
 Identities = 16/64 (25%), Positives = 29/64 (45%), Gaps = 2/64 (3%)
 Frame = +3

Query: 333 YSLTFKPLSRISSALAPRTVQWTAIFS--LRRIPKDRTVYLALENTGCCPVSCSNTLAAR 506
           + + +  LS+   + AP   +W       L  + + RT+   LENT    +   NT+  R
Sbjct: 16  FGVFWASLSKSLVSQAPDECRWDGYTEDDLTLLCRLRTINSELENTNFSVLHPENTVRLR 75

Query: 507 VACH 518
           + C+
Sbjct: 76  LQCN 79


>AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha 1
           chain precursor protein.
          Length = 801

 Score = 23.4 bits (48), Expect = 6.7
 Identities = 7/20 (35%), Positives = 12/20 (60%)
 Frame = -2

Query: 206 GRPGFNVAHRRRKTGKVGFP 147
           G+PG+ +  ++   G  GFP
Sbjct: 498 GQPGYGIPGQKGNAGMAGFP 517


>AY928182-1|AAX22219.1|  335|Anopheles gambiae phenoloxidase
           inhibitor protein protein.
          Length = 335

 Score = 23.0 bits (47), Expect = 8.9
 Identities = 13/46 (28%), Positives = 20/46 (43%)
 Frame = +2

Query: 344 FQTPLKDFFCFSSSDCTMDSNLFITTDTKRPHCIPSLGKYRLLSCE 481
           + TP      F++      S++  TT T  P     +G+Y L S E
Sbjct: 134 YSTPQISMVNFTNRIGDETSSILTTTHTSVPKMCAKIGEYCLTSSE 179


>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 23.0 bits (47), Expect = 8.9
 Identities = 14/46 (30%), Positives = 23/46 (50%), Gaps = 2/46 (4%)
 Frame = -3

Query: 385  RGAKAEEILERGLKVREYELRRDNFSATGNFGFGI--QEHIDLGIN 254
            R A   + LE    + +++L  +N  +  NF FG+  QE + L  N
Sbjct: 3256 RIAALSDELEESRHILQHKLYSNNSQSLNNFKFGLHTQEILPLQFN 3301


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 652,807
Number of Sequences: 2352
Number of extensions: 13380
Number of successful extensions: 22
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 68577420
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)