Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= psV30428.Seq
         (681 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U15643-1|AAC46585.1|  184|Drosophila melanogaster ribosomal prot...   174   1e-43
AY094790-1|AAM11143.1|  184|Drosophila melanogaster LD17235p pro...   174   1e-43
AE013599-2887|AAF57560.1|  184|Drosophila melanogaster CG7726-PA...   174   1e-43
BT022593-1|AAY55009.1|  163|Drosophila melanogaster IP06777p pro...   129   3e-30

>U15643-1|AAC46585.1|  184|Drosophila melanogaster ribosomal protein
           DL11 protein.
          Length = 184

 Score =  174 bits (423), Expect = 1e-43
 Identities = 83/90 (92%), Positives = 86/90 (95%)
 Frame = -3

Query: 508 TRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKIAVHCTVRGAKAEEILERGLKVREYE 329
           TRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKIAVHCTVRGAKAEEILERGLKVREYE
Sbjct: 39  TRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKIAVHCTVRGAKAEEILERGLKVREYE 98

Query: 328 LRRDNFSATGNFGFGIQEHIDLGINTIPQL 239
           LRR+NFS+TGNFGFGIQEHIDLGI   P +
Sbjct: 99  LRRENFSSTGNFGFGIQEHIDLGIKYDPSI 128



 Score =  116 bits (280), Expect = 2e-26
 Identities = 50/58 (86%), Positives = 54/58 (93%)
 Frame = -2

Query: 266 LGYQYDPSIGIYGLDFYVVLGRPGFNVAHRRRKTGKVGFPHRLTKEDAMKWFQQKYDG 93
           LG +YDPSIGIYGLDFYVVLGRPG+NV HR+RK+G VGF HRLTKEDAMKWFQQKYDG
Sbjct: 120 LGIKYDPSIGIYGLDFYVVLGRPGYNVNHRKRKSGTVGFQHRLTKEDAMKWFQQKYDG 177



 Score = 46.0 bits (104), Expect = 5e-05
 Identities = 20/28 (71%), Positives = 23/28 (82%)
 Frame = -1

Query: 591 DNSKNVMRNLHIRKLCLNICVGESGDRL 508
           D ++    +LHIRKLCLNICVGESGDRL
Sbjct: 11  DPAQEPDEDLHIRKLCLNICVGESGDRL 38


>AY094790-1|AAM11143.1|  184|Drosophila melanogaster LD17235p
           protein.
          Length = 184

 Score =  174 bits (423), Expect = 1e-43
 Identities = 83/90 (92%), Positives = 86/90 (95%)
 Frame = -3

Query: 508 TRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKIAVHCTVRGAKAEEILERGLKVREYE 329
           TRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKIAVHCTVRGAKAEEILERGLKVREYE
Sbjct: 39  TRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKIAVHCTVRGAKAEEILERGLKVREYE 98

Query: 328 LRRDNFSATGNFGFGIQEHIDLGINTIPQL 239
           LRR+NFS+TGNFGFGIQEHIDLGI   P +
Sbjct: 99  LRRENFSSTGNFGFGIQEHIDLGIKYDPSI 128



 Score =  116 bits (280), Expect = 2e-26
 Identities = 50/58 (86%), Positives = 54/58 (93%)
 Frame = -2

Query: 266 LGYQYDPSIGIYGLDFYVVLGRPGFNVAHRRRKTGKVGFPHRLTKEDAMKWFQQKYDG 93
           LG +YDPSIGIYGLDFYVVLGRPG+NV HR+RK+G VGF HRLTKEDAMKWFQQKYDG
Sbjct: 120 LGIKYDPSIGIYGLDFYVVLGRPGYNVNHRKRKSGTVGFQHRLTKEDAMKWFQQKYDG 177



 Score = 55.2 bits (127), Expect = 8e-08
 Identities = 24/28 (85%), Positives = 26/28 (92%)
 Frame = -1

Query: 591 DNSKNVMRNLHIRKLCLNICVGESGDRL 508
           D +KN MR+LHIRKLCLNICVGESGDRL
Sbjct: 11  DPAKNPMRDLHIRKLCLNICVGESGDRL 38


>AE013599-2887|AAF57560.1|  184|Drosophila melanogaster CG7726-PA
           protein.
          Length = 184

 Score =  174 bits (423), Expect = 1e-43
 Identities = 83/90 (92%), Positives = 86/90 (95%)
 Frame = -3

Query: 508 TRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKIAVHCTVRGAKAEEILERGLKVREYE 329
           TRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKIAVHCTVRGAKAEEILERGLKVREYE
Sbjct: 39  TRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKIAVHCTVRGAKAEEILERGLKVREYE 98

Query: 328 LRRDNFSATGNFGFGIQEHIDLGINTIPQL 239
           LRR+NFS+TGNFGFGIQEHIDLGI   P +
Sbjct: 99  LRRENFSSTGNFGFGIQEHIDLGIKYDPSI 128



 Score =  116 bits (280), Expect = 2e-26
 Identities = 50/58 (86%), Positives = 54/58 (93%)
 Frame = -2

Query: 266 LGYQYDPSIGIYGLDFYVVLGRPGFNVAHRRRKTGKVGFPHRLTKEDAMKWFQQKYDG 93
           LG +YDPSIGIYGLDFYVVLGRPG+NV HR+RK+G VGF HRLTKEDAMKWFQQKYDG
Sbjct: 120 LGIKYDPSIGIYGLDFYVVLGRPGYNVNHRKRKSGTVGFQHRLTKEDAMKWFQQKYDG 177



 Score = 55.2 bits (127), Expect = 8e-08
 Identities = 24/28 (85%), Positives = 26/28 (92%)
 Frame = -1

Query: 591 DNSKNVMRNLHIRKLCLNICVGESGDRL 508
           D +KN MR+LHIRKLCLNICVGESGDRL
Sbjct: 11  DPAKNPMRDLHIRKLCLNICVGESGDRL 38


>BT022593-1|AAY55009.1|  163|Drosophila melanogaster IP06777p
           protein.
          Length = 163

 Score =  129 bits (312), Expect = 3e-30
 Identities = 61/70 (87%), Positives = 64/70 (91%)
 Frame = -3

Query: 448 RYTVRSFGIRRNEKIAVHCTVRGAKAEEILERGLKVREYELRRDNFSATGNFGFGIQEHI 269
           R  VRSFGIRRNEKIAVHCTVRGAKAEEILERGLKVREYELRR+NFS+TGNFGFGIQEHI
Sbjct: 38  RRCVRSFGIRRNEKIAVHCTVRGAKAEEILERGLKVREYELRRENFSSTGNFGFGIQEHI 97

Query: 268 DLGINTIPQL 239
           DLGI   P +
Sbjct: 98  DLGIKYDPSI 107



 Score =  116 bits (280), Expect = 2e-26
 Identities = 50/58 (86%), Positives = 54/58 (93%)
 Frame = -2

Query: 266 LGYQYDPSIGIYGLDFYVVLGRPGFNVAHRRRKTGKVGFPHRLTKEDAMKWFQQKYDG 93
           LG +YDPSIGIYGLDFYVVLGRPG+NV HR+RK+G VGF HRLTKEDAMKWFQQKYDG
Sbjct: 99  LGIKYDPSIGIYGLDFYVVLGRPGYNVNHRKRKSGTVGFQHRLTKEDAMKWFQQKYDG 156


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,027,956
Number of Sequences: 53049
Number of extensions: 591614
Number of successful extensions: 1662
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1599
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1662
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2971922400
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)