Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= psV30428.Seq
(681 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 27 0.22
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 27 0.22
DQ071552-1|AAY82248.1| 495|Apis mellifera anarchy 1 protein. 23 3.6
AY921573-1|AAX62923.1| 694|Apis mellifera D2-like dopamine rece... 23 3.6
AB267886-1|BAF46356.1| 567|Apis mellifera ecdysteroid receptor ... 23 3.6
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 22 4.7
AF388659-3|AAK71993.1| 548|Apis mellifera 1D-myo-inositol-trisp... 22 4.7
AF388659-2|AAK71994.1| 463|Apis mellifera 1D-myo-inositol-trisp... 22 4.7
AF388659-1|AAK71995.1| 782|Apis mellifera 1D-myo-inositol-trisp... 22 4.7
AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein. 22 6.2
AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein. 22 6.2
AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein. 22 6.2
AJ968562-1|CAI91546.1| 998|Apis mellifera protein ( Apis mellif... 21 8.2
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 26.6 bits (56), Expect = 0.22
Identities = 16/56 (28%), Positives = 29/56 (51%), Gaps = 4/56 (7%)
Frame = -3
Query: 424 IRRNEKIAVHCTVRGAKAEEILER---GLKVREY-ELRRDNFSATGNFGFGIQEHI 269
+ RN+ +A+HC +G I+ + G K EY ELR ++ + G + +H+
Sbjct: 721 VERNKHVALHCQAQGVPTPTIVWKKATGSKSGEYEELRERAYTKILSNGTLLLQHV 776
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 26.6 bits (56), Expect = 0.22
Identities = 16/56 (28%), Positives = 29/56 (51%), Gaps = 4/56 (7%)
Frame = -3
Query: 424 IRRNEKIAVHCTVRGAKAEEILER---GLKVREY-ELRRDNFSATGNFGFGIQEHI 269
+ RN+ +A+HC +G I+ + G K EY ELR ++ + G + +H+
Sbjct: 717 VERNKHVALHCQAQGVPTPTIVWKKATGSKSGEYEELRERAYTKILSNGTLLLQHV 772
>DQ071552-1|AAY82248.1| 495|Apis mellifera anarchy 1 protein.
Length = 495
Score = 22.6 bits (46), Expect = 3.6
Identities = 12/47 (25%), Positives = 23/47 (48%)
Frame = -1
Query: 525 ESGDRLLVPPRCWSNSQDNSLYFPRLGIQCGLLVSVVMKRLLSIVQS 385
+ G L + + + SL+ LGI+CG + +++ L I Q+
Sbjct: 443 DDGGPLSLKNKVETTHSGTSLFRINLGIECGYEIKKLLRYKLLISQN 489
>AY921573-1|AAX62923.1| 694|Apis mellifera D2-like dopamine
receptor protein.
Length = 694
Score = 22.6 bits (46), Expect = 3.6
Identities = 9/15 (60%), Positives = 11/15 (73%)
Frame = +2
Query: 497 GGTSSLSPDSPTHMF 541
GG+SS SP SP+ F
Sbjct: 86 GGSSSPSPSSPSSFF 100
>AB267886-1|BAF46356.1| 567|Apis mellifera ecdysteroid receptor A
isoform protein.
Length = 567
Score = 22.6 bits (46), Expect = 3.6
Identities = 9/22 (40%), Positives = 14/22 (63%)
Frame = +2
Query: 467 LLSCELLQHLGGTSSLSPDSPT 532
L+ E +HL GTS+ + +PT
Sbjct: 32 LVKAETPEHLAGTSTTAAATPT 53
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 22.2 bits (45), Expect = 4.7
Identities = 11/30 (36%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
Frame = -1
Query: 540 NICVGESGDRLLVPPRCWSNS-QDNSLYFP 454
N+ + +GD L VPP + +S + YFP
Sbjct: 130 NVLIYPNGDVLWVPPAIYQSSCTIDVTYFP 159
>AF388659-3|AAK71993.1| 548|Apis mellifera
1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
Length = 548
Score = 22.2 bits (45), Expect = 4.7
Identities = 10/32 (31%), Positives = 17/32 (53%)
Frame = -3
Query: 373 AEEILERGLKVREYELRRDNFSATGNFGFGIQ 278
AEE +G+ Y + R+ S+T GF ++
Sbjct: 386 AEERRVQGVTKPRYMVWRETISSTATLGFRVE 417
>AF388659-2|AAK71994.1| 463|Apis mellifera
1D-myo-inositol-trisphosphate 3-kinaseisoform B protein.
Length = 463
Score = 22.2 bits (45), Expect = 4.7
Identities = 10/32 (31%), Positives = 17/32 (53%)
Frame = -3
Query: 373 AEEILERGLKVREYELRRDNFSATGNFGFGIQ 278
AEE +G+ Y + R+ S+T GF ++
Sbjct: 301 AEERRVQGVTKPRYMVWRETISSTATLGFRVE 332
>AF388659-1|AAK71995.1| 782|Apis mellifera
1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
Length = 782
Score = 22.2 bits (45), Expect = 4.7
Identities = 10/32 (31%), Positives = 17/32 (53%)
Frame = -3
Query: 373 AEEILERGLKVREYELRRDNFSATGNFGFGIQ 278
AEE +G+ Y + R+ S+T GF ++
Sbjct: 620 AEERRVQGVTKPRYMVWRETISSTATLGFRVE 651
>AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 21.8 bits (44), Expect = 6.2
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = -1
Query: 327 CGVTTSPPRVILASVFKN 274
C + PPRVIL+S K+
Sbjct: 626 CNLGLEPPRVILSSGAKS 643
>AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 21.8 bits (44), Expect = 6.2
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = -1
Query: 327 CGVTTSPPRVILASVFKN 274
C + PPRVIL+S K+
Sbjct: 626 CNLGLEPPRVILSSGAKS 643
>AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 21.8 bits (44), Expect = 6.2
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = -1
Query: 327 CGVTTSPPRVILASVFKN 274
C + PPRVIL+S K+
Sbjct: 626 CNLGLEPPRVILSSGAKS 643
>AJ968562-1|CAI91546.1| 998|Apis mellifera protein ( Apis mellifera
ORF for hypotheticalprotein. ).
Length = 998
Score = 21.4 bits (43), Expect = 8.2
Identities = 9/13 (69%), Positives = 9/13 (69%)
Frame = -2
Query: 191 NVAHRRRKTGKVG 153
NVA R TGKVG
Sbjct: 923 NVASRMESTGKVG 935
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 176,494
Number of Sequences: 438
Number of extensions: 3981
Number of successful extensions: 19
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20708550
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -