Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= psV30427.Seq
         (874 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY113254-1|AAM29259.1|  322|Drosophila melanogaster AT14373p pro...   115   7e-26
AE014297-3840|AAN14062.1|  322|Drosophila melanogaster CG4774-PC...   115   7e-26
AE014297-3839|AAF56497.2|  322|Drosophila melanogaster CG4774-PB...   115   7e-26
AE014297-3838|AAF56496.2|  322|Drosophila melanogaster CG4774-PA...   115   7e-26

>AY113254-1|AAM29259.1|  322|Drosophila melanogaster AT14373p
           protein.
          Length = 322

 Score =  115 bits (277), Expect = 7e-26
 Identities = 50/84 (59%), Positives = 66/84 (78%)
 Frame = -2

Query: 507 WQDLIPISLTLLIVGRDIALVVAGFVIRYISLPPPRTLSRYFDVTHATAQLAPTFISKVN 328
           + DL+P+ L  ++V RD+ L+ AGFVIRYISLPPP+T SRYFD TH TAQL PT +SK+N
Sbjct: 205 YTDLLPMWLMGIVVFRDVFLLGAGFVIRYISLPPPKTFSRYFDATHVTAQLEPTLLSKIN 264

Query: 327 TAVQLLLVGTTLASPVFGYVDHPA 256
           T VQL  +G +L +P++ Y+DHPA
Sbjct: 265 TGVQLATIGLSLGAPIWNYLDHPA 288



 Score = 77.4 bits (182), Expect = 2e-14
 Identities = 35/55 (63%), Positives = 43/55 (78%)
 Frame = -3

Query: 674 QNNYNLALGLLVFAGITDLLDGWIARNWKGQSTKMGSFLDPMADKVLVATLFISL 510
           Q ++ L + LL FAGITDLLDG IAR W  Q++K GSFLDPMADK+L+ +L ISL
Sbjct: 149 QGDFTLGMSLLAFAGITDLLDGQIARRWPSQASKFGSFLDPMADKLLMGSLVISL 203


>AE014297-3840|AAN14062.1|  322|Drosophila melanogaster CG4774-PC,
           isoform C protein.
          Length = 322

 Score =  115 bits (277), Expect = 7e-26
 Identities = 50/84 (59%), Positives = 66/84 (78%)
 Frame = -2

Query: 507 WQDLIPISLTLLIVGRDIALVVAGFVIRYISLPPPRTLSRYFDVTHATAQLAPTFISKVN 328
           + DL+P+ L  ++V RD+ L+ AGFVIRYISLPPP+T SRYFD TH TAQL PT +SK+N
Sbjct: 205 YTDLLPMWLMGIVVFRDVFLLGAGFVIRYISLPPPKTFSRYFDATHVTAQLEPTLLSKIN 264

Query: 327 TAVQLLLVGTTLASPVFGYVDHPA 256
           T VQL  +G +L +P++ Y+DHPA
Sbjct: 265 TGVQLATIGLSLGAPIWNYLDHPA 288



 Score = 77.4 bits (182), Expect = 2e-14
 Identities = 35/55 (63%), Positives = 43/55 (78%)
 Frame = -3

Query: 674 QNNYNLALGLLVFAGITDLLDGWIARNWKGQSTKMGSFLDPMADKVLVATLFISL 510
           Q ++ L + LL FAGITDLLDG IAR W  Q++K GSFLDPMADK+L+ +L ISL
Sbjct: 149 QGDFTLGMSLLAFAGITDLLDGQIARRWPSQASKFGSFLDPMADKLLMGSLVISL 203


>AE014297-3839|AAF56497.2|  322|Drosophila melanogaster CG4774-PB,
           isoform B protein.
          Length = 322

 Score =  115 bits (277), Expect = 7e-26
 Identities = 50/84 (59%), Positives = 66/84 (78%)
 Frame = -2

Query: 507 WQDLIPISLTLLIVGRDIALVVAGFVIRYISLPPPRTLSRYFDVTHATAQLAPTFISKVN 328
           + DL+P+ L  ++V RD+ L+ AGFVIRYISLPPP+T SRYFD TH TAQL PT +SK+N
Sbjct: 205 YTDLLPMWLMGIVVFRDVFLLGAGFVIRYISLPPPKTFSRYFDATHVTAQLEPTLLSKIN 264

Query: 327 TAVQLLLVGTTLASPVFGYVDHPA 256
           T VQL  +G +L +P++ Y+DHPA
Sbjct: 265 TGVQLATIGLSLGAPIWNYLDHPA 288



 Score = 77.4 bits (182), Expect = 2e-14
 Identities = 35/55 (63%), Positives = 43/55 (78%)
 Frame = -3

Query: 674 QNNYNLALGLLVFAGITDLLDGWIARNWKGQSTKMGSFLDPMADKVLVATLFISL 510
           Q ++ L + LL FAGITDLLDG IAR W  Q++K GSFLDPMADK+L+ +L ISL
Sbjct: 149 QGDFTLGMSLLAFAGITDLLDGQIARRWPSQASKFGSFLDPMADKLLMGSLVISL 203


>AE014297-3838|AAF56496.2|  322|Drosophila melanogaster CG4774-PA,
           isoform A protein.
          Length = 322

 Score =  115 bits (277), Expect = 7e-26
 Identities = 50/84 (59%), Positives = 66/84 (78%)
 Frame = -2

Query: 507 WQDLIPISLTLLIVGRDIALVVAGFVIRYISLPPPRTLSRYFDVTHATAQLAPTFISKVN 328
           + DL+P+ L  ++V RD+ L+ AGFVIRYISLPPP+T SRYFD TH TAQL PT +SK+N
Sbjct: 205 YTDLLPMWLMGIVVFRDVFLLGAGFVIRYISLPPPKTFSRYFDATHVTAQLEPTLLSKIN 264

Query: 327 TAVQLLLVGTTLASPVFGYVDHPA 256
           T VQL  +G +L +P++ Y+DHPA
Sbjct: 265 TGVQLATIGLSLGAPIWNYLDHPA 288



 Score = 77.4 bits (182), Expect = 2e-14
 Identities = 35/55 (63%), Positives = 43/55 (78%)
 Frame = -3

Query: 674 QNNYNLALGLLVFAGITDLLDGWIARNWKGQSTKMGSFLDPMADKVLVATLFISL 510
           Q ++ L + LL FAGITDLLDG IAR W  Q++K GSFLDPMADK+L+ +L ISL
Sbjct: 149 QGDFTLGMSLLAFAGITDLLDGQIARRWPSQASKFGSFLDPMADKLLMGSLVISL 203


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 35,324,201
Number of Sequences: 53049
Number of extensions: 727206
Number of successful extensions: 1296
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1256
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1296
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4229643912
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)