Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= psV30426.Seq
         (742 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M17887-1|AAA36472.1|  115|Homo sapiens protein ( Human acidic ri...    64   4e-10
CR542248-1|CAG47044.1|  115|Homo sapiens RPLP2 protein.                64   4e-10
CR542212-1|CAG47008.1|  115|Homo sapiens RPLP2 protein.                64   4e-10
BC062314-1|AAH62314.1|  115|Homo sapiens ribosomal protein, larg...    64   4e-10
BC007573-1|AAH07573.1|  115|Homo sapiens ribosomal protein, larg...    64   4e-10
BC005920-1|AAH05920.1|  115|Homo sapiens ribosomal protein, larg...    64   4e-10
BC005354-1|AAH05354.1|  115|Homo sapiens ribosomal protein, larg...    64   4e-10
AB061837-1|BAB79475.1|  115|Homo sapiens ribosomal protein P2 pr...    64   4e-10
AF414442-1|AAL65133.2|22152|Homo sapiens ovarian cancer related ...    31   4.3  
AF361486-1|AAK74120.3| 6995|Homo sapiens mucin 16 protein.             31   4.3  

>M17887-1|AAA36472.1|  115|Homo sapiens protein ( Human acidic
           ribosomal phosphoprotein P2 mRNA, complete cds. ).
          Length = 115

 Score = 64.5 bits (150), Expect = 4e-10
 Identities = 30/57 (52%), Positives = 41/57 (71%)
 Frame = -2

Query: 438 GWQDHATAADVEKILSSVGIXTDAEKLKKVITELNGKDVEQLIAAGREKLSSMPVGG 268
           G     +A D++KIL SVGI  D ++L KVI+ELNGK++E +IA G  KL+S+P GG
Sbjct: 13  GGNSSPSAKDIKKILDSVGIEADDDRLNKVISELNGKNIEDVIAQGIGKLASVPAGG 69


>CR542248-1|CAG47044.1|  115|Homo sapiens RPLP2 protein.
          Length = 115

 Score = 64.5 bits (150), Expect = 4e-10
 Identities = 30/57 (52%), Positives = 41/57 (71%)
 Frame = -2

Query: 438 GWQDHATAADVEKILSSVGIXTDAEKLKKVITELNGKDVEQLIAAGREKLSSMPVGG 268
           G     +A D++KIL SVGI  D ++L KVI+ELNGK++E +IA G  KL+S+P GG
Sbjct: 13  GGNSSPSAKDIKKILDSVGIEADDDRLNKVISELNGKNIEDVIAQGIGKLASVPAGG 69


>CR542212-1|CAG47008.1|  115|Homo sapiens RPLP2 protein.
          Length = 115

 Score = 64.5 bits (150), Expect = 4e-10
 Identities = 30/57 (52%), Positives = 41/57 (71%)
 Frame = -2

Query: 438 GWQDHATAADVEKILSSVGIXTDAEKLKKVITELNGKDVEQLIAAGREKLSSMPVGG 268
           G     +A D++KIL SVGI  D ++L KVI+ELNGK++E +IA G  KL+S+P GG
Sbjct: 13  GGNSSPSAKDIKKILDSVGIEADDDRLNKVISELNGKNIEDVIAQGIGKLASVPAGG 69


>BC062314-1|AAH62314.1|  115|Homo sapiens ribosomal protein, large,
           P2 protein.
          Length = 115

 Score = 64.5 bits (150), Expect = 4e-10
 Identities = 30/57 (52%), Positives = 41/57 (71%)
 Frame = -2

Query: 438 GWQDHATAADVEKILSSVGIXTDAEKLKKVITELNGKDVEQLIAAGREKLSSMPVGG 268
           G     +A D++KIL SVGI  D ++L KVI+ELNGK++E +IA G  KL+S+P GG
Sbjct: 13  GGNSSPSAKDIKKILDSVGIEADDDRLNKVISELNGKNIEDVIAQGIGKLASVPAGG 69


>BC007573-1|AAH07573.1|  115|Homo sapiens ribosomal protein, large,
           P2 protein.
          Length = 115

 Score = 64.5 bits (150), Expect = 4e-10
 Identities = 30/57 (52%), Positives = 41/57 (71%)
 Frame = -2

Query: 438 GWQDHATAADVEKILSSVGIXTDAEKLKKVITELNGKDVEQLIAAGREKLSSMPVGG 268
           G     +A D++KIL SVGI  D ++L KVI+ELNGK++E +IA G  KL+S+P GG
Sbjct: 13  GGNSSPSAKDIKKILDSVGIEADDDRLNKVISELNGKNIEDVIAQGIGKLASVPAGG 69


>BC005920-1|AAH05920.1|  115|Homo sapiens ribosomal protein, large,
           P2 protein.
          Length = 115

 Score = 64.5 bits (150), Expect = 4e-10
 Identities = 30/57 (52%), Positives = 41/57 (71%)
 Frame = -2

Query: 438 GWQDHATAADVEKILSSVGIXTDAEKLKKVITELNGKDVEQLIAAGREKLSSMPVGG 268
           G     +A D++KIL SVGI  D ++L KVI+ELNGK++E +IA G  KL+S+P GG
Sbjct: 13  GGNSSPSAKDIKKILDSVGIEADDDRLNKVISELNGKNIEDVIAQGIGKLASVPAGG 69


>BC005354-1|AAH05354.1|  115|Homo sapiens ribosomal protein, large,
           P2 protein.
          Length = 115

 Score = 64.5 bits (150), Expect = 4e-10
 Identities = 30/57 (52%), Positives = 41/57 (71%)
 Frame = -2

Query: 438 GWQDHATAADVEKILSSVGIXTDAEKLKKVITELNGKDVEQLIAAGREKLSSMPVGG 268
           G     +A D++KIL SVGI  D ++L KVI+ELNGK++E +IA G  KL+S+P GG
Sbjct: 13  GGNSSPSAKDIKKILDSVGIEADDDRLNKVISELNGKNIEDVIAQGIGKLASVPAGG 69


>AB061837-1|BAB79475.1|  115|Homo sapiens ribosomal protein P2
           protein.
          Length = 115

 Score = 64.5 bits (150), Expect = 4e-10
 Identities = 30/57 (52%), Positives = 41/57 (71%)
 Frame = -2

Query: 438 GWQDHATAADVEKILSSVGIXTDAEKLKKVITELNGKDVEQLIAAGREKLSSMPVGG 268
           G     +A D++KIL SVGI  D ++L KVI+ELNGK++E +IA G  KL+S+P GG
Sbjct: 13  GGNSSPSAKDIKKILDSVGIEADDDRLNKVISELNGKNIEDVIAQGIGKLASVPAGG 69


>AF414442-1|AAL65133.2|22152|Homo sapiens ovarian cancer related tumor
             marker CA125 protein.
          Length = 22152

 Score = 31.1 bits (67), Expect = 4.3
 Identities = 20/64 (31%), Positives = 27/64 (42%), Gaps = 1/64 (1%)
 Frame = +2

Query: 278   GIDDSFSRPAAISCSTSLPLSSVITFLSFSASVXIPTELRI-FSTSAAVAWSCHPAQPVN 454
             G D S + P  IS S    L+ ++T      S   PT  +    T     W  HPA+  +
Sbjct: 10635 GADVSSAIPTNISPSELDALTPLVTISGTDTSTTFPTLTKSPHETETRTTWLTHPAETSS 10694

Query: 455   TRPR 466
             T PR
Sbjct: 10695 TIPR 10698


>AF361486-1|AAK74120.3| 6995|Homo sapiens mucin 16 protein.
          Length = 6995

 Score = 31.1 bits (67), Expect = 4.3
 Identities = 20/64 (31%), Positives = 27/64 (42%), Gaps = 1/64 (1%)
 Frame = +2

Query: 278  GIDDSFSRPAAISCSTSLPLSSVITFLSFSASVXIPTELRI-FSTSAAVAWSCHPAQPVN 454
            G D S + P  IS S    L+ ++T      S   PT  +    T     W  HPA+  +
Sbjct: 2339 GADVSSAIPTNISPSELDALTPLVTISGTDTSTTFPTLTKSPHETETRTTWLTHPAETSS 2398

Query: 455  TRPR 466
            T PR
Sbjct: 2399 TIPR 2402


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 79,244,284
Number of Sequences: 237096
Number of extensions: 1279413
Number of successful extensions: 1977
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1910
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1977
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8847149012
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)