Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= psV30426.Seq
(742 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X05016-1|CAA28672.1| 113|Drosophila melanogaster r-protein prot... 77 3e-14
AE013599-2313|AAS64838.1| 113|Drosophila melanogaster CG4918-PB... 77 3e-14
AE013599-2312|AAF57979.1| 113|Drosophila melanogaster CG4918-PA... 77 3e-14
X05466-1|CAA29026.1| 113|Drosophila melanogaster r ribosomal pr... 77 3e-14
AY119253-1|AAM51113.1| 113|Drosophila melanogaster SD22208p pro... 77 3e-14
AY118769-1|AAM50629.1| 414|Drosophila melanogaster GH11066p pro... 29 8.8
AE014297-3783|AAF56455.2| 414|Drosophila melanogaster CG10560-P... 29 8.8
>X05016-1|CAA28672.1| 113|Drosophila melanogaster r-protein
protein.
Length = 113
Score = 77.0 bits (181), Expect = 3e-14
Identities = 37/58 (63%), Positives = 44/58 (75%)
Frame = -2
Query: 438 GWQDHATAADVEKILSSVGIXTDAEKLKKVITELNGKDVEQLIAAGREKLSSMPVGGG 265
G +D +D+EKILSSVG+ DAE+L KVI EL GK ++ LI GREKLSSMPVGGG
Sbjct: 13 GGKDSPANSDLEKILSSVGVEVDAERLTKVIKELAGKSIDDLIKEGREKLSSMPVGGG 70
Score = 33.5 bits (73), Expect = 0.31
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = -3
Query: 473 MRYVAAYLLAVLGGK 429
MRYVAAYLLAVLGGK
Sbjct: 1 MRYVAAYLLAVLGGK 15
>AE013599-2313|AAS64838.1| 113|Drosophila melanogaster CG4918-PB,
isoform B protein.
Length = 113
Score = 77.0 bits (181), Expect = 3e-14
Identities = 37/58 (63%), Positives = 44/58 (75%)
Frame = -2
Query: 438 GWQDHATAADVEKILSSVGIXTDAEKLKKVITELNGKDVEQLIAAGREKLSSMPVGGG 265
G +D +D+EKILSSVG+ DAE+L KVI EL GK ++ LI GREKLSSMPVGGG
Sbjct: 13 GGKDSPANSDLEKILSSVGVEVDAERLTKVIKELAGKSIDDLIKEGREKLSSMPVGGG 70
Score = 33.5 bits (73), Expect = 0.31
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = -3
Query: 473 MRYVAAYLLAVLGGK 429
MRYVAAYLLAVLGGK
Sbjct: 1 MRYVAAYLLAVLGGK 15
>AE013599-2312|AAF57979.1| 113|Drosophila melanogaster CG4918-PA,
isoform A protein.
Length = 113
Score = 77.0 bits (181), Expect = 3e-14
Identities = 37/58 (63%), Positives = 44/58 (75%)
Frame = -2
Query: 438 GWQDHATAADVEKILSSVGIXTDAEKLKKVITELNGKDVEQLIAAGREKLSSMPVGGG 265
G +D +D+EKILSSVG+ DAE+L KVI EL GK ++ LI GREKLSSMPVGGG
Sbjct: 13 GGKDSPANSDLEKILSSVGVEVDAERLTKVIKELAGKSIDDLIKEGREKLSSMPVGGG 70
Score = 33.5 bits (73), Expect = 0.31
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = -3
Query: 473 MRYVAAYLLAVLGGK 429
MRYVAAYLLAVLGGK
Sbjct: 1 MRYVAAYLLAVLGGK 15
>X05466-1|CAA29026.1| 113|Drosophila melanogaster r ribosomal
protein protein.
Length = 113
Score = 76.6 bits (180), Expect = 3e-14
Identities = 37/58 (63%), Positives = 43/58 (74%)
Frame = -2
Query: 438 GWQDHATAADVEKILSSVGIXTDAEKLKKVITELNGKDVEQLIAAGREKLSSMPVGGG 265
G +D D+EKILSSVG+ DAE+L KVI EL GK ++ LI GREKLSSMPVGGG
Sbjct: 13 GGKDSPANGDLEKILSSVGVEVDAERLTKVIKELAGKSIDDLIKEGREKLSSMPVGGG 70
Score = 33.5 bits (73), Expect = 0.31
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = -3
Query: 473 MRYVAAYLLAVLGGK 429
MRYVAAYLLAVLGGK
Sbjct: 1 MRYVAAYLLAVLGGK 15
>AY119253-1|AAM51113.1| 113|Drosophila melanogaster SD22208p
protein.
Length = 113
Score = 76.6 bits (180), Expect = 3e-14
Identities = 37/58 (63%), Positives = 43/58 (74%)
Frame = -2
Query: 438 GWQDHATAADVEKILSSVGIXTDAEKLKKVITELNGKDVEQLIAAGREKLSSMPVGGG 265
G +D D+EKILSSVG+ DAE+L KVI EL GK ++ LI GREKLSSMPVGGG
Sbjct: 13 GGKDSPANGDLEKILSSVGVEVDAERLTKVIKELAGKSIDDLIKEGREKLSSMPVGGG 70
Score = 33.5 bits (73), Expect = 0.31
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = -3
Query: 473 MRYVAAYLLAVLGGK 429
MRYVAAYLLAVLGGK
Sbjct: 1 MRYVAAYLLAVLGGK 15
>AY118769-1|AAM50629.1| 414|Drosophila melanogaster GH11066p
protein.
Length = 414
Score = 28.7 bits (61), Expect = 8.8
Identities = 14/46 (30%), Positives = 25/46 (54%), Gaps = 5/46 (10%)
Frame = +2
Query: 551 YGXWFNRTKIINHLKMVNF-----TVDEIRXDDXTRSGXSATCSVN 673
Y WF ++++ HLK++N+ T+ IR SG + CS++
Sbjct: 315 YFVWFYHSELVKHLKLLNYSKKLPTLRSIRNALNKYSGWAFICSIS 360
>AE014297-3783|AAF56455.2| 414|Drosophila melanogaster CG10560-PA
protein.
Length = 414
Score = 28.7 bits (61), Expect = 8.8
Identities = 14/46 (30%), Positives = 25/46 (54%), Gaps = 5/46 (10%)
Frame = +2
Query: 551 YGXWFNRTKIINHLKMVNF-----TVDEIRXDDXTRSGXSATCSVN 673
Y WF ++++ HLK++N+ T+ IR SG + CS++
Sbjct: 315 YFVWFYHSELVKHLKLLNYSKKLPTLRSIRNALNKYSGWAFICSIS 360
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,411,864
Number of Sequences: 53049
Number of extensions: 399907
Number of successful extensions: 732
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 722
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 732
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3355404063
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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