Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= psV30426.Seq
         (742 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U97194-7|AAB52450.2|  107|Caenorhabditis elegans Hypothetical pr...    54   8e-08
AL132865-1|CAB60595.1|  110|Caenorhabditis elegans Hypothetical ...    50   1e-06
Z93393-9|CAB07695.1|  190|Caenorhabditis elegans Hypothetical pr...    30   2.0  
Z75545-6|CAA99888.3|  649|Caenorhabditis elegans Hypothetical pr...    30   2.0  
AL008986-2|CAA15621.3|  649|Caenorhabditis elegans Hypothetical ...    30   2.0  
U53153-9|AAC69041.1|  511|Caenorhabditis elegans Hypothetical pr...    29   4.6  

>U97194-7|AAB52450.2|  107|Caenorhabditis elegans Hypothetical
           protein C37A2.7 protein.
          Length = 107

 Score = 54.4 bits (125), Expect = 8e-08
 Identities = 27/69 (39%), Positives = 37/69 (53%)
 Frame = -2

Query: 462 GRVFTGCAGWQDHATAADVEKILSSVGIXTDAEKLKKVITELNGKDVEQLIAAGREKLSS 283
           G       G     +A DV K+L + G+  D E    V+  L GK + ++IA G+ KLSS
Sbjct: 5   GAYLLATLGGNASPSAQDVLKVLEAGGLDCDMENANSVVDALKGKTISEVIAQGKVKLSS 64

Query: 282 MPVGGGAPA 256
           +P GG APA
Sbjct: 65  VPSGGSAPA 73


>AL132865-1|CAB60595.1|  110|Caenorhabditis elegans Hypothetical
           protein Y62E10A.1 protein.
          Length = 110

 Score = 50.4 bits (115), Expect = 1e-06
 Identities = 27/52 (51%), Positives = 35/52 (67%)
 Frame = -2

Query: 411 DVEKILSSVGIXTDAEKLKKVITELNGKDVEQLIAAGREKLSSMPVGGGAPA 256
           D++ ILS+VG+  DAE  K V++ L GK VE+LIA G   L S+  GG APA
Sbjct: 22  DLKNILSAVGVDADAETAKLVVSRLAGKTVEELIAEGSAGLVSVS-GGAAPA 72



 Score = 30.3 bits (65), Expect = 1.5
 Identities = 13/14 (92%), Positives = 14/14 (100%)
 Frame = -3

Query: 473 MRYVAAYLLAVLGG 432
           MRYV+AYLLAVLGG
Sbjct: 1   MRYVSAYLLAVLGG 14


>Z93393-9|CAB07695.1|  190|Caenorhabditis elegans Hypothetical
           protein Y48E1B.11 protein.
          Length = 190

 Score = 29.9 bits (64), Expect = 2.0
 Identities = 14/34 (41%), Positives = 20/34 (58%)
 Frame = -1

Query: 583 YDFCSIKPXTIRQQWRFVQDERYSFALHVSCQLG 482
           Y F  IK  T R+ W F  D++Y+F +  + QLG
Sbjct: 37  YHFNCIKIDTTREDWHFSIDKKYNFNIQ-TAQLG 69


>Z75545-6|CAA99888.3|  649|Caenorhabditis elegans Hypothetical
           protein H37N21.1 protein.
          Length = 649

 Score = 29.9 bits (64), Expect = 2.0
 Identities = 18/55 (32%), Positives = 25/55 (45%)
 Frame = -2

Query: 417 AADVEKILSSVGIXTDAEKLKKVITELNGKDVEQLIAAGREKLSSMPVGGGAPAG 253
           +A  E +   +G  T  E   KV  E+NG +V    + GR+  S  P   G P G
Sbjct: 458 SASPEAVDKKIGEVTSTESTSKVEVEVNGANVTIGSSNGRDAGSPTPEEEGEPNG 512


>AL008986-2|CAA15621.3|  649|Caenorhabditis elegans Hypothetical
           protein H37N21.1 protein.
          Length = 649

 Score = 29.9 bits (64), Expect = 2.0
 Identities = 18/55 (32%), Positives = 25/55 (45%)
 Frame = -2

Query: 417 AADVEKILSSVGIXTDAEKLKKVITELNGKDVEQLIAAGREKLSSMPVGGGAPAG 253
           +A  E +   +G  T  E   KV  E+NG +V    + GR+  S  P   G P G
Sbjct: 458 SASPEAVDKKIGEVTSTESTSKVEVEVNGANVTIGSSNGRDAGSPTPEEEGEPNG 512


>U53153-9|AAC69041.1|  511|Caenorhabditis elegans Hypothetical
           protein T19A5.5 protein.
          Length = 511

 Score = 28.7 bits (61), Expect = 4.6
 Identities = 12/29 (41%), Positives = 13/29 (44%)
 Frame = -1

Query: 502 HVSCQLGLKKCVTWPRIYWLCWVARPRXC 416
           H  CQ G  +CV  PR  W C   R   C
Sbjct: 55  HFKCQTGQNQCVPDPRGRWNCKKCRTDRC 83


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,318,593
Number of Sequences: 27780
Number of extensions: 204523
Number of successful extensions: 413
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 409
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 413
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1745954468
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)