Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= psV30419.Seq
         (894 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein p...    33   0.009
M93690-1|AAA29364.1|  613|Anopheles gambiae ORF1 protein.              26   1.3  
M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles ...    25   3.1  
AJ001042-1|CAA04496.1|  395|Anopheles gambiae putative gram nega...    25   3.1  
AF081533-1|AAD29854.1|  395|Anopheles gambiae putative gram nega...    25   3.1  
AJ441131-1|CAD29630.1|  567|Anopheles gambiae putative chitin bi...    25   4.1  
AJ439060-17|CAD27768.1|  568|Anopheles gambiae putative chitin b...    25   4.1  
DQ342048-1|ABC69940.1|  847|Anopheles gambiae STIP protein.            24   5.4  
AY578810-1|AAT07315.1|  897|Anopheles gambiae smurf protein.           24   7.2  
AY280612-1|AAQ21365.1|  309|Anopheles gambiae carbonic anhydrase...    23   9.5  
AJ000502-1|CAA04136.1|  299|Anopheles gambiae iron regulatory pr...    23   9.5  
AB090822-1|BAC57919.1|  468|Anopheles gambiae gag-like protein p...    23   9.5  

>AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein
           protein.
          Length = 724

 Score = 33.5 bits (73), Expect = 0.009
 Identities = 28/112 (25%), Positives = 50/112 (44%), Gaps = 2/112 (1%)
 Frame = +2

Query: 320 RQRSILL*PRTKDRSGPLGQLLSGHQKRSQRAQKQ*LRQRTDQRIHQEQP*ARTVSDPGD 499
           R+R   L  R ++R     Q     Q++ Q+ Q+Q  +Q+  Q+  Q+QP  + +  P  
Sbjct: 173 RKRQQRLRRRERERQQQQQQQQQQQQQQQQQQQQQRQQQQQCQQQRQQQPQQQQLQQPQQ 232

Query: 500 QRWS--VHASPARELSRDTPDYQYGRFDASALHIAHALKQTELQKAYHRPRE 649
           Q W+  V   P++   R     Q  +      ++   L+Q   Q+   RPR+
Sbjct: 233 QLWTTVVRGRPSQR-HRQPQQQQQQQQQQGERYVPPQLRQQRQQQ--QRPRQ 281



 Score = 23.4 bits (48), Expect = 9.5
 Identities = 22/114 (19%), Positives = 47/114 (41%), Gaps = 6/114 (5%)
 Frame = +2

Query: 395 QKRSQRAQKQ*LRQRTDQRIHQEQP*ARTVSDPGDQRWSVHASPARELSRDTPDYQYGRF 574
           Q+R Q+ Q+Q  +Q+  Q+  Q+Q   +       Q+W       ++  +  P  +  + 
Sbjct: 334 QQRQQQQQQQ--QQQRQQQQRQQQQQQQQQHQQQQQQWQQQQQQQQQPRQSLPHRKQTQL 391

Query: 575 DAS-ALHIAHALKQTELQKAYHRPRENL-----LDCYLDRDEQTKLEMKHRQEE 718
             S  L      +Q   Q+   +P++ L       C   R  Q + + + +Q++
Sbjct: 392 QLSPRLQQQQQQQQQSQQQQQQQPQQLLWTTVVRSCPSQRQRQLQQQQQQQQQQ 445


>M93690-1|AAA29364.1|  613|Anopheles gambiae ORF1 protein.
          Length = 613

 Score = 26.2 bits (55), Expect = 1.3
 Identities = 14/54 (25%), Positives = 25/54 (46%)
 Frame = +2

Query: 395 QKRSQRAQKQ*LRQRTDQRIHQEQP*ARTVSDPGDQRWSVHASPARELSRDTPD 556
           Q+++ R Q   +RQ+  Q+  Q QP    V+    Q+   H    ++  R  P+
Sbjct: 333 QQQTGRYQPPQMRQQLQQQQQQRQPQRYVVAGSSQQQQQQHQQQQQKRKRPKPE 386



 Score = 24.2 bits (50), Expect = 5.4
 Identities = 10/25 (40%), Positives = 17/25 (68%)
 Frame = +2

Query: 392 HQKRSQRAQKQ*LRQRTDQRIHQEQ 466
           HQ+R Q+ Q+Q  +Q+  Q+  Q+Q
Sbjct: 229 HQQREQQQQQQQQQQQQQQQQQQQQ 253


>M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles
           gambiae RT2 retroposon. ).
          Length = 1222

 Score = 25.0 bits (52), Expect = 3.1
 Identities = 10/33 (30%), Positives = 20/33 (60%)
 Frame = +2

Query: 368 PLGQLLSGHQKRSQRAQKQ*LRQRTDQRIHQEQ 466
           P  + L  HQ+ +Q++ +Q  +Q+  Q + Q+Q
Sbjct: 223 PSPEQLQNHQQTAQQSSQQQQQQQQQQSLQQQQ 255


>AJ001042-1|CAA04496.1|  395|Anopheles gambiae putative gram
           negative bacteria bindingprotein protein.
          Length = 395

 Score = 25.0 bits (52), Expect = 3.1
 Identities = 15/45 (33%), Positives = 22/45 (48%)
 Frame = +1

Query: 340 LATYQRSVRATWTTPQWASEALSTCPKAITTSTNRSEDTSGTAMS 474
           LAT    V A + +   AS A S C +++TT++    D   T  S
Sbjct: 15  LATVGDWVEAVYESTSTASTAQSECVRSVTTASGSLIDRGRTFCS 59


>AF081533-1|AAD29854.1|  395|Anopheles gambiae putative gram
           negative bacteria bindingprotein protein.
          Length = 395

 Score = 25.0 bits (52), Expect = 3.1
 Identities = 15/45 (33%), Positives = 22/45 (48%)
 Frame = +1

Query: 340 LATYQRSVRATWTTPQWASEALSTCPKAITTSTNRSEDTSGTAMS 474
           LAT    V A + +   AS A S C +++TT++    D   T  S
Sbjct: 15  LATVGDWVEAVYESTSTASTAQSECVRSVTTASGSLIDRGRTFCS 59


>AJ441131-1|CAD29630.1|  567|Anopheles gambiae putative chitin
           binding protein protein.
          Length = 567

 Score = 24.6 bits (51), Expect = 4.1
 Identities = 12/32 (37%), Positives = 17/32 (53%)
 Frame = +2

Query: 524 PARELSRDTPDYQYGRFDASALHIAHALKQTE 619
           P R + + TP+ +  RFD S L    ALK  +
Sbjct: 121 PFRPIPKPTPEAEPVRFDPSVLRRNFALKTAQ 152


>AJ439060-17|CAD27768.1|  568|Anopheles gambiae putative chitin
           binding protein protein.
          Length = 568

 Score = 24.6 bits (51), Expect = 4.1
 Identities = 12/32 (37%), Positives = 17/32 (53%)
 Frame = +2

Query: 524 PARELSRDTPDYQYGRFDASALHIAHALKQTE 619
           P R + + TP+ +  RFD S L    ALK  +
Sbjct: 126 PFRPIPKPTPEAEPVRFDPSVLRRNFALKTAQ 157


>DQ342048-1|ABC69940.1|  847|Anopheles gambiae STIP protein.
          Length = 847

 Score = 24.2 bits (50), Expect = 5.4
 Identities = 11/35 (31%), Positives = 20/35 (57%)
 Frame = +2

Query: 317 GRQRSILL*PRTKDRSGPLGQLLSGHQKRSQRAQK 421
           GR+R  +   + KD S P+G +  G Q+  ++ +K
Sbjct: 54  GRRRGRMGGKQPKDYSAPIGFIAGGIQQSGKKPEK 88


>AY578810-1|AAT07315.1|  897|Anopheles gambiae smurf protein.
          Length = 897

 Score = 23.8 bits (49), Expect = 7.2
 Identities = 11/22 (50%), Positives = 12/22 (54%)
 Frame = -3

Query: 829 EPAGQPXXIRGPNRSGNSFTXL 764
           EPAG P    G N + NS T L
Sbjct: 194 EPAGPPVRQSGNNNAANSSTPL 215


>AY280612-1|AAQ21365.1|  309|Anopheles gambiae carbonic anhydrase
           protein.
          Length = 309

 Score = 23.4 bits (48), Expect = 9.5
 Identities = 10/25 (40%), Positives = 16/25 (64%)
 Frame = -1

Query: 150 SVHFVNDLCSRHNYKLHLIHIDANY 76
           S H ++D  +R+  +LHL+H D  Y
Sbjct: 120 SEHTLDD--TRYGLELHLVHHDTRY 142


>AJ000502-1|CAA04136.1|  299|Anopheles gambiae iron regulatory
           protein protein.
          Length = 299

 Score = 23.4 bits (48), Expect = 9.5
 Identities = 10/27 (37%), Positives = 17/27 (62%)
 Frame = +2

Query: 473 ARTVSDPGDQRWSVHASPARELSRDTP 553
           AR + + GD   + H SPA  ++R++P
Sbjct: 75  ARALLNLGDSVTTDHISPAGSIARNSP 101


>AB090822-1|BAC57919.1|  468|Anopheles gambiae gag-like protein
           protein.
          Length = 468

 Score = 23.4 bits (48), Expect = 9.5
 Identities = 11/32 (34%), Positives = 18/32 (56%)
 Frame = +1

Query: 421 AITTSTNRSEDTSGTAMSQNCLRSGRPTVERP 516
           A+  + + S DTS T++ +    SG PT+  P
Sbjct: 4   ALGLTRSMSADTSKTSVGKQLPASGIPTLRAP 35


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 948,586
Number of Sequences: 2352
Number of extensions: 19913
Number of successful extensions: 59
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 50
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 59
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 96334083
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)