Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= psV30415.Seq
(891 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_5548| Best HMM Match : PT (HMM E-Value=3.1) 36 0.044
SB_53502| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.077
SB_10354| Best HMM Match : AT_hook (HMM E-Value=0.045) 35 0.10
SB_36081| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.13
SB_13696| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.18
SB_29636| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.18
SB_56336| Best HMM Match : Ag332 (HMM E-Value=5.1) 33 0.31
SB_39578| Best HMM Match : DUF1213 (HMM E-Value=0.032) 33 0.41
SB_20306| Best HMM Match : Vicilin_N (HMM E-Value=1.8) 32 0.54
SB_47181| Best HMM Match : Pkinase (HMM E-Value=7.7e-31) 31 0.95
SB_56912| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.95
SB_37749| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.7
SB_20305| Best HMM Match : PT (HMM E-Value=1.8) 31 1.7
SB_39938| Best HMM Match : ANF_receptor (HMM E-Value=6.4e-14) 30 2.2
SB_57637| Best HMM Match : SRP40_C (HMM E-Value=2.3e-08) 30 2.2
SB_16018| Best HMM Match : Antimicrobial18 (HMM E-Value=0.89) 30 2.2
SB_38061| Best HMM Match : DUF995 (HMM E-Value=4) 30 2.9
SB_4237| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.9
SB_57515| Best HMM Match : CBFNT (HMM E-Value=3.3) 30 2.9
SB_32968| Best HMM Match : SRP40_C (HMM E-Value=0.013) 30 2.9
SB_24428| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.9
SB_12462| Best HMM Match : Kinesin (HMM E-Value=0) 30 2.9
SB_1091| Best HMM Match : Cupin_4 (HMM E-Value=0) 30 2.9
SB_52882| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.8
SB_50497| Best HMM Match : CH (HMM E-Value=0.0084) 29 3.8
SB_15422| Best HMM Match : TACC (HMM E-Value=6.4e-20) 29 3.8
SB_15028| Best HMM Match : Drf_FH1 (HMM E-Value=0.84) 29 3.8
SB_12670| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.8
SB_38133| Best HMM Match : TolA (HMM E-Value=0.38) 29 5.1
SB_37780| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.1
SB_4288| Best HMM Match : DUF1165 (HMM E-Value=2.8) 29 5.1
SB_42896| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.1
SB_16871| Best HMM Match : DUF1168 (HMM E-Value=9.9) 29 5.1
SB_14943| Best HMM Match : CRAL_TRIO (HMM E-Value=8e-05) 29 5.1
SB_46680| Best HMM Match : Helicase_C (HMM E-Value=3.8e-22) 29 6.7
SB_34554| Best HMM Match : RVT_1 (HMM E-Value=0.2) 29 6.7
SB_4344| Best HMM Match : zf-C2H2 (HMM E-Value=0) 29 6.7
SB_2026| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.7
SB_40271| Best HMM Match : TPR_2 (HMM E-Value=4.6e-24) 29 6.7
SB_32754| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.7
SB_26913| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.7
SB_59196| Best HMM Match : DUF593 (HMM E-Value=1.7) 28 8.8
SB_3796| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.8
SB_43512| Best HMM Match : RNA_pol_delta (HMM E-Value=4.7) 28 8.8
SB_5549| Best HMM Match : PT (HMM E-Value=1.9) 28 8.8
>SB_5548| Best HMM Match : PT (HMM E-Value=3.1)
Length = 157
Score = 35.9 bits (79), Expect = 0.044
Identities = 15/44 (34%), Positives = 24/44 (54%)
Frame = +2
Query: 110 PEEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAE 241
PE+ T +P++ PV+K P K E E+ ++ PED P +
Sbjct: 70 PEDRTEYKPEDKPVEKKPEGKPENQPEKKPEDKPEDKPEDKPED 113
Score = 31.5 bits (68), Expect = 0.95
Identities = 16/48 (33%), Positives = 24/48 (50%)
Frame = +2
Query: 98 KEVAPEEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAE 241
++ +P+ T PK SP K+ K+ N E+ T+ PED P E
Sbjct: 39 RKTSPKTSPKTSPKTSP--KTSQKQAGRQAGNKPEDRTEYKPEDKPVE 84
>SB_53502| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 323
Score = 35.1 bits (77), Expect = 0.077
Identities = 21/68 (30%), Positives = 30/68 (44%), Gaps = 4/68 (5%)
Frame = +2
Query: 65 LATMADAAVDKKEVAPEEVTSTEPKESPVKKSPAKKVEAAESNGKENGT----DEAPEDS 232
+ MAD E P E T T E+ K+P+ E E G+E + DEA ++
Sbjct: 32 IQNMADEEGKATEATPPEATETPAAEAAPAKAPSADAEVQEEAGEETASATQADEATTEA 91
Query: 233 PAENGDAE 256
+ G AE
Sbjct: 92 QPQEGAAE 99
>SB_10354| Best HMM Match : AT_hook (HMM E-Value=0.045)
Length = 191
Score = 34.7 bits (76), Expect = 0.10
Identities = 22/66 (33%), Positives = 33/66 (50%)
Frame = +2
Query: 68 ATMADAAVDKKEVAPEEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAENG 247
A A+A +KK APEE + + K+ V++S K A +G+ N D+ P +
Sbjct: 58 AKAAEAQPEKKAEAPEEKPAEDSKDQAVEESETKD---ASKDGEGNAADKRARGRP-KKA 113
Query: 248 DAEKAT 265
D E AT
Sbjct: 114 DGEPAT 119
>SB_36081| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 424
Score = 34.3 bits (75), Expect = 0.13
Identities = 20/56 (35%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Frame = +2
Query: 95 KKEVAPEEVTSTEPK-ESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAENGDAEK 259
K E + EE T+ P+ ESP KK +K E E +EA + ENG+ +K
Sbjct: 355 KHEKSDEEETAATPEVESPPKKHKKEKKSKKEKTKTEESDEEADISAVLENGEKKK 410
>SB_13696| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 676
Score = 33.9 bits (74), Expect = 0.18
Identities = 20/62 (32%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
Frame = +2
Query: 80 DAAVDKKEVAPEEVTSTEPK-ESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAENGDAE 256
DA++ +KE E TST K E +++ K + +E K T ++ EDS D+E
Sbjct: 372 DASLKQKEQLAETATSTNSKVEVDIQEGSTKIIPLSEETVKSTVTQDSKEDSEPVTPDSE 431
Query: 257 KA 262
A
Sbjct: 432 PA 433
>SB_29636| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 306
Score = 33.9 bits (74), Expect = 0.18
Identities = 19/50 (38%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Frame = +2
Query: 95 KKEVAPEEVTSTEPKESPVKKSPAKKVEA-AESNGKENGTDEAPEDSPAE 241
K E APEEV + + +ESP ++ K+ +A E KE +E ED+ E
Sbjct: 242 KVEDAPEEVEAPKEEESPKEEDTPKEEDAPKEDTPKEEAKEEPKEDTKEE 291
Score = 29.9 bits (64), Expect = 2.9
Identities = 21/60 (35%), Positives = 30/60 (50%), Gaps = 4/60 (6%)
Frame = +2
Query: 77 ADAAVDKKEVAPEEVTSTEPKESPVKKS----PAKKVEAAESNGKENGTDEAPEDSPAEN 244
A+ +K E PEE E KE ++ P + EAAE G GT++ PED +E+
Sbjct: 33 AEKQPEKVEDKPEEPAKDEEKEEAATEAEAEDPKEDPEAAEIPG---GTEDLPEDEYSED 89
>SB_56336| Best HMM Match : Ag332 (HMM E-Value=5.1)
Length = 366
Score = 33.1 bits (72), Expect = 0.31
Identities = 17/57 (29%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Frame = +2
Query: 92 DKKEVAPEEVTSTEP-KESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAENGDAEK 259
D+KE EE+ EP KE PV++ ++ E +E DE P+ +G+ ++
Sbjct: 245 DEKEREQEELVEEEPKKEEPVEEETKQEEPVEEEPKQEEAVDEEPKKEEQVDGEPKQ 301
>SB_39578| Best HMM Match : DUF1213 (HMM E-Value=0.032)
Length = 521
Score = 32.7 bits (71), Expect = 0.41
Identities = 16/54 (29%), Positives = 27/54 (50%)
Frame = +2
Query: 80 DAAVDKKEVAPEEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAE 241
D DK++ PE+ +P++ P K P K E + N + ++ PED P +
Sbjct: 433 DKPEDKQQNKPEDKPEDKPEDKPEDK-PEDKPEDKQQNKPKYKPEDKPEDKPED 485
Score = 30.3 bits (65), Expect = 2.2
Identities = 17/55 (30%), Positives = 25/55 (45%)
Frame = +2
Query: 80 DAAVDKKEVAPEEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAEN 244
D DK E PE+ +PK P K P K E + E+ ++ PE+ +N
Sbjct: 453 DKPEDKPEDKPEDKQQNKPKYKPEDK-PEDKPEDKPKDKLEDRPEDKPEEKSKDN 506
>SB_20306| Best HMM Match : Vicilin_N (HMM E-Value=1.8)
Length = 360
Score = 32.3 bits (70), Expect = 0.54
Identities = 17/54 (31%), Positives = 27/54 (50%)
Frame = +2
Query: 80 DAAVDKKEVAPEEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAE 241
D DK E PEE +P+E P + +P K E + + E+ ++ PE P +
Sbjct: 304 DKLEDKPEDRPEEKPEDKPEEKP-EDNPEDKPEYKQEDKPEDKQEDKPECKPED 356
>SB_47181| Best HMM Match : Pkinase (HMM E-Value=7.7e-31)
Length = 801
Score = 31.5 bits (68), Expect = 0.95
Identities = 18/47 (38%), Positives = 22/47 (46%)
Frame = +2
Query: 113 EEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAENGDA 253
EE E SPV+ A+ VE S K+N E E+ P GDA
Sbjct: 145 EEKDFFEETGSPVEHEVAENVEDDSSQTKKNNETELQEEEPPSVGDA 191
>SB_56912| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 443
Score = 31.5 bits (68), Expect = 0.95
Identities = 15/31 (48%), Positives = 19/31 (61%)
Frame = +2
Query: 170 KVEAAESNGKENGTDEAPEDSPAENGDAEKA 262
K E +E+NG ENG +EA E+ PA D A
Sbjct: 313 KNEDSEANGDENGHNEASEEKPALKRDGTMA 343
>SB_37749| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1103
Score = 30.7 bits (66), Expect = 1.7
Identities = 17/47 (36%), Positives = 23/47 (48%)
Frame = +2
Query: 92 DKKEVAPEEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDS 232
+KKE +E TE S KSPA K + S N +D++P S
Sbjct: 523 EKKEDEGKEPDKTEQTTSAKSKSPASKDGKSRSQKGSNSSDDSPVKS 569
>SB_20305| Best HMM Match : PT (HMM E-Value=1.8)
Length = 127
Score = 30.7 bits (66), Expect = 1.7
Identities = 18/56 (32%), Positives = 26/56 (46%)
Frame = +2
Query: 74 MADAAVDKKEVAPEEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAE 241
M D DK E PE+ +PK+ KS K + E N E+ ++ P D P +
Sbjct: 1 MEDKPEDKPEDKPEDKPEGKPKDKSEDKSGDKPQDKPE-NKPEDQPEDKPGDKPED 55
>SB_39938| Best HMM Match : ANF_receptor (HMM E-Value=6.4e-14)
Length = 966
Score = 30.3 bits (65), Expect = 2.2
Identities = 18/49 (36%), Positives = 23/49 (46%), Gaps = 2/49 (4%)
Frame = +2
Query: 101 EVAPEEVTST--EPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAE 241
EV PEEV + K +PV+ P + E S E E PE P+E
Sbjct: 725 EVVPEEVEVDVKQTKSTPVESEPTETPEVVPSEKLEGIQAEVPEVMPSE 773
>SB_57637| Best HMM Match : SRP40_C (HMM E-Value=2.3e-08)
Length = 654
Score = 30.3 bits (65), Expect = 2.2
Identities = 19/68 (27%), Positives = 32/68 (47%), Gaps = 3/68 (4%)
Frame = +2
Query: 68 ATMADAAVDKKEVAPEEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDE---APEDSPA 238
A ++ D EE S + S KK+PAK+ +++ + ++ +DE P S
Sbjct: 26 AKQESSSEDDSSDDDEEEKSKKKAVSKEKKTPAKQESSSDDSSSDDSSDEDTKMPTKSKL 85
Query: 239 ENGDAEKA 262
+NG KA
Sbjct: 86 KNGTKTKA 93
>SB_16018| Best HMM Match : Antimicrobial18 (HMM E-Value=0.89)
Length = 1494
Score = 30.3 bits (65), Expect = 2.2
Identities = 23/62 (37%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Frame = -1
Query: 255 SASPFSAGESS-GASSVPFSLPLLSAASTFLAGDFLTGDSFGSVEVTSSGATSFLSTAAS 79
S S F SS P SLP S+ L DFLT S S +TSS + S T++S
Sbjct: 453 SLSDFLTSSSSLSVFPTPSSLPSDFLTSSSLPSDFLTSSSSLSDFLTSSSSLSDFLTSSS 512
Query: 78 AI 73
++
Sbjct: 513 SL 514
Score = 28.7 bits (61), Expect = 6.7
Identities = 20/52 (38%), Positives = 27/52 (51%)
Frame = -1
Query: 228 SSGASSVPFSLPLLSAASTFLAGDFLTGDSFGSVEVTSSGATSFLSTAASAI 73
SS S SLP S+ L DFLT S S +TSS + S T++S++
Sbjct: 708 SSSLSDFLTSLPSDFLTSSSLPSDFLTSSSSLSDFLTSSSSLSDFLTSSSSL 759
Score = 28.3 bits (60), Expect = 8.8
Identities = 17/40 (42%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = -1
Query: 195 PLLSAASTFLAGDFLTGDSFGSVEVTSSGATS-FLSTAAS 79
P+ FL DFLT S S +TSS + S FLS ++S
Sbjct: 304 PISEQQGIFLPSDFLTSSSLPSDFLTSSSSLSDFLSLSSS 343
>SB_38061| Best HMM Match : DUF995 (HMM E-Value=4)
Length = 220
Score = 29.9 bits (64), Expect = 2.9
Identities = 21/77 (27%), Positives = 28/77 (36%)
Frame = +2
Query: 71 TMADAAVDKKEVAPEEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAENGD 250
T A V E P V + E E S + E E E+ E +D P
Sbjct: 88 TDASTTVPLYEATPT-VANMEKNEHDGNSSDSGNSEVTEQEHDEDANSEENDDKPTRKTK 146
Query: 251 AEKATMHLRTVMPQKRK 301
+KA L + QK+K
Sbjct: 147 LDKAQRKLNKRLRQKKK 163
>SB_4237| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1438
Score = 29.9 bits (64), Expect = 2.9
Identities = 19/47 (40%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Frame = +2
Query: 77 ADAAVDKKEVAPEE-VTSTEPKESPVKKSPAKKVEAAESNGKENGTD 214
+D ++ E+A EE VTS E E V PA+KVEA+ +E G +
Sbjct: 823 SDVPTEEAEMATEEAVTSVEEAEDKV---PAEKVEASIEEAEEPGEE 866
>SB_57515| Best HMM Match : CBFNT (HMM E-Value=3.3)
Length = 213
Score = 29.9 bits (64), Expect = 2.9
Identities = 19/69 (27%), Positives = 31/69 (44%)
Frame = +2
Query: 98 KEVAPEEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAENGDAEKATMHLR 277
K+ A E + + K+ VE E G+E +EA E++PAE D ++ R
Sbjct: 144 KDKAGSETSLNAADDEETKEKTEIAVEE-EKEGEEFKREEAAEETPAEVADGKEKKQRRR 202
Query: 278 TVMPQKRKR 304
K+K+
Sbjct: 203 RFSFSKKKK 211
>SB_32968| Best HMM Match : SRP40_C (HMM E-Value=0.013)
Length = 440
Score = 29.9 bits (64), Expect = 2.9
Identities = 17/53 (32%), Positives = 28/53 (52%), Gaps = 3/53 (5%)
Frame = +2
Query: 113 EEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDE---APEDSPAENGDAEKA 262
EE S + S KK+PAK+ +++ + ++ +DE P S +NG KA
Sbjct: 284 EEEKSKKKAVSKEKKTPAKQESSSDDSSSDDSSDEDTKMPTKSKLKNGTKTKA 336
Score = 29.1 bits (62), Expect = 5.1
Identities = 16/65 (24%), Positives = 29/65 (44%)
Frame = +2
Query: 68 ATMADAAVDKKEVAPEEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAENG 247
A D++ D +E +PK+ KK+P K+ ++E + + DE P+ G
Sbjct: 113 AATEDSSSDDDSSGEDE--DEKPKKKVEKKTPTKQESSSEEDDSSDDKDEKPKKKADNKG 170
Query: 248 DAEKA 262
+A
Sbjct: 171 KKTQA 175
>SB_24428| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 532
Score = 29.9 bits (64), Expect = 2.9
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = -3
Query: 343 FLHQEPQISSSHQSLSFLWHHRSQMHRCFLG 251
FL + ISSS + LW +RS+ HR F G
Sbjct: 398 FLKESGWISSSRFCVVHLWRNRSERHRFFRG 428
>SB_12462| Best HMM Match : Kinesin (HMM E-Value=0)
Length = 803
Score = 29.9 bits (64), Expect = 2.9
Identities = 21/71 (29%), Positives = 33/71 (46%)
Frame = +2
Query: 92 DKKEVAPEEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAENGDAEKATMH 271
D++ VA + V+S P+ A + S G NG+ EAPE+ + EK
Sbjct: 459 DEEGVAAQGVSSVTPEAGSALSVIALEERGRSSTGSPNGSLEAPEELQEKMVGGEKKG-- 516
Query: 272 LRTVMPQKRKR 304
T + +KRK+
Sbjct: 517 -DTKLKEKRKQ 526
>SB_1091| Best HMM Match : Cupin_4 (HMM E-Value=0)
Length = 584
Score = 29.9 bits (64), Expect = 2.9
Identities = 23/64 (35%), Positives = 34/64 (53%), Gaps = 10/64 (15%)
Frame = +2
Query: 95 KKEVAPEEVTSTEPKESPVKKSPAKK--VEAAESNGKEN-------GTDEAPEDSPAENG 247
KKE + EE +E ++ KK+ KK E ES +E GT+++ EDS E+G
Sbjct: 493 KKEESEEEEEKSEEEKKSKKKTKTKKGKKEKQESESEEESDAEYELGTEDSSEDSGEESG 552
Query: 248 -DAE 256
D+E
Sbjct: 553 PDSE 556
>SB_52882| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1413
Score = 29.5 bits (63), Expect = 3.8
Identities = 18/52 (34%), Positives = 24/52 (46%), Gaps = 1/52 (1%)
Frame = +2
Query: 77 ADAAVDKKEVAPEEVTSTEPKESPVKKSPA-KKVEAAESNGKENGTDEAPED 229
A AVDK+E P+ E K + SPA KVE + + G+ ED
Sbjct: 104 APQAVDKEEEKPQAADKEEEKSQKEESSPATDKVEPKPAPSEAEGSSLGGED 155
>SB_50497| Best HMM Match : CH (HMM E-Value=0.0084)
Length = 2086
Score = 29.5 bits (63), Expect = 3.8
Identities = 18/63 (28%), Positives = 27/63 (42%)
Frame = +2
Query: 68 ATMADAAVDKKEVAPEEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAENG 247
A D A E P E S E + ++ ++ +SN E+ +E P D P E+
Sbjct: 1327 APEVDIAEPTSEETPVEGESLEAQAVGHVEAAGEETSPVQSNQIESTVEEVPTDVPTESP 1386
Query: 248 DAE 256
AE
Sbjct: 1387 SAE 1389
>SB_15422| Best HMM Match : TACC (HMM E-Value=6.4e-20)
Length = 1362
Score = 29.5 bits (63), Expect = 3.8
Identities = 18/60 (30%), Positives = 29/60 (48%)
Frame = -1
Query: 255 SASPFSAGESSGASSVPFSLPLLSAASTFLAGDFLTGDSFGSVEVTSSGATSFLSTAASA 76
SA FS G G PF LP++S AS + FG V++ S + +S+ +++
Sbjct: 644 SAFMFSLGNPDGRK--PFKLPIISPASVAATSTSTSMPCFGRVDLVLSDVMANISSQSTS 701
>SB_15028| Best HMM Match : Drf_FH1 (HMM E-Value=0.84)
Length = 944
Score = 29.5 bits (63), Expect = 3.8
Identities = 18/63 (28%), Positives = 27/63 (42%)
Frame = +2
Query: 68 ATMADAAVDKKEVAPEEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAENG 247
A D A E P E S E + ++ ++ +SN E+ +E P D P E+
Sbjct: 222 APEVDIAEPTSEETPVEGESLEAQAVGHVEAAGEETSPVQSNQIESTVEEVPTDVPTESP 281
Query: 248 DAE 256
AE
Sbjct: 282 SAE 284
>SB_12670| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1272
Score = 29.5 bits (63), Expect = 3.8
Identities = 23/79 (29%), Positives = 35/79 (44%), Gaps = 4/79 (5%)
Frame = +2
Query: 80 DAAVDKKEVAPEEVTSTEPKESPVKKSPA---KKVEAAESNGKENGTD-EAPEDSPAENG 247
D+ V + ++P + KE P +KSP K A S K N ++ E+ DSP E
Sbjct: 750 DSPVRQPSLSPSP-SPERKKEDPKEKSPPLPKSKKMANRSYRKHNSSESESDSDSPPERK 808
Query: 248 DAEKATMHLRTVMPQKRKR 304
+ R P +R+R
Sbjct: 809 KGSVSPRDQRRRSPMRRRR 827
>SB_38133| Best HMM Match : TolA (HMM E-Value=0.38)
Length = 2114
Score = 29.1 bits (62), Expect = 5.1
Identities = 16/55 (29%), Positives = 26/55 (47%)
Frame = +2
Query: 95 KKEVAPEEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAENGDAEK 259
KKE E+ + +E+ ++ KK E E + K+N +E ED E E+
Sbjct: 1880 KKENEEEDDKKEKKEENEEEEKKKKKKENEEEDDKKNNKEENEEDEKKEKKKKEE 1934
>SB_37780| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 164
Score = 29.1 bits (62), Expect = 5.1
Identities = 15/40 (37%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
Frame = +2
Query: 92 DKKEVAPEEVTSTEPKESPVK--KSPAKKVEAAESNGKEN 205
D + AP VTS+ P + P+K K+ + +AA SN + N
Sbjct: 116 DVTQSAPTRVTSSLPSKQPIKSSKTSRSQTKAAPSNARLN 155
>SB_4288| Best HMM Match : DUF1165 (HMM E-Value=2.8)
Length = 162
Score = 29.1 bits (62), Expect = 5.1
Identities = 16/41 (39%), Positives = 21/41 (51%), Gaps = 3/41 (7%)
Frame = +2
Query: 113 EEVTSTEPKESPVKKSP---AKKVEAAESNGKENGTDEAPE 226
E+V S+ PK+ +K P KK EA E +E DE E
Sbjct: 115 EKVASSSPKKREPRKKPKAGKKKEEAVEEESEEESMDEKNE 155
>SB_42896| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 994
Score = 29.1 bits (62), Expect = 5.1
Identities = 23/89 (25%), Positives = 42/89 (47%), Gaps = 17/89 (19%)
Frame = +2
Query: 80 DAAVDKKEVAPEEVTSTEPKESPVKK-----SPAKKVEAAESN--------GKEN----G 208
D AVD + + + E +KK SPA++VE+ + N GKE G
Sbjct: 554 DGAVDSTQSPDSKPNKPDQSEESIKKDRSPISPAQQVESTDGNVGDDEVSSGKEGAVSAG 613
Query: 209 TDEAPEDSPAENGDAEKATMHLRTVMPQK 295
D+ E +PA + DA + + ++ ++ ++
Sbjct: 614 NDQDVEMAPATSSDAVSSDVVMKPIVSEQ 642
>SB_16871| Best HMM Match : DUF1168 (HMM E-Value=9.9)
Length = 100
Score = 29.1 bits (62), Expect = 5.1
Identities = 16/41 (39%), Positives = 21/41 (51%), Gaps = 3/41 (7%)
Frame = +2
Query: 113 EEVTSTEPKESPVKKSP---AKKVEAAESNGKENGTDEAPE 226
E+V S+ PK+ +K P KK EA E +E DE E
Sbjct: 53 EKVASSSPKKREPRKKPKAGKKKEEAVEEESEEESMDEKNE 93
>SB_14943| Best HMM Match : CRAL_TRIO (HMM E-Value=8e-05)
Length = 391
Score = 29.1 bits (62), Expect = 5.1
Identities = 20/46 (43%), Positives = 23/46 (50%)
Frame = +2
Query: 110 PEEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAENG 247
P E S +P SPVK++P K V S E TDE E ENG
Sbjct: 255 PAESKSDKPS-SPVKETPVKNV---PSTASEESTDE--EKKSTENG 294
>SB_46680| Best HMM Match : Helicase_C (HMM E-Value=3.8e-22)
Length = 1058
Score = 28.7 bits (61), Expect = 6.7
Identities = 13/42 (30%), Positives = 23/42 (54%)
Frame = +2
Query: 119 VTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAEN 244
+ S ++S VKKS +K + + ++ + PED PAE+
Sbjct: 64 IPSDHKRKSFVKKSASKSKKKRKKRKQQGDEESEPEDIPAES 105
>SB_34554| Best HMM Match : RVT_1 (HMM E-Value=0.2)
Length = 671
Score = 28.7 bits (61), Expect = 6.7
Identities = 14/43 (32%), Positives = 20/43 (46%)
Frame = -3
Query: 316 SSHQSLSFLWHHRSQMHRCFLGITIFSRRIFWGFIGTILFAIT 188
S H L +L S+M LG+T+ S I +G L +T
Sbjct: 203 SGHSDLPYLLQPNSRMRAGILGVTVLSGDIAIDLVGVTLVQVT 245
>SB_4344| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 1080
Score = 28.7 bits (61), Expect = 6.7
Identities = 19/59 (32%), Positives = 30/59 (50%), Gaps = 3/59 (5%)
Frame = +2
Query: 74 MADAAVDKKEVAPEEVTSTEPKESPVKKSPAKKVEAAES-NGKENGTDE--APEDSPAE 241
MA+ VDK+ E + + ++ KK AKK E ++ G ++G DE ED P +
Sbjct: 620 MAEKEVDKEGDKESEKSEKDGEKGDEKKDDAKKQEDEDAEEGADDGYDEYYYDEDEPLQ 678
>SB_2026| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1789
Score = 28.7 bits (61), Expect = 6.7
Identities = 19/63 (30%), Positives = 31/63 (49%), Gaps = 4/63 (6%)
Frame = +2
Query: 83 AAVDKKEVAPEEVTSTEPKESPVKKSPAKKVEAAESNG---KENGTDEAPE-DSPAENGD 250
A + K+ PEE S PK + +S K E+ + G K+ G E + +S + G+
Sbjct: 1484 ATPEPKKEEPEEKPSPSPKTANKSESEKGKGESEKDKGESEKDKGESEKDKGESEKDKGE 1543
Query: 251 AEK 259
+EK
Sbjct: 1544 SEK 1546
>SB_40271| Best HMM Match : TPR_2 (HMM E-Value=4.6e-24)
Length = 1329
Score = 28.7 bits (61), Expect = 6.7
Identities = 16/51 (31%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
Frame = +2
Query: 152 KKSPAKKVEAAESNGKENGTDEAPEDS--PAENGDAEKATMHLRTVMPQKR 298
K SP KK + E+N + T E+ S +NGD++ + H + ++P+ R
Sbjct: 162 KSSPVKKTKTEETNNETEVTQESTNASVNSNDNGDSQPKS-HPKVLVPRCR 211
>SB_32754| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 5659
Score = 28.7 bits (61), Expect = 6.7
Identities = 22/65 (33%), Positives = 30/65 (46%), Gaps = 1/65 (1%)
Frame = +2
Query: 104 VAPEEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPA-ENGDAEKATMHLRT 280
VAPE + E +PV +A E+ K T APE + A E A + TM T
Sbjct: 4634 VAPETTMAPETTAAPVSTVALVTTKAPETT-KAPETTVAPESTMAPETTVAPETTMAPET 4692
Query: 281 VMPQK 295
+PQ+
Sbjct: 4693 TIPQE 4697
>SB_26913| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 121
Score = 28.7 bits (61), Expect = 6.7
Identities = 16/42 (38%), Positives = 25/42 (59%)
Frame = +2
Query: 110 PEEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSP 235
PE+ T + ++ P K+P + AAE +GKEN A +D+P
Sbjct: 79 PEDSTKKKRRKKP--KTPTRASAAAEESGKENEAFVA-DDTP 117
>SB_59196| Best HMM Match : DUF593 (HMM E-Value=1.7)
Length = 1376
Score = 28.3 bits (60), Expect = 8.8
Identities = 16/49 (32%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Frame = +2
Query: 95 KKEVAPEEVTST--EPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSP 235
K + E+ T++ EP + PVK+ P K V KEN ++P+++P
Sbjct: 1150 KMQKTEEKTTASKSEPAQEPVKQPPVKDV-------KENSLPQSPQETP 1191
>SB_3796| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1051
Score = 28.3 bits (60), Expect = 8.8
Identities = 12/50 (24%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
Frame = -3
Query: 301 LSFLWHHRSQMH-RCFLGITIFSRRIFWGFIGTILFAITFCSFNFLSWRL 155
+ + WH H RC +F +FWG++G + +C F+ + + +
Sbjct: 787 MKYDWHVPDTPHERC-----VFRISLFWGYVGCCYRFLKYCLFDLMRYNI 831
>SB_43512| Best HMM Match : RNA_pol_delta (HMM E-Value=4.7)
Length = 241
Score = 28.3 bits (60), Expect = 8.8
Identities = 12/48 (25%), Positives = 25/48 (52%)
Frame = +2
Query: 113 EEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAENGDAE 256
++ + K+ KK KKV+ + + K+N + + E +++GD E
Sbjct: 162 DDKKKVDEKKEDEKKDDDKKVDEKKEDDKKNDSSASGESEDSDDGDDE 209
>SB_5549| Best HMM Match : PT (HMM E-Value=1.9)
Length = 282
Score = 28.3 bits (60), Expect = 8.8
Identities = 17/60 (28%), Positives = 27/60 (45%)
Frame = +2
Query: 80 DAAVDKKEVAPEEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAENGDAEK 259
D D E PE +P++ P +K P KK E + E+ + PED + + +K
Sbjct: 186 DMPEDMPEDKPEYRPEYKPEDKP-EKKPEKKPEDKSEDKPEDKHKDKPEDKLEDKPEDKK 244
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,065,811
Number of Sequences: 59808
Number of extensions: 431481
Number of successful extensions: 1700
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 1345
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1680
length of database: 16,821,457
effective HSP length: 82
effective length of database: 11,917,201
effective search space used: 2550281014
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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