Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= psV30412.Seq
(477 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P62910 Cluster: 60S ribosomal protein L32; n=83; Eukary... 86 4e-16
UniRef50_P49211 Cluster: 60S ribosomal protein L32-1; n=72; Euka... 69 4e-11
UniRef50_A2R659 Cluster: Contig An15c0220, complete genome; n=7;... 64 1e-09
UniRef50_UPI0000D9DE6C Cluster: PREDICTED: similar to 60S riboso... 64 2e-09
UniRef50_UPI00005A1969 Cluster: PREDICTED: similar to 60S riboso... 61 1e-08
UniRef50_A0DPG3 Cluster: Chromosome undetermined scaffold_59, wh... 57 2e-07
UniRef50_Q9XFE3 Cluster: 60S ribosomal protein; n=1; Oryza sativ... 56 4e-07
UniRef50_P38061 Cluster: 60S ribosomal protein L32; n=39; Eukary... 56 4e-07
UniRef50_Q0J0S1 Cluster: Os09g0501200 protein; n=1; Oryza sativa... 54 2e-06
UniRef50_P34040 Cluster: 60S ribosomal protein L32; n=1; Hypocre... 54 2e-06
UniRef50_Q9NGS3 Cluster: 60S ribosomal protein L32; n=8; Trypano... 53 4e-06
UniRef50_Q7R1L8 Cluster: GLP_28_64726_64316; n=1; Giardia lambli... 53 4e-06
UniRef50_UPI00005A3317 Cluster: PREDICTED: similar to 60S riboso... 52 7e-06
UniRef50_Q8SS18 Cluster: 60S ribosomal protein L32; n=1; Encepha... 50 2e-05
UniRef50_Q96BP1 Cluster: RPL32P3 protein; n=2; Catarrhini|Rep: R... 49 5e-05
UniRef50_A2F2J1 Cluster: Ribosomal protein L32, putative; n=5; T... 45 0.001
UniRef50_Q9SEV3 Cluster: 60S ribosomal protein L32; n=1; Guillar... 42 0.007
UniRef50_Q3LWI6 Cluster: Ribosomal protein L32; n=1; Bigelowiell... 42 0.009
UniRef50_UPI00015537AF Cluster: PREDICTED: hypothetical protein;... 41 0.012
UniRef50_A0RUF7 Cluster: Ribosomal protein L32E; n=2; Thermoprot... 40 0.038
UniRef50_Q1RQD0 Cluster: Ribosomal protein L32; n=1; Nyctotherus... 39 0.050
UniRef50_Q9YF92 Cluster: 50S ribosomal protein L32e; n=2; Desulf... 37 0.27
UniRef50_Q975J7 Cluster: 50S ribosomal protein L32e; n=3; Sulfol... 36 0.46
UniRef50_Q9UX90 Cluster: 50S ribosomal protein L32e; n=2; Sulfol... 36 0.61
UniRef50_A4RVQ1 Cluster: Predicted protein; n=1; Ostreococcus lu... 35 0.81
UniRef50_UPI00006CB715 Cluster: TPR Domain containing protein; n... 35 1.1
UniRef50_Q1VH30 Cluster: 50S ribosomal protein L32e; n=3; cellul... 34 1.4
UniRef50_O26128 Cluster: 50S ribosomal protein L32e; n=3; Methan... 33 2.5
UniRef50_Q9J861 Cluster: ORF76 cg30; n=1; Spodoptera exigua MNPV... 33 3.3
UniRef50_A3ZNA7 Cluster: Probable RNA polymerase sigma-E factor;... 33 3.3
UniRef50_Q39IF6 Cluster: TPR repeat protein; n=26; Burkholderia|... 33 4.3
UniRef50_Q9FJ30 Cluster: Putative F-box/LRR-repeat protein At5g4... 33 4.3
UniRef50_Q6PB51 Cluster: Coiled-coil domain-containing protein 1... 33 4.3
UniRef50_UPI00015BB237 Cluster: LSU ribosomal protein L32E; n=1;... 32 5.7
UniRef50_A1FY02 Cluster: Putative uncharacterized protein; n=1; ... 32 5.7
UniRef50_A7ANX2 Cluster: Elongation factor Tu GTP binding domain... 32 5.7
UniRef50_A3DNC4 Cluster: Ribosomal protein L32e; n=1; Staphyloth... 32 5.7
UniRef50_A5AR50 Cluster: Putative uncharacterized protein; n=2; ... 32 7.5
UniRef50_A7DNZ6 Cluster: Putative uncharacterized protein; n=1; ... 31 10.0
UniRef50_P54010 Cluster: 50S ribosomal protein L32e; n=10; Eurya... 31 10.0
UniRef50_Q2W4D7 Cluster: Lipid-A-disaccharide synthase; n=4; Rho... 31 10.0
>UniRef50_P62910 Cluster: 60S ribosomal protein L32; n=83;
Eukaryota|Rep: 60S ribosomal protein L32 - Homo sapiens
(Human)
Length = 135
Score = 85.8 bits (203), Expect = 4e-16
Identities = 49/90 (54%), Positives = 61/90 (67%), Gaps = 1/90 (1%)
Frame = +1
Query: 169 QRFKGQYLMPNIGYGSNKKTRHMLPNGFRRS*FTMLKSWK-S**CKTGSTAQRSLMVSLR 345
+RFKGQ LMPNIGYGSNKKT+HMLP+GFR+ +K + C A+ + VS +
Sbjct: 47 RRFKGQILMPNIGYGSNKKTKHMLPSGFRKFLVHNVKELEVLLMCNKSYCAEIAHNVSSK 106
Query: 346 RSGS*FVERAQQLSIRVTNAAARLRSQENE 435
+ VERA QL+IRVTN ARLRS+ENE
Sbjct: 107 NRKA-IVERAAQLAIRVTNPNARLRSEENE 135
Score = 84.6 bits (200), Expect = 1e-15
Identities = 36/44 (81%), Positives = 41/44 (93%)
Frame = +2
Query: 38 AIRPVYRPTIVKKRTKRFIRHQSDRYDKLKRNWRKPRGIDNRVR 169
A+RP+ +P IVKKRTK+FIRHQSDRY K+KRNWRKPRGIDNRVR
Sbjct: 3 ALRPLVKPKIVKKRTKKFIRHQSDRYVKIKRNWRKPRGIDNRVR 46
>UniRef50_P49211 Cluster: 60S ribosomal protein L32-1; n=72;
Eukaryota|Rep: 60S ribosomal protein L32-1 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 133
Score = 69.3 bits (162), Expect = 4e-11
Identities = 41/90 (45%), Positives = 56/90 (62%), Gaps = 1/90 (1%)
Frame = +1
Query: 169 QRFKGQYLMPNIGYGSNKKTRHMLPNGFRRS*FTMLKSWKS**CKTGS-TAQRSLMVSLR 345
++FKG LMPN+GYGS+KKTRH LPNGF++ + + A+ + VS +
Sbjct: 45 RKFKGVTLMPNVGYGSDKKTRHYLPNGFKKFVVHNTSELELLMMHNRTYCAEIAHNVSTK 104
Query: 346 RSGS*FVERAQQLSIRVTNAAARLRSQENE 435
+ + VERA QL + VTN ARLRSQE+E
Sbjct: 105 KRKA-IVERASQLDVVVTNRLARLRSQEDE 133
Score = 62.9 bits (146), Expect = 4e-09
Identities = 28/43 (65%), Positives = 31/43 (72%)
Frame = +3
Query: 234 YAPKWIPKVLVHNVKELEILMMQNRKYCAEIAHGVSSKKRKLI 362
Y P K +VHN ELE+LMM NR YCAEIAH VS+KKRK I
Sbjct: 67 YLPNGFKKFVVHNTSELELLMMHNRTYCAEIAHNVSTKKRKAI 109
Score = 52.8 bits (121), Expect = 4e-06
Identities = 24/45 (53%), Positives = 34/45 (75%)
Frame = +2
Query: 35 MAIRPVYRPTIVKKRTKRFIRHQSDRYDKLKRNWRKPRGIDNRVR 169
MA+ P+ +VKKR+ +FIR QSDR +K +WR+P+GID+RVR
Sbjct: 1 MAV-PLLTKKVVKKRSAKFIRPQSDRRITVKESWRRPKGIDSRVR 44
>UniRef50_A2R659 Cluster: Contig An15c0220, complete genome; n=7;
Trichocomaceae|Rep: Contig An15c0220, complete genome -
Aspergillus niger
Length = 179
Score = 64.5 bits (150), Expect = 1e-09
Identities = 32/58 (55%), Positives = 40/58 (68%)
Frame = +2
Query: 32 KMAIRPVYRPTIVKKRTKRFIRHQSDRYDKLKRNWRKPRGIDNRVRSGSRVNT*CPTL 205
KM + + P IVKKRTKRF RHQSDR+ + +WRKP+GIDNRVR R N P++
Sbjct: 48 KMVLAKKHVP-IVKKRTKRFWRHQSDRFKCVPESWRKPKGIDNRVRRRFRGNIPMPSI 104
Score = 48.8 bits (111), Expect = 6e-05
Identities = 27/86 (31%), Positives = 44/86 (51%)
Frame = +1
Query: 169 QRFKGQYLMPNIGYGSNKKTRHMLPNGFRRS*FTMLKSWKS**CKTGSTAQRSLMVSLRR 348
+RF+G MP+IGYGSNKKT+HM+P+G + K + + A R
Sbjct: 93 RRFRGNIPMPSIGYGSNKKTKHMMPSGHKAFLVHNPKDVELLLMHNRTYAAEIASAVSSR 152
Query: 349 SGS*FVERAQQLSIRVTNAAARLRSQ 426
+ +A+ L ++VTN R+ ++
Sbjct: 153 KRVDIIAKAKALGVKVTNPKGRVTTE 178
>UniRef50_UPI0000D9DE6C Cluster: PREDICTED: similar to 60S ribosomal
protein L32; n=1; Macaca mulatta|Rep: PREDICTED: similar
to 60S ribosomal protein L32 - Macaca mulatta
Length = 199
Score = 63.7 bits (148), Expect = 2e-09
Identities = 39/90 (43%), Positives = 55/90 (61%), Gaps = 1/90 (1%)
Frame = +1
Query: 169 QRFKGQYLMPNIGYGSNKKTRHMLPNGFRRS*FTMLKSWKS**-CKTGSTAQRSLMVSLR 345
+RFK Q+LM NIGYGSNKK +H LP+ ++ +K + C A+ + VS +
Sbjct: 111 RRFKSQFLMSNIGYGSNKKIKHTLPSSLQKFLVHNIKELEVLLKCNKSYCAKIAYNVSSK 170
Query: 346 RSGS*FVERAQQLSIRVTNAAARLRSQENE 435
+ VERA QL+IRVT+ ARL S+EN+
Sbjct: 171 NHKA-IVERAAQLAIRVTSHNARLCSKENK 199
Score = 60.1 bits (139), Expect = 2e-08
Identities = 38/106 (35%), Positives = 54/106 (50%), Gaps = 6/106 (5%)
Frame = +3
Query: 63 QSSKRGRRDLSGINRIAMTNLRGIGVNLEVLTTESA------AVQGSILDAQHWLRFQQE 224
Q +RG R G ++ M+ L G +LEVLTT + L + ++
Sbjct: 70 QDFQRGTRHSPGSSQTDMSKLSVTGRHLEVLTTRGIDNRIHRRFKSQFLMSNIGYGSNKK 129
Query: 225 DPSYAPKWIPKVLVHNVKELEILMMQNRKYCAEIAHGVSSKKRKLI 362
P + K LVHN+KELE+L+ N+ YCA+IA+ VSSK K I
Sbjct: 130 IKHTLPSSLQKFLVHNIKELEVLLKCNKSYCAKIAYNVSSKNHKAI 175
>UniRef50_UPI00005A1969 Cluster: PREDICTED: similar to 60S ribosomal
protein L32; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to 60S ribosomal protein L32 - Canis familiaris
Length = 204
Score = 61.3 bits (142), Expect = 1e-08
Identities = 28/46 (60%), Positives = 37/46 (80%), Gaps = 2/46 (4%)
Frame = +2
Query: 35 MAIRPVYRPTIVK--KRTKRFIRHQSDRYDKLKRNWRKPRGIDNRV 166
++IRP+ +P IVK KRTK+FI+ QSD+Y K+K NW KPRG+ NRV
Sbjct: 59 LSIRPLGKPKIVKIKKRTKKFIQLQSDQYAKIKHNWWKPRGVGNRV 104
Score = 46.0 bits (104), Expect = 4e-04
Identities = 28/61 (45%), Positives = 35/61 (57%)
Frame = +1
Query: 169 QRFKGQYLMPNIGYGSNKKTRHMLPNGFRRS*FTMLKSWKS**CKTGSTAQRSLMVSLRR 348
+RFK Q LMPN GY SNKKT+ ML +GF + +K + ST QR L VS R
Sbjct: 106 RRFKDQILMPNTGYRSNKKTKPMLLSGFEKFLVYNIKEVEVLLMCNKSTIQRLLTVSPPR 165
Query: 349 S 351
+
Sbjct: 166 T 166
>UniRef50_A0DPG3 Cluster: Chromosome undetermined scaffold_59, whole
genome shotgun sequence; n=10; Eukaryota|Rep: Chromosome
undetermined scaffold_59, whole genome shotgun sequence
- Paramecium tetraurelia
Length = 136
Score = 57.2 bits (132), Expect = 2e-07
Identities = 28/56 (50%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Frame = +2
Query: 35 MAIRPVYRPTIVKKRTKRFIRHQSDRYD-KLKRNWRKPRGIDNRVRSGSRVNT*CP 199
M ++ + IV KRTKRF+R +S+ Y KL+ +WR+PRGIDNRVR R N P
Sbjct: 1 MVVKALAHKRIVHKRTKRFVRFESEDYPHKLRPSWRRPRGIDNRVRRRFRGNRPMP 56
Score = 44.4 bits (100), Expect = 0.001
Identities = 26/89 (29%), Positives = 46/89 (51%)
Frame = +1
Query: 169 QRFKGQYLMPNIGYGSNKKTRHMLPNGFRRS*FTMLKSWKS**CKTGSTAQRSLMVSLRR 348
+RF+G MP G+ +KKTR++ +GFR+ T K + + A R
Sbjct: 47 RRFRGNRPMPKAGHRGDKKTRYLDQSGFRKLLITNEKDLELLLTNNRTFAGELAHNLSAR 106
Query: 349 SGS*FVERAQQLSIRVTNAAARLRSQENE 435
+ V RA +L++R+TN ++R++E +
Sbjct: 107 KRATLVRRAAELNVRLTNGKGKVRAEEKK 135
Score = 39.5 bits (88), Expect = 0.038
Identities = 15/33 (45%), Positives = 25/33 (75%)
Frame = +3
Query: 255 KVLVHNVKELEILMMQNRKYCAEIAHGVSSKKR 353
K+L+ N K+LE+L+ NR + E+AH +S++KR
Sbjct: 76 KLLITNEKDLELLLTNNRTFAGELAHNLSARKR 108
>UniRef50_Q9XFE3 Cluster: 60S ribosomal protein; n=1; Oryza
sativa|Rep: 60S ribosomal protein - Oryza sativa (Rice)
Length = 114
Score = 56.0 bits (129), Expect = 4e-07
Identities = 27/46 (58%), Positives = 34/46 (73%)
Frame = +2
Query: 32 KMAIRPVYRPTIVKKRTKRFIRHQSDRYDKLKRNWRKPRGIDNRVR 169
KMA+ P+ IVKKR K+F R SDRY LK +WR+P+GID+RVR
Sbjct: 10 KMAV-PLLTKKIVKKRVKQFKRPHSDRYIGLKTSWRRPKGIDSRVR 54
>UniRef50_P38061 Cluster: 60S ribosomal protein L32; n=39;
Eukaryota|Rep: 60S ribosomal protein L32 - Saccharomyces
cerevisiae (Baker's yeast)
Length = 130
Score = 56.0 bits (129), Expect = 4e-07
Identities = 25/43 (58%), Positives = 30/43 (69%)
Frame = +2
Query: 59 PTIVKKRTKRFIRHQSDRYDKLKRNWRKPRGIDNRVRSGSRVN 187
P IVKK TK+F RH SDRY ++ NWRK +GID+ VR R N
Sbjct: 7 PKIVKKHTKKFKRHHSDRYHRVAENWRKQKGIDSVVRRRFRGN 49
Score = 45.2 bits (102), Expect = 8e-04
Identities = 27/83 (32%), Positives = 42/83 (50%)
Frame = +1
Query: 169 QRFKGQYLMPNIGYGSNKKTRHMLPNGFRRS*FTMLKSWKS**CKTGSTAQRSLMVSLRR 348
+RF+G P IGYGSNKKT+ + P+G + +K ++ T + A +
Sbjct: 44 RRFRGNISQPKIGYGSNKKTKFLSPSGHKTFLVANVKDLETLTMHTKTYAAEIAHNISAK 103
Query: 349 SGS*FVERAQQLSIRVTNAAARL 417
+ + RA+ L I+VTN RL
Sbjct: 104 NRVVILARAKALGIKVTNPKGRL 126
Score = 43.2 bits (97), Expect = 0.003
Identities = 20/40 (50%), Positives = 27/40 (67%)
Frame = +3
Query: 261 LVHNVKELEILMMQNRKYCAEIAHGVSSKKRKLIRGKSPA 380
LV NVK+LE L M + Y AEIAH +S+K R +I ++ A
Sbjct: 75 LVANVKDLETLTMHTKTYAAEIAHNISAKNRVVILARAKA 114
>UniRef50_Q0J0S1 Cluster: Os09g0501200 protein; n=1; Oryza sativa
(japonica cultivar-group)|Rep: Os09g0501200 protein -
Oryza sativa subsp. japonica (Rice)
Length = 186
Score = 53.6 bits (123), Expect = 2e-06
Identities = 24/41 (58%), Positives = 30/41 (73%)
Frame = +2
Query: 47 PVYRPTIVKKRTKRFIRHQSDRYDKLKRNWRKPRGIDNRVR 169
P+ IVKKR K+F R SDRY LK +WR+P+GID+RVR
Sbjct: 64 PLLTKKIVKKRVKQFKRPHSDRYIGLKTSWRRPKGIDSRVR 104
Score = 51.2 bits (117), Expect = 1e-05
Identities = 21/30 (70%), Positives = 26/30 (86%)
Frame = +1
Query: 169 QRFKGQYLMPNIGYGSNKKTRHMLPNGFRR 258
++FKG LMPNIGYGS+KKTRH LPN F++
Sbjct: 105 RKFKGCTLMPNIGYGSDKKTRHYLPNKFKK 134
Score = 35.1 bits (77), Expect = 0.81
Identities = 15/25 (60%), Positives = 17/25 (68%)
Frame = +3
Query: 234 YAPKWIPKVLVHNVKELEILMMQNR 308
Y P K +VHNV ELE+LMM NR
Sbjct: 127 YLPNKFKKFVVHNVSELELLMMHNR 151
>UniRef50_P34040 Cluster: 60S ribosomal protein L32; n=1; Hypocrea
lixii|Rep: 60S ribosomal protein L32 - Trichoderma
harzianum (Hypocrea lixii)
Length = 137
Score = 53.6 bits (123), Expect = 2e-06
Identities = 22/35 (62%), Positives = 27/35 (77%)
Frame = +2
Query: 65 IVKKRTKRFIRHQSDRYDKLKRNWRKPRGIDNRVR 169
IVKK F RHQSDR+D++ +WRKP+GID RVR
Sbjct: 10 IVKKHKTTFARHQSDRFDRVGSSWRKPKGIDGRVR 44
Score = 42.3 bits (95), Expect = 0.005
Identities = 17/27 (62%), Positives = 21/27 (77%)
Frame = +1
Query: 169 QRFKGQYLMPNIGYGSNKKTRHMLPNG 249
+RF+G MP IGYGSNKKTR + P+G
Sbjct: 45 RRFRGTIRMPKIGYGSNKKTRFLTPSG 71
>UniRef50_Q9NGS3 Cluster: 60S ribosomal protein L32; n=8;
Trypanosomatidae|Rep: 60S ribosomal protein L32 -
Leishmania donovani
Length = 134
Score = 52.8 bits (121), Expect = 4e-06
Identities = 22/43 (51%), Positives = 30/43 (69%)
Frame = +2
Query: 41 IRPVYRPTIVKKRTKRFIRHQSDRYDKLKRNWRKPRGIDNRVR 169
++P IVKKRTKRF RH+ + + +L +WRKPRG D+ VR
Sbjct: 2 VKPTVSKAIVKKRTKRFTRHRYELFPQLSSSWRKPRGEDSPVR 44
Score = 43.6 bits (98), Expect = 0.002
Identities = 16/29 (55%), Positives = 25/29 (86%)
Frame = +1
Query: 169 QRFKGQYLMPNIGYGSNKKTRHMLPNGFR 255
+R+KGQ +MPN GYGS++ T+++ P+GFR
Sbjct: 45 RRYKGQKVMPNKGYGSDRATKYITPSGFR 73
Score = 42.3 bits (95), Expect = 0.005
Identities = 18/37 (48%), Positives = 28/37 (75%)
Frame = +3
Query: 264 VHNVKELEILMMQNRKYCAEIAHGVSSKKRKLIRGKS 374
++NV++L +L+MQNRKY I+H V ++KRK I K+
Sbjct: 78 INNVEDLYMLVMQNRKYAGVISHTVGARKRKAIARKA 114
>UniRef50_Q7R1L8 Cluster: GLP_28_64726_64316; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_28_64726_64316 - Giardia lamblia
ATCC 50803
Length = 136
Score = 52.8 bits (121), Expect = 4e-06
Identities = 22/43 (51%), Positives = 32/43 (74%)
Frame = +2
Query: 41 IRPVYRPTIVKKRTKRFIRHQSDRYDKLKRNWRKPRGIDNRVR 169
I P+ I+KKR +FIR QS+R+ ++K +WRKPRGID+ +R
Sbjct: 6 IHPLPHKIIIKKRKNKFIRFQSERFVRVKPSWRKPRGIDSPMR 48
Score = 52.8 bits (121), Expect = 4e-06
Identities = 33/91 (36%), Positives = 51/91 (56%), Gaps = 2/91 (2%)
Frame = +1
Query: 163 SPQR--FKGQYLMPNIGYGSNKKTRHMLPNGFRRS*FTMLKSWKS**CKTGSTAQRSLMV 336
SP R ++GQ M +IGYGS+K+TR MLP GF + + + K+ + A +
Sbjct: 45 SPMRHQYRGQRPMVSIGYGSDKETRFMLPCGFFKHRISTVHELKTLFMNNKTHAAQIAHG 104
Query: 337 SLRRSGS*FVERAQQLSIRVTNAAARLRSQE 429
RS +E A+++ +RV NA A+LR +E
Sbjct: 105 VSARSRKQILEEAKKMGVRVLNADAKLRKEE 135
>UniRef50_UPI00005A3317 Cluster: PREDICTED: similar to 60S ribosomal
protein L32; n=2; Canis lupus familiaris|Rep: PREDICTED:
similar to 60S ribosomal protein L32 - Canis familiaris
Length = 218
Score = 52.0 bits (119), Expect = 7e-06
Identities = 36/88 (40%), Positives = 46/88 (52%), Gaps = 1/88 (1%)
Frame = +1
Query: 175 FKGQYLMPNIGYGSNKKTRHMLPNGFRRS*FTMLKSWK-S**CKTGSTAQRSLMVSLRRS 351
FKG LMPNI Y S++KT+ MLP+GF++ K K C S ++
Sbjct: 131 FKGPILMPNIDYMSHEKTKPMLPSGFQKLLTHNGKELKVLLMCNNKSHCAEIAHNVFSKN 190
Query: 352 GS*FVERAQQLSIRVTNAAARLRSQENE 435
RA QL+I VTN A LRS+ENE
Sbjct: 191 CRTSAGRAAQLAIEVTNPNASLRSEENE 218
Score = 45.2 bits (102), Expect = 8e-04
Identities = 22/46 (47%), Positives = 30/46 (65%), Gaps = 1/46 (2%)
Frame = +3
Query: 240 PKWIPKVLVHNVKELEILMMQNRK-YCAEIAHGVSSKKRKLIRGKS 374
P K+L HN KEL++L+M N K +CAEIAH V SK + G++
Sbjct: 153 PSGFQKLLTHNGKELKVLLMCNNKSHCAEIAHNVFSKNCRTSAGRA 198
Score = 40.7 bits (91), Expect = 0.016
Identities = 19/43 (44%), Positives = 26/43 (60%)
Frame = +2
Query: 38 AIRPVYRPTIVKKRTKRFIRHQSDRYDKLKRNWRKPRGIDNRV 166
A+RP+ +P I K + R K+K NWR+PRGID+RV
Sbjct: 85 ALRPLGKPKIFKMGPRSSSGTSQIRCVKMKHNWREPRGIDDRV 127
>UniRef50_Q8SS18 Cluster: 60S ribosomal protein L32; n=1;
Encephalitozoon cuniculi|Rep: 60S ribosomal protein L32
- Encephalitozoon cuniculi
Length = 139
Score = 50.4 bits (115), Expect = 2e-05
Identities = 18/32 (56%), Positives = 27/32 (84%)
Frame = +2
Query: 74 KRTKRFIRHQSDRYDKLKRNWRKPRGIDNRVR 169
++ K+FIRH SDRY ++K +WR+P GID++VR
Sbjct: 19 RKNKKFIRHHSDRYKRVKPSWRRPHGIDSKVR 50
Score = 39.1 bits (87), Expect = 0.050
Identities = 17/38 (44%), Positives = 23/38 (60%)
Frame = +3
Query: 240 PKWIPKVLVHNVKELEILMMQNRKYCAEIAHGVSSKKR 353
P + KV + N+ +L L NR YC EIAH V ++KR
Sbjct: 75 PNGLRKVRIFNINDLTPLTSLNRFYCGEIAHAVGARKR 112
Score = 36.3 bits (80), Expect = 0.35
Identities = 15/30 (50%), Positives = 21/30 (70%)
Frame = +1
Query: 169 QRFKGQYLMPNIGYGSNKKTRHMLPNGFRR 258
+R KG+ MP+I Y K+ RH+LPNG R+
Sbjct: 51 KRCKGEREMPSIKYKKPKEIRHLLPNGLRK 80
>UniRef50_Q96BP1 Cluster: RPL32P3 protein; n=2; Catarrhini|Rep:
RPL32P3 protein - Homo sapiens (Human)
Length = 82
Score = 49.2 bits (112), Expect = 5e-05
Identities = 21/30 (70%), Positives = 26/30 (86%)
Frame = +2
Query: 38 AIRPVYRPTIVKKRTKRFIRHQSDRYDKLK 127
A+R + +P IVKKRTK+FIRHQSDRY K+K
Sbjct: 3 ALRSLVKPKIVKKRTKKFIRHQSDRYVKIK 32
>UniRef50_A2F2J1 Cluster: Ribosomal protein L32, putative; n=5;
Trichomonas vaginalis G3|Rep: Ribosomal protein L32,
putative - Trichomonas vaginalis G3
Length = 150
Score = 44.8 bits (101), Expect = 0.001
Identities = 30/88 (34%), Positives = 47/88 (53%), Gaps = 1/88 (1%)
Frame = +1
Query: 169 QRFKGQYLMPNIGYGSNKKTRHMLPNGFRRS*FTMLKSWKS**CK-TGSTAQRSLMVSLR 345
++++G L P+ G+GS+K+TR MLPNGF LK K T A S V +
Sbjct: 63 RKYRGTPLHPSAGFGSDKETRFMLPNGFIPVIVRSLKDLDMLLTKNTTHGAMISAQVGAK 122
Query: 346 RSGS*FVERAQQLSIRVTNAAARLRSQE 429
+++AQ+L+I + N A + +QE
Sbjct: 123 LQQE-IIKKAQELNIEILNQARKHVAQE 149
>UniRef50_Q9SEV3 Cluster: 60S ribosomal protein L32; n=1; Guillardia
theta|Rep: 60S ribosomal protein L32 - Guillardia theta
(Cryptomonas phi)
Length = 119
Score = 41.9 bits (94), Expect = 0.007
Identities = 17/46 (36%), Positives = 27/46 (58%)
Frame = +2
Query: 68 VKKRTKRFIRHQSDRYDKLKRNWRKPRGIDNRVRSGSRVNT*CPTL 205
+ K K F RH++ +Y ++ WRKP+GID+ VR + T P +
Sbjct: 4 LNKTKKNFKRHEAKKYKRINAGWRKPKGIDSCVRRRFKGKTKMPNI 49
Score = 39.1 bits (87), Expect = 0.050
Identities = 16/27 (59%), Positives = 22/27 (81%)
Frame = +1
Query: 169 QRFKGQYLMPNIGYGSNKKTRHMLPNG 249
+RFKG+ MPNIGYGS+KK+R++ G
Sbjct: 38 RRFKGKTKMPNIGYGSSKKSRYLGKTG 64
>UniRef50_Q3LWI6 Cluster: Ribosomal protein L32; n=1; Bigelowiella
natans|Rep: Ribosomal protein L32 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 106
Score = 41.5 bits (93), Expect = 0.009
Identities = 25/87 (28%), Positives = 46/87 (52%), Gaps = 1/87 (1%)
Frame = +2
Query: 83 KRFIRHQSDRYDKLKRNWRKPRGIDNRVRSGSRVNT*CPTLVTVPTRRPVICSQMDSEGP 262
K F++H S ++K+ WRKP GID+++R ++ P + ++R +++ G
Sbjct: 3 KSFLKHNSKSLIRIKKKWRKPIGIDSKIRKRTKGAPKTPKIGYGSSKR---IKSLNATGL 59
Query: 263 SSQC*RAGNLDDAKQE-VLRRDRSWCL 340
+ NL+D K +L+R S+CL
Sbjct: 60 KTI--HVFNLNDIKSSIILKRSYSYCL 84
>UniRef50_UPI00015537AF Cluster: PREDICTED: hypothetical protein;
n=2; Mus musculus|Rep: PREDICTED: hypothetical protein -
Mus musculus
Length = 125
Score = 41.1 bits (92), Expect = 0.012
Identities = 18/46 (39%), Positives = 29/46 (63%)
Frame = +2
Query: 38 AIRPVYRPTIVKKRTKRFIRHQSDRYDKLKRNWRKPRGIDNRVRSG 175
A++P+ +P I +KR+K+ HQSD ++K W++PR I V G
Sbjct: 3 ALQPLVKPKISRKRSKKCTWHQSDGCVRMKPAWQEPRSISTWVWGG 48
Score = 29.9 bits (64), Expect(2) = 0.078
Identities = 14/23 (60%), Positives = 18/23 (78%)
Frame = +1
Query: 364 VERAQQLSIRVTNAAARLRSQEN 432
VERA L+IRVT+A ARL ++N
Sbjct: 85 VERAAWLAIRVTDANARLHGEDN 107
Score = 27.9 bits (59), Expect(2) = 0.078
Identities = 14/22 (63%), Positives = 16/22 (72%)
Frame = +1
Query: 178 KGQYLMPNIGYGSNKKTRHMLP 243
KG+ LM IGYG NK T+ MLP
Sbjct: 50 KGKVLMLRIGYG-NKMTKLMLP 70
>UniRef50_A0RUF7 Cluster: Ribosomal protein L32E; n=2;
Thermoprotei|Rep: Ribosomal protein L32E - Cenarchaeum
symbiosum
Length = 134
Score = 39.5 bits (88), Expect = 0.038
Identities = 16/34 (47%), Positives = 22/34 (64%)
Frame = +2
Query: 68 VKKRTKRFIRHQSDRYDKLKRNWRKPRGIDNRVR 169
V K F+R +S RY ++K WRKP+G+DN R
Sbjct: 14 VAKHRPDFVRAESWRYKRIKPAWRKPKGVDNHQR 47
>UniRef50_Q1RQD0 Cluster: Ribosomal protein L32; n=1; Nyctotherus
ovalis|Rep: Ribosomal protein L32 - Nyctotherus ovalis
Length = 105
Score = 39.1 bits (87), Expect = 0.050
Identities = 17/49 (34%), Positives = 31/49 (63%)
Frame = +3
Query: 249 IPKVLVHNVKELEILMMQNRKYCAEIAHGVSSKKRKLIRGKSPAAQHQS 395
+ K ++ K+LE+L+M NR++ EIAH +S+K + GKS + ++
Sbjct: 44 LKKFVITCAKDLELLLMHNREFMGEIAHNLSAKTHQGDCGKSERVEREA 92
Score = 36.3 bits (80), Expect = 0.35
Identities = 16/33 (48%), Positives = 20/33 (60%)
Frame = +1
Query: 181 GQYLMPNIGYGSNKKTRHMLPNGFRRS*FTMLK 279
G MP GYGSN++TR ML NG ++ T K
Sbjct: 21 GTIRMPGAGYGSNRQTRFMLANGLKKFVITCAK 53
Score = 31.9 bits (69), Expect = 7.5
Identities = 12/16 (75%), Positives = 14/16 (87%)
Frame = +2
Query: 122 LKRNWRKPRGIDNRVR 169
+K +WRKP GIDNRVR
Sbjct: 1 MKTSWRKPGGIDNRVR 16
>UniRef50_Q9YF92 Cluster: 50S ribosomal protein L32e; n=2;
Desulfurococcales|Rep: 50S ribosomal protein L32e -
Aeropyrum pernix
Length = 145
Score = 36.7 bits (81), Expect = 0.27
Identities = 18/40 (45%), Positives = 25/40 (62%), Gaps = 2/40 (5%)
Frame = +2
Query: 56 RPTIVKKRTKRFIRHQSDRYDKLKRN--WRKPRGIDNRVR 169
R I K RF+R+ S R+ K +R WRKP+G DN++R
Sbjct: 30 RRLIASKSRHRFLRYLSWRFWKFERRDYWRKPKGNDNKMR 69
>UniRef50_Q975J7 Cluster: 50S ribosomal protein L32e; n=3;
Sulfolobus|Rep: 50S ribosomal protein L32e - Sulfolobus
tokodaii
Length = 131
Score = 35.9 bits (79), Expect = 0.46
Identities = 14/36 (38%), Positives = 26/36 (72%), Gaps = 2/36 (5%)
Frame = +2
Query: 68 VKKRTKRFIRHQSDRYDKLKRN--WRKPRGIDNRVR 169
++++ +F+R+ D++ ++ R WRKP+GIDN VR
Sbjct: 17 IREKKIKFLRYDWDKFYRIGRQETWRKPKGIDNPVR 52
>UniRef50_Q9UX90 Cluster: 50S ribosomal protein L32e; n=2;
Sulfolobaceae|Rep: 50S ribosomal protein L32e -
Sulfolobus solfataricus
Length = 138
Score = 35.5 bits (78), Expect = 0.61
Identities = 20/56 (35%), Positives = 32/56 (57%), Gaps = 2/56 (3%)
Frame = +2
Query: 68 VKKRTKRFIRHQSDRYDKLKRN--WRKPRGIDNRVRSGSRVNT*CPTLVTVPTRRP 229
+K + +F+R+ SD++ +L R WR+P G DN+ R R P +V+V R P
Sbjct: 20 LKAKKPKFLRYDSDKFYRLGRQEKWRRPYGRDNKTRLKVRG---FPAIVSVGYRLP 72
>UniRef50_A4RVQ1 Cluster: Predicted protein; n=1; Ostreococcus
lucimarinus CCE9901|Rep: Predicted protein -
Ostreococcus lucimarinus CCE9901
Length = 51
Score = 35.1 bits (77), Expect = 0.81
Identities = 14/28 (50%), Positives = 21/28 (75%)
Frame = +2
Query: 41 IRPVYRPTIVKKRTKRFIRHQSDRYDKL 124
+ P+ + IVKKRTK F ++QSDRY ++
Sbjct: 2 VTPLIKHKIVKKRTKTFKKYQSDRYKRI 29
>UniRef50_UPI00006CB715 Cluster: TPR Domain containing protein; n=1;
Tetrahymena thermophila SB210|Rep: TPR Domain containing
protein - Tetrahymena thermophila SB210
Length = 964
Score = 34.7 bits (76), Expect = 1.1
Identities = 25/111 (22%), Positives = 56/111 (50%), Gaps = 3/111 (2%)
Frame = +2
Query: 71 KKRTKRFIRHQSDRYDKLKRNWRKPRGIDNRVRSGSRVNT*CPTLVTVPTRRPVICSQMD 250
+K+ + R + + Y++ K+ RK +G++N S + C +PT + + C++
Sbjct: 52 RKKEQEEERLRMEEYER-KKQGRKGKGVENNYLSFCKF---CFWEYELPTPQCIRCNKDT 107
Query: 251 SEGPSSQC*RAGNLDDAKQEVLRRD---RSWCLFEEAEADSWKEPSSSASE 394
G +DD K+ ++RD + W L+++ ++ WK+ S++ S+
Sbjct: 108 ITYDQRMEELKGKVDDYKKHKVKRDERKKKWELWKKTQSMLWKKTSTNYSK 158
>UniRef50_Q1VH30 Cluster: 50S ribosomal protein L32e; n=3; cellular
organisms|Rep: 50S ribosomal protein L32e -
Psychroflexus torquis ATCC 700755
Length = 238
Score = 34.3 bits (75), Expect = 1.4
Identities = 16/34 (47%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Frame = +2
Query: 71 KKRTKRFIRHQSDRYDKLKRN-WRKPRGIDNRVR 169
KK+T F R + RY +L R+ WR P G+DN+ R
Sbjct: 124 KKKTPSFRRTEWFRYKRLSRSGWRAPHGMDNKQR 157
>UniRef50_O26128 Cluster: 50S ribosomal protein L32e; n=3;
Methanobacteriaceae|Rep: 50S ribosomal protein L32e -
Methanobacterium thermoautotrophicum
Length = 108
Score = 33.5 bits (73), Expect = 2.5
Identities = 17/49 (34%), Positives = 26/49 (53%)
Frame = +2
Query: 83 KRFIRHQSDRYDKLKRNWRKPRGIDNRVRSGSRVNT*CPTLVTVPTRRP 229
K+F R + RY KL WR+PRG +++R R P + + R+P
Sbjct: 3 KKFKRQEYARYKKLGEKWRRPRGRTSKMR---RYEKGKPAMPAIGYRKP 48
>UniRef50_Q9J861 Cluster: ORF76 cg30; n=1; Spodoptera exigua
MNPV|Rep: ORF76 cg30 - Spodoptera exigua MNPV
Length = 461
Score = 33.1 bits (72), Expect = 3.3
Identities = 22/70 (31%), Positives = 33/70 (47%)
Frame = +2
Query: 182 VNT*CPTLVTVPTRRPVICSQMDSEGPSSQC*RAGNLDDAKQEVLRRDRSWCLFEEAEAD 361
V++ P+L P++RP I + PSS + N KQ LR+ + C F + E
Sbjct: 132 VSSYSPSLTPSPSKRPQIAYVQPTLSPSSSPSKQQNNKLYKQPTLRQVFNECFFPKLELP 191
Query: 362 SWKEPSSSAS 391
K +SS S
Sbjct: 192 KTKTSTSSTS 201
>UniRef50_A3ZNA7 Cluster: Probable RNA polymerase sigma-E factor;
n=1; Blastopirellula marina DSM 3645|Rep: Probable RNA
polymerase sigma-E factor - Blastopirellula marina DSM
3645
Length = 209
Score = 33.1 bits (72), Expect = 3.3
Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Frame = +3
Query: 126 RGIGVNLEVLTTESAAVQGSILDAQH-WLRFQQEDPSYAPKWIPKVLVHNVKE 281
RG+G L S VQGS+L+AQ + RF S W+ +++ HN+ +
Sbjct: 47 RGLGDALSAKVDASDIVQGSLLEAQRDFDRFTGNSESELKAWLRRLVKHNLAD 99
>UniRef50_Q39IF6 Cluster: TPR repeat protein; n=26;
Burkholderia|Rep: TPR repeat protein - Burkholderia sp.
(strain 383) (Burkholderia cepacia (strain ATCC 17760/
NCIB 9086 / R18194))
Length = 390
Score = 32.7 bits (71), Expect = 4.3
Identities = 29/115 (25%), Positives = 54/115 (46%), Gaps = 7/115 (6%)
Frame = +3
Query: 105 RIAMTNLRGIGVNLEVLTTESAAVQGSILDA-QHWLRFQQEDPSYAPKWIPKV------L 263
R+A+T + V VL+ ++A +G+ A +HW R + ++P+Y P K+ L
Sbjct: 204 RLALT-VNPQNVRATVLSGDAAEAEGNHAAAIEHWKRVEAQNPAYLPLVADKLMKAYVAL 262
Query: 264 VHNVKELEILMMQNRKYCAEIAHGVSSKKRKLIRGKSPAAQHQSDECGRSPPLPG 428
N + E+LM +Y + ++ + +RG+ A + +SP L G
Sbjct: 263 GKNAEGAELLMGYIDRYPSNDLLDIAYQHIAGLRGQDAAHTLARTQMEKSPNLSG 317
>UniRef50_Q9FJ30 Cluster: Putative F-box/LRR-repeat protein
At5g41840; n=4; Arabidopsis thaliana|Rep: Putative
F-box/LRR-repeat protein At5g41840 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 540
Score = 32.7 bits (71), Expect = 4.3
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = +3
Query: 225 DPSYAPKWIPKVLVHNVKELEILMMQNRKYC 317
D S+ +WIPKVL V ++++ + +R YC
Sbjct: 110 DQSWVLEWIPKVLKRGVLDIDLHITSSRNYC 140
>UniRef50_Q6PB51 Cluster: Coiled-coil domain-containing protein 117;
n=8; Amniota|Rep: Coiled-coil domain-containing protein
117 - Mus musculus (Mouse)
Length = 277
Score = 32.7 bits (71), Expect = 4.3
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = +2
Query: 167 RSGSRVNT*CPTLVTVPTRRPVICSQMDSEGPSSQC 274
R G VNT CP+ +++P+ V+C +MD QC
Sbjct: 106 REGHGVNT-CPSSLSMPSMLDVVCEEMDQTTGEPQC 140
>UniRef50_UPI00015BB237 Cluster: LSU ribosomal protein L32E; n=1;
Ignicoccus hospitalis KIN4/I|Rep: LSU ribosomal protein
L32E - Ignicoccus hospitalis KIN4/I
Length = 148
Score = 32.3 bits (70), Expect = 5.7
Identities = 19/43 (44%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Frame = +3
Query: 240 PKWIPKVLVHNVKELEILMMQNRKYCAEIAHGVSSKKR-KLIR 365
P + V+VHNVKELE + K+ IA V KKR ++IR
Sbjct: 92 PSGLEPVIVHNVKELE--KVDKEKHIVYIASSVGKKKRAEIIR 132
Score = 31.5 bits (68), Expect = 10.0
Identities = 15/29 (51%), Positives = 20/29 (68%), Gaps = 2/29 (6%)
Frame = +2
Query: 89 FIRHQSDRYDKLKRN--WRKPRGIDNRVR 169
FIR+ RY +L+R WRKP+G DN+ R
Sbjct: 39 FIRYHWWRYFRLERGYKWRKPKGNDNKSR 67
>UniRef50_A1FY02 Cluster: Putative uncharacterized protein; n=1;
Stenotrophomonas maltophilia R551-3|Rep: Putative
uncharacterized protein - Stenotrophomonas maltophilia
R551-3
Length = 437
Score = 32.3 bits (70), Expect = 5.7
Identities = 15/32 (46%), Positives = 20/32 (62%)
Frame = +3
Query: 159 TESAAVQGSILDAQHWLRFQQEDPSYAPKWIP 254
T+ AA +L AQ WLR Q EDP+ A + +P
Sbjct: 355 TQDAAAMLRLLGAQRWLRQQAEDPTEALQRLP 386
>UniRef50_A7ANX2 Cluster: Elongation factor Tu GTP binding domain
containing protein; n=1; Babesia bovis|Rep: Elongation
factor Tu GTP binding domain containing protein -
Babesia bovis
Length = 601
Score = 32.3 bits (70), Expect = 5.7
Identities = 20/89 (22%), Positives = 42/89 (47%)
Frame = +2
Query: 8 VAFLKETYKMAIRPVYRPTIVKKRTKRFIRHQSDRYDKLKRNWRKPRGIDNRVRSGSRVN 187
V L++ + +R + + + H D ++ K+ ++ ++R+ S+
Sbjct: 325 VEALRQVARKTVRGSHTQNSIMTPPDAIVGHIFDMWENSKKQVGCSCFMETKIRTPSK-- 382
Query: 188 T*CPTLVTVPTRRPVICSQMDSEGPSSQC 274
LV++P+ PV CS+M S P++QC
Sbjct: 383 -----LVSLPSGNPVTCSEMSSLLPTNQC 406
>UniRef50_A3DNC4 Cluster: Ribosomal protein L32e; n=1;
Staphylothermus marinus F1|Rep: Ribosomal protein L32e -
Staphylothermus marinus (strain ATCC 43588 / DSM 3639 /
F1)
Length = 136
Score = 32.3 bits (70), Expect = 5.7
Identities = 20/66 (30%), Positives = 32/66 (48%), Gaps = 2/66 (3%)
Frame = +2
Query: 68 VKKRTKRFIRHQSDRYDKLKRN--WRKPRGIDNRVRSGSRVNT*CPTLVTVPTRRPVICS 241
+K + F+RH + K + + WRKP+G DN++R + P LV V R P +
Sbjct: 17 LKSKKPEFLRHLWWKKPKFRNDPKWRKPKGTDNKMRLKKKG---YPPLVEVGYRGPKLVR 73
Query: 242 QMDSEG 259
+ G
Sbjct: 74 GLHPSG 79
>UniRef50_A5AR50 Cluster: Putative uncharacterized protein; n=2;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 856
Score = 31.9 bits (69), Expect = 7.5
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = -1
Query: 408 GRIRHSDAELLGSFHESASASSKRHHERSLRSTSCFASS 292
G+I H + HE A AS+++H E L +CF +S
Sbjct: 133 GQIGHMERICKSQQHEEAKASTEQHQEEQLFVATCFTTS 171
>UniRef50_A7DNZ6 Cluster: Putative uncharacterized protein; n=1;
Candidatus Nitrosopumilus maritimus SCM1|Rep: Putative
uncharacterized protein - Candidatus Nitrosopumilus
maritimus SCM1
Length = 483
Score = 31.5 bits (68), Expect = 10.0
Identities = 16/57 (28%), Positives = 29/57 (50%)
Frame = -3
Query: 193 SSIDP*TAADSVVNTSRFTPIPLKFVIAIRLMPDKSLRPLFDDCRPVNRSYSHLVCF 23
S+IDP D ++++ PIP+ +AI+ + D DC ++ S L+C+
Sbjct: 93 SNIDPDDDNDGILDSRDAVPIPISEELAIKYLED------IQDCTKIDEGSSRLLCY 143
>UniRef50_P54010 Cluster: 50S ribosomal protein L32e; n=10;
Euryarchaeota|Rep: 50S ribosomal protein L32e -
Methanococcus jannaschii
Length = 146
Score = 31.5 bits (68), Expect = 10.0
Identities = 11/34 (32%), Positives = 22/34 (64%)
Frame = +2
Query: 68 VKKRTKRFIRHQSDRYDKLKRNWRKPRGIDNRVR 169
+K + FIR ++ R+ +L WR+P+G +++R
Sbjct: 11 LKMKKPDFIRQEAHRHKRLGEKWRRPKGRHSKMR 44
>UniRef50_Q2W4D7 Cluster: Lipid-A-disaccharide synthase; n=4;
Rhodospirillaceae|Rep: Lipid-A-disaccharide synthase -
Magnetospirillum magneticum (strain AMB-1 / ATCC 700264)
Length = 390
Score = 31.5 bits (68), Expect = 10.0
Identities = 14/33 (42%), Positives = 22/33 (66%), Gaps = 2/33 (6%)
Frame = -3
Query: 148 SRFTPIPLKFVIAIRLMPDKSLRP--LFDDCRP 56
+RF + LKFV + ++ D+++ P L DDCRP
Sbjct: 299 TRFLGLSLKFVTLVNILVDEAVMPELLQDDCRP 331
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 457,886,557
Number of Sequences: 1657284
Number of extensions: 8894721
Number of successful extensions: 28238
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 27429
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28223
length of database: 575,637,011
effective HSP length: 94
effective length of database: 419,852,315
effective search space used: 26870548160
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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