Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= psV30412.Seq
(477 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X03342-1|CAA27048.1| 135|Homo sapiens protein ( Human mRNA for ... 86 7e-17
BC070209-1|AAH70209.1| 135|Homo sapiens ribosomal protein L32 p... 86 7e-17
BC011514-1|AAH11514.1| 135|Homo sapiens ribosomal protein L32 p... 86 7e-17
AB061831-1|BAB79469.1| 135|Homo sapiens ribosomal protein L32 p... 86 7e-17
BC015974-1|AAH15974.1| 107|Homo sapiens RPS29 protein protein. 58 2e-08
BC053996-1|AAH53996.1| 33|Homo sapiens RPL32P3 protein protein. 51 2e-06
BC015389-1|AAH15389.1| 82|Homo sapiens RPL32P3 protein protein. 49 7e-06
BC006224-1|AAH06224.1| 194|Homo sapiens MGC11257 protein protein. 29 6.3
AF495721-1|AAQ06675.1| 194|Homo sapiens unknown protein. 29 6.3
BC094811-1|AAH94811.1| 602|Homo sapiens ADAMTSL4 protein protein. 29 8.3
BC071852-1|AAH71852.1| 602|Homo sapiens ADAMTSL4 protein protein. 29 8.3
BC064425-1|AAH64425.1| 343|Homo sapiens high mobility group AT-... 29 8.3
BC050666-1|AAH50666.1| 343|Homo sapiens ZNHIT4 protein protein. 29 8.3
BC027478-1|AAH27478.1| 424|Homo sapiens ADAMTSL4 protein protein. 29 8.3
AL356356-13|CAI15500.2| 1074|Homo sapiens ADAMTS-like 4 protein. 29 8.3
AF217974-1|AAG17217.1| 237|Homo sapiens unknown protein. 29 8.3
AB054538-1|BAB21111.1| 343|Homo sapiens PAPA-1 protein. 29 8.3
>X03342-1|CAA27048.1| 135|Homo sapiens protein ( Human mRNA for
ribosomal protein L32. ).
Length = 135
Score = 85.8 bits (203), Expect = 7e-17
Identities = 49/90 (54%), Positives = 61/90 (67%), Gaps = 1/90 (1%)
Frame = +1
Query: 169 QRFKGQYLMPNIGYGSNKKTRHMLPNGFRRS*FTMLKSWK-S**CKTGSTAQRSLMVSLR 345
+RFKGQ LMPNIGYGSNKKT+HMLP+GFR+ +K + C A+ + VS +
Sbjct: 47 RRFKGQILMPNIGYGSNKKTKHMLPSGFRKFLVHNVKELEVLLMCNKSYCAEIAHNVSSK 106
Query: 346 RSGS*FVERAQQLSIRVTNAAARLRSQENE 435
+ VERA QL+IRVTN ARLRS+ENE
Sbjct: 107 NRKA-IVERAAQLAIRVTNPNARLRSEENE 135
Score = 84.6 bits (200), Expect = 2e-16
Identities = 36/44 (81%), Positives = 41/44 (93%)
Frame = +2
Query: 38 AIRPVYRPTIVKKRTKRFIRHQSDRYDKLKRNWRKPRGIDNRVR 169
A+RP+ +P IVKKRTK+FIRHQSDRY K+KRNWRKPRGIDNRVR
Sbjct: 3 ALRPLVKPKIVKKRTKKFIRHQSDRYVKIKRNWRKPRGIDNRVR 46
>BC070209-1|AAH70209.1| 135|Homo sapiens ribosomal protein L32
protein.
Length = 135
Score = 85.8 bits (203), Expect = 7e-17
Identities = 49/90 (54%), Positives = 61/90 (67%), Gaps = 1/90 (1%)
Frame = +1
Query: 169 QRFKGQYLMPNIGYGSNKKTRHMLPNGFRRS*FTMLKSWK-S**CKTGSTAQRSLMVSLR 345
+RFKGQ LMPNIGYGSNKKT+HMLP+GFR+ +K + C A+ + VS +
Sbjct: 47 RRFKGQILMPNIGYGSNKKTKHMLPSGFRKFLVHNVKELEVLLMCNKSYCAEIAHNVSSK 106
Query: 346 RSGS*FVERAQQLSIRVTNAAARLRSQENE 435
+ VERA QL+IRVTN ARLRS+ENE
Sbjct: 107 NRKA-IVERAAQLAIRVTNPNARLRSEENE 135
Score = 84.6 bits (200), Expect = 2e-16
Identities = 36/44 (81%), Positives = 41/44 (93%)
Frame = +2
Query: 38 AIRPVYRPTIVKKRTKRFIRHQSDRYDKLKRNWRKPRGIDNRVR 169
A+RP+ +P IVKKRTK+FIRHQSDRY K+KRNWRKPRGIDNRVR
Sbjct: 3 ALRPLVKPKIVKKRTKKFIRHQSDRYVKIKRNWRKPRGIDNRVR 46
>BC011514-1|AAH11514.1| 135|Homo sapiens ribosomal protein L32
protein.
Length = 135
Score = 85.8 bits (203), Expect = 7e-17
Identities = 49/90 (54%), Positives = 61/90 (67%), Gaps = 1/90 (1%)
Frame = +1
Query: 169 QRFKGQYLMPNIGYGSNKKTRHMLPNGFRRS*FTMLKSWK-S**CKTGSTAQRSLMVSLR 345
+RFKGQ LMPNIGYGSNKKT+HMLP+GFR+ +K + C A+ + VS +
Sbjct: 47 RRFKGQILMPNIGYGSNKKTKHMLPSGFRKFLVHNVKELEVLLMCNKSYCAEIAHNVSSK 106
Query: 346 RSGS*FVERAQQLSIRVTNAAARLRSQENE 435
+ VERA QL+IRVTN ARLRS+ENE
Sbjct: 107 NRKA-IVERAAQLAIRVTNPNARLRSEENE 135
Score = 84.6 bits (200), Expect = 2e-16
Identities = 36/44 (81%), Positives = 41/44 (93%)
Frame = +2
Query: 38 AIRPVYRPTIVKKRTKRFIRHQSDRYDKLKRNWRKPRGIDNRVR 169
A+RP+ +P IVKKRTK+FIRHQSDRY K+KRNWRKPRGIDNRVR
Sbjct: 3 ALRPLVKPKIVKKRTKKFIRHQSDRYVKIKRNWRKPRGIDNRVR 46
>AB061831-1|BAB79469.1| 135|Homo sapiens ribosomal protein L32
protein.
Length = 135
Score = 85.8 bits (203), Expect = 7e-17
Identities = 49/90 (54%), Positives = 61/90 (67%), Gaps = 1/90 (1%)
Frame = +1
Query: 169 QRFKGQYLMPNIGYGSNKKTRHMLPNGFRRS*FTMLKSWK-S**CKTGSTAQRSLMVSLR 345
+RFKGQ LMPNIGYGSNKKT+HMLP+GFR+ +K + C A+ + VS +
Sbjct: 47 RRFKGQILMPNIGYGSNKKTKHMLPSGFRKFLVHNVKELEVLLMCNKSYCAEIAHNVSSK 106
Query: 346 RSGS*FVERAQQLSIRVTNAAARLRSQENE 435
+ VERA QL+IRVTN ARLRS+ENE
Sbjct: 107 NRKA-IVERAAQLAIRVTNPNARLRSEENE 135
Score = 84.6 bits (200), Expect = 2e-16
Identities = 36/44 (81%), Positives = 41/44 (93%)
Frame = +2
Query: 38 AIRPVYRPTIVKKRTKRFIRHQSDRYDKLKRNWRKPRGIDNRVR 169
A+RP+ +P IVKKRTK+FIRHQSDRY K+KRNWRKPRGIDNRVR
Sbjct: 3 ALRPLVKPKIVKKRTKKFIRHQSDRYVKIKRNWRKPRGIDNRVR 46
>BC015974-1|AAH15974.1| 107|Homo sapiens RPS29 protein protein.
Length = 107
Score = 58.0 bits (134), Expect = 2e-08
Identities = 35/85 (41%), Positives = 47/85 (55%), Gaps = 2/85 (2%)
Frame = +3
Query: 114 MTNLRGIGVNLEVLTTESAAVQGSILDAQHWLRF--QQEDPSYAPKWIPKVLVHNVKELE 287
M+ LR G N EVLTT ++G + + + ++ P K LVHNVKELE
Sbjct: 1 MSKLRVTGGNTEVLTT--GFIEGLRARSMPNIGYGRNKKTKHILPSGFWKFLVHNVKELE 58
Query: 288 ILMMQNRKYCAEIAHGVSSKKRKLI 362
+L++ N+ YC EI H VSSK K I
Sbjct: 59 VLLVSNKSYCVEITHDVSSKNCKAI 83
Score = 54.0 bits (124), Expect = 3e-07
Identities = 33/81 (40%), Positives = 44/81 (54%)
Frame = +1
Query: 193 MPNIGYGSNKKTRHMLPNGFRRS*FTMLKSWKS**CKTGSTAQRSLMVSLRRSGS*FVER 372
MPNIGYG NKKT+H+LP+GF + +K + S ++ +ER
Sbjct: 27 MPNIGYGRNKKTKHILPSGFWKFLVHNVKELEVLLVSNKSYCVEITHDVSSKNCKAILER 86
Query: 373 AQQLSIRVTNAAARLRSQENE 435
A Q+ IRVTNA A L S E+E
Sbjct: 87 AAQVVIRVTNANASLHSAESE 107
>BC053996-1|AAH53996.1| 33|Homo sapiens RPL32P3 protein protein.
Length = 33
Score = 51.2 bits (117), Expect = 2e-06
Identities = 22/31 (70%), Positives = 27/31 (87%)
Frame = +2
Query: 38 AIRPVYRPTIVKKRTKRFIRHQSDRYDKLKR 130
A+R + +P IVKKRTK+FIRHQSDRY K+KR
Sbjct: 3 ALRSLVKPKIVKKRTKKFIRHQSDRYVKIKR 33
>BC015389-1|AAH15389.1| 82|Homo sapiens RPL32P3 protein protein.
Length = 82
Score = 49.2 bits (112), Expect = 7e-06
Identities = 21/30 (70%), Positives = 26/30 (86%)
Frame = +2
Query: 38 AIRPVYRPTIVKKRTKRFIRHQSDRYDKLK 127
A+R + +P IVKKRTK+FIRHQSDRY K+K
Sbjct: 3 ALRSLVKPKIVKKRTKKFIRHQSDRYVKIK 32
>BC006224-1|AAH06224.1| 194|Homo sapiens MGC11257 protein protein.
Length = 194
Score = 29.5 bits (63), Expect = 6.3
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = +3
Query: 333 GVSSKKRKLIRGKSPAAQHQSDECGRSPPLPG 428
G+ + R+L K+ A + DE G PPLPG
Sbjct: 150 GLQGRARELTVQKAEALMRELDEEGSDPPLPG 181
>AF495721-1|AAQ06675.1| 194|Homo sapiens unknown protein.
Length = 194
Score = 29.5 bits (63), Expect = 6.3
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = +3
Query: 333 GVSSKKRKLIRGKSPAAQHQSDECGRSPPLPG 428
G+ + R+L K+ A + DE G PPLPG
Sbjct: 150 GLQGRARELTVQKAEALMRELDEEGSDPPLPG 181
>BC094811-1|AAH94811.1| 602|Homo sapiens ADAMTSL4 protein protein.
Length = 602
Score = 29.1 bits (62), Expect = 8.3
Identities = 13/28 (46%), Positives = 14/28 (50%)
Frame = -1
Query: 309 SCFASSRFPAL*HCELGPSESIWEHMTG 226
SC SR P + C LGP E W TG
Sbjct: 418 SCPTGSRPPDMRACSLGPCERTWRWYTG 445
>BC071852-1|AAH71852.1| 602|Homo sapiens ADAMTSL4 protein protein.
Length = 602
Score = 29.1 bits (62), Expect = 8.3
Identities = 13/28 (46%), Positives = 14/28 (50%)
Frame = -1
Query: 309 SCFASSRFPAL*HCELGPSESIWEHMTG 226
SC SR P + C LGP E W TG
Sbjct: 418 SCPTGSRPPDMRACSLGPCERTWRWYTG 445
>BC064425-1|AAH64425.1| 343|Homo sapiens high mobility group
AT-hook 1-like 4 protein.
Length = 343
Score = 29.1 bits (62), Expect = 8.3
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = +3
Query: 330 HGVSSKKRKLIRGKSPAAQHQSDECGRSPPLPGE 431
HGV KK K + K HQ ++ G + P P +
Sbjct: 20 HGVHKKKHKKHKKKHKKKHHQEEDAGPTQPSPAK 53
>BC050666-1|AAH50666.1| 343|Homo sapiens ZNHIT4 protein protein.
Length = 343
Score = 29.1 bits (62), Expect = 8.3
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = +3
Query: 330 HGVSSKKRKLIRGKSPAAQHQSDECGRSPPLPGE 431
HGV KK K + K HQ ++ G + P P +
Sbjct: 20 HGVHKKKHKKHKKKHKKKHHQEEDAGPTQPSPAK 53
>BC027478-1|AAH27478.1| 424|Homo sapiens ADAMTSL4 protein protein.
Length = 424
Score = 29.1 bits (62), Expect = 8.3
Identities = 13/28 (46%), Positives = 14/28 (50%)
Frame = -1
Query: 309 SCFASSRFPAL*HCELGPSESIWEHMTG 226
SC SR P + C LGP E W TG
Sbjct: 240 SCPTGSRPPDMRACSLGPCERTWRWYTG 267
>AL356356-13|CAI15500.2| 1074|Homo sapiens ADAMTS-like 4 protein.
Length = 1074
Score = 29.1 bits (62), Expect = 8.3
Identities = 13/28 (46%), Positives = 14/28 (50%)
Frame = -1
Query: 309 SCFASSRFPAL*HCELGPSESIWEHMTG 226
SC SR P + C LGP E W TG
Sbjct: 890 SCPTGSRPPDMRACSLGPCERTWRWYTG 917
>AF217974-1|AAG17217.1| 237|Homo sapiens unknown protein.
Length = 237
Score = 29.1 bits (62), Expect = 8.3
Identities = 13/28 (46%), Positives = 14/28 (50%)
Frame = -1
Query: 309 SCFASSRFPAL*HCELGPSESIWEHMTG 226
SC SR P + C LGP E W TG
Sbjct: 53 SCPTGSRPPDMRACSLGPCERTWRWYTG 80
>AB054538-1|BAB21111.1| 343|Homo sapiens PAPA-1 protein.
Length = 343
Score = 29.1 bits (62), Expect = 8.3
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = +3
Query: 330 HGVSSKKRKLIRGKSPAAQHQSDECGRSPPLPGE 431
HGV KK K + K HQ ++ G + P P +
Sbjct: 20 HGVHKKKHKKHKKKHKKKHHQEEDAGPTQPSPAK 53
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 65,869,931
Number of Sequences: 237096
Number of extensions: 1402402
Number of successful extensions: 8742
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 8645
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8733
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 4213781852
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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