Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= psV30411.Seq
(515 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P61254 Cluster: 60S ribosomal protein L26; n=96; Eukary... 151 7e-36
UniRef50_UPI0000D8B882 Cluster: similar to 60S ribosomal protein... 134 1e-30
UniRef50_A5KBD9 Cluster: 60S ribosomal protein L26, putative; n=... 105 5e-22
UniRef50_A2QXI7 Cluster: Contig An11c0300, complete genome; n=2;... 101 1e-20
UniRef50_Q5ZDH6 Cluster: Putative ribosomal protein L26; n=1; Or... 98 9e-20
UniRef50_P05743 Cluster: 60S ribosomal protein L26-A; n=92; Euka... 95 8e-19
UniRef50_A0BIZ3 Cluster: Chromosome undetermined scaffold_11, wh... 93 5e-18
UniRef50_Q00Y51 Cluster: Putative L24 ribosomal protein; n=1; Os... 92 6e-18
UniRef50_UPI0000499C5A Cluster: 60S ribosomal protein L26; n=2; ... 83 5e-15
UniRef50_Q7R3B5 Cluster: GLP_111_22147_22554; n=1; Giardia lambl... 81 2e-14
UniRef50_A7QPA2 Cluster: Chromosome chr1 scaffold_136, whole gen... 79 4e-14
UniRef50_P54038 Cluster: 50S ribosomal protein L24P; n=14; Archa... 77 2e-13
UniRef50_Q8TW19 Cluster: 50S ribosomal protein L24P; n=17; Archa... 75 7e-13
UniRef50_UPI0000DD790D Cluster: PREDICTED: similar to 60S riboso... 73 3e-12
UniRef50_Q0IUK5 Cluster: Os11g0151300 protein; n=1; Oryza sativa... 71 1e-11
UniRef50_P60663 Cluster: 50S ribosomal protein L24P; n=1; Nanoar... 65 8e-10
UniRef50_Q8SRE6 Cluster: 60S RIBOSOMAL PROTEIN L26; n=1; Encepha... 64 2e-09
UniRef50_A3H985 Cluster: Ribosomal protein L24; n=1; Caldivirga ... 63 3e-09
UniRef50_A1RWS4 Cluster: Ribosomal protein L24; n=1; Thermofilum... 62 6e-09
UniRef50_O05633 Cluster: 50S ribosomal protein L24P; n=1; Sulfol... 61 1e-08
UniRef50_A2DCS2 Cluster: Ribosomal protein L24, putative; n=2; T... 60 4e-08
UniRef50_Q98RW9 Cluster: 60S ribosomal protein L26; n=1; Guillar... 58 1e-07
UniRef50_Q8PV39 Cluster: 50S ribosomal protein L24P; n=9; Euryar... 52 1e-05
UniRef50_A0RVY4 Cluster: Ribosomal protein L24; n=1; Cenarchaeum... 51 2e-05
UniRef50_A4YCX7 Cluster: KOW domain protein; n=1; Metallosphaera... 48 2e-04
UniRef50_A7DSY3 Cluster: KOW domain protein; n=1; Candidatus Nit... 47 2e-04
UniRef50_Q97BW5 Cluster: 50S ribosomal protein L24P; n=2; Thermo... 46 7e-04
UniRef50_Q6L1B6 Cluster: Large subunit ribosomal protein L24P; n... 45 9e-04
UniRef50_P10972 Cluster: 50S ribosomal protein L24P; n=6; Euryar... 45 0.001
UniRef50_Q30Z53 Cluster: 50S ribosomal protein L24; n=9; Bacteri... 40 0.025
UniRef50_UPI00005A08CE Cluster: PREDICTED: similar to 60S riboso... 40 0.034
UniRef50_Q56435 Cluster: 50S ribosomal protein L24; n=18; Bacter... 39 0.078
UniRef50_Q0IQ32 Cluster: Os12g0150000 protein; n=1; Oryza sativa... 38 0.14
UniRef50_Q2JIL6 Cluster: 50S ribosomal protein L24; n=25; Bacter... 37 0.24
UniRef50_Q4S8H7 Cluster: Chromosome 2 SCAF14705, whole genome sh... 36 0.41
UniRef50_Q9XD25 Cluster: 50S ribosomal protein L24; n=11; Bacter... 36 0.55
UniRef50_Q64E17 Cluster: Ribosomal protein L21E; n=3; environmen... 35 1.3
UniRef50_Q9ZCR6 Cluster: 50S ribosomal protein L24; n=60; Bacter... 35 1.3
UniRef50_Q673R7 Cluster: Ribosomal protein L24; n=2; environment... 34 1.7
UniRef50_UPI0000DC0080 Cluster: UPI0000DC0080 related cluster; n... 34 2.2
UniRef50_A2U3B6 Cluster: 50S ribosomal protein L24; n=3; Bacteri... 34 2.2
UniRef50_Q5QXW9 Cluster: 50S ribosomal protein L24; n=9; Bacteri... 34 2.2
UniRef50_A1IBE3 Cluster: Pleiotropic regulatory protein; n=2; De... 33 2.9
UniRef50_Q5C6X2 Cluster: Putative uncharacterized protein; n=1; ... 33 5.1
UniRef50_UPI0000DB7931 Cluster: PREDICTED: similar to shuttle cr... 32 6.8
UniRef50_Q67JV4 Cluster: 50S ribosomal protein L24; n=5; Bacteri... 32 6.8
UniRef50_Q9L0C9 Cluster: 50S ribosomal protein L24; n=61; Bacter... 32 6.8
UniRef50_O67569 Cluster: 50S ribosomal protein L24; n=10; Bacter... 32 6.8
UniRef50_O46905 Cluster: Chloroplast 50S ribosomal protein L24; ... 32 6.8
UniRef50_Q8YLR0 Cluster: Alr5236 protein; n=1; Nostoc sp. PCC 71... 32 8.9
UniRef50_A4CYH5 Cluster: Putative uncharacterized protein; n=1; ... 32 8.9
UniRef50_Q1KVT3 Cluster: DNA-directed RNA polymerase; n=1; Scene... 32 8.9
UniRef50_Q7RN67 Cluster: DHHC zinc finger domain, putative; n=5;... 32 8.9
UniRef50_Q4YND5 Cluster: Putative uncharacterized protein; n=1; ... 32 8.9
>UniRef50_P61254 Cluster: 60S ribosomal protein L26; n=96;
Eukaryota|Rep: 60S ribosomal protein L26 - Homo sapiens
(Human)
Length = 145
Score = 151 bits (367), Expect = 7e-36
Identities = 69/89 (77%), Positives = 80/89 (89%)
Frame = +3
Query: 6 MKFNKQVTSSRRKNRKRHFSAPSHIXRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRG 185
MKFN VTS R KNRKRHF+APSHI R +MSSPLSKELRQK+NV+SMPIRKDDEVQVVRG
Sbjct: 1 MKFNPFVTSDRSKNRKRHFNAPSHIRRKIMSSPLSKELRQKYNVRSMPIRKDDEVQVVRG 60
Query: 186 HYKGQQVGKVMQVYRKKFVVYIEGFKEKR 272
HYKGQQ+GKV+QVYRKK+V+YIE + ++
Sbjct: 61 HYKGQQIGKVVQVYRKKYVIYIERVQREK 89
Score = 76.2 bits (179), Expect = 4e-13
Identities = 35/53 (66%), Positives = 44/53 (83%)
Frame = +2
Query: 257 IQREKANGATAYVGIHPSKCVIVKLKMNKDRKAILDRRAKGRLAALGKDKGKY 415
+QREKANG T +VGIHPSK VI +LK++KDRK IL+R+AK R +GK+KGKY
Sbjct: 85 VQREKANGTTVHVGIHPSKVVITRLKLDKDRKKILERKAKSR--QVGKEKGKY 135
>UniRef50_UPI0000D8B882 Cluster: similar to 60S ribosomal protein
L26 (Silica-induced gene 20 protein) (SIG-20)
(LOC668913), mRNA; n=2; Eutheria|Rep: similar to 60S
ribosomal protein L26 (Silica-induced gene 20 protein)
(SIG-20) (LOC668913), mRNA - Mus musculus
Length = 139
Score = 134 bits (324), Expect = 1e-30
Identities = 61/89 (68%), Positives = 75/89 (84%)
Frame = +3
Query: 6 MKFNKQVTSSRRKNRKRHFSAPSHIXRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRG 185
MKFN VTS R K HF+APSHI R +MSSPLSKELRQK+NV+SMP +KDDEVQVVRG
Sbjct: 1 MKFNPFVTSDRSMKHKWHFNAPSHILRKIMSSPLSKELRQKYNVQSMPTQKDDEVQVVRG 60
Query: 186 HYKGQQVGKVMQVYRKKFVVYIEGFKEKR 272
HY+GQQ+GKV+QVYRKK+V+YI+ + ++
Sbjct: 61 HYEGQQIGKVVQVYRKKYVIYIKQVEREK 89
Score = 57.6 bits (133), Expect = 2e-07
Identities = 30/53 (56%), Positives = 39/53 (73%)
Frame = +2
Query: 257 IQREKANGATAYVGIHPSKCVIVKLKMNKDRKAILDRRAKGRLAALGKDKGKY 415
++REKANG T VGIHPSK VI +LK+ +DRK IL+R+ +GK+KGKY
Sbjct: 85 VEREKANGTTVRVGIHPSKVVITRLKL-EDRKKILERK-------VGKEKGKY 129
>UniRef50_A5KBD9 Cluster: 60S ribosomal protein L26, putative; n=9;
Eukaryota|Rep: 60S ribosomal protein L26, putative -
Plasmodium vivax
Length = 156
Score = 105 bits (253), Expect = 5e-22
Identities = 46/84 (54%), Positives = 68/84 (80%)
Frame = +3
Query: 3 RMKFNKQVTSSRRKNRKRHFSAPSHIXRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVR 182
+MKFNKQ++S+RRK RK HF+AP+ + R +MSS LSKELR K+ +++P+RKDDEV + R
Sbjct: 29 KMKFNKQISSARRKMRKAHFTAPAGLRRKIMSSKLSKELRLKYKTRALPVRKDDEVLICR 88
Query: 183 GHYKGQQVGKVMQVYRKKFVVYIE 254
GH G++ GKV+++ RK+F +Y+E
Sbjct: 89 GHNHGRE-GKVVKINRKRFKIYVE 111
Score = 55.6 bits (128), Expect = 6e-07
Identities = 22/39 (56%), Positives = 32/39 (82%)
Frame = +2
Query: 257 IQREKANGATAYVGIHPSKCVIVKLKMNKDRKAILDRRA 373
+ REKANG + ++GIHPS ++ KLK++K+RK ILDR+A
Sbjct: 113 VTREKANGESTFIGIHPSNVILTKLKIDKNRKKILDRKA 151
>UniRef50_A2QXI7 Cluster: Contig An11c0300, complete genome; n=2;
Trichocomaceae|Rep: Contig An11c0300, complete genome -
Aspergillus niger
Length = 134
Score = 101 bits (242), Expect = 1e-20
Identities = 48/80 (60%), Positives = 62/80 (77%)
Frame = +3
Query: 15 NKQVTSSRRKNRKRHFSAPSHIXRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRGHYK 194
N + SSRRK+R HF+APS RV++S+PLS ELR K+NV+SMPIRKDDEV VVRG K
Sbjct: 5 NSSLASSRRKSRAAHFNAPSSERRVILSAPLSSELRAKYNVRSMPIRKDDEVMVVRGSNK 64
Query: 195 GQQVGKVMQVYRKKFVVYIE 254
G++ GKV VYR K+ +++E
Sbjct: 65 GRE-GKVTSVYRLKWAIHVE 83
Score = 51.2 bits (117), Expect = 1e-05
Identities = 24/48 (50%), Positives = 33/48 (68%)
Frame = +2
Query: 257 IQREKANGATAYVGIHPSKCVIVKLKMNKDRKAILDRRAKGRLAALGK 400
I R+K+NG + + +HPS VI KL ++KDR+AIL+R KGR A K
Sbjct: 85 ISRDKSNGQSVPIPLHPSNVVIKKLHLDKDREAILERVGKGREAVKAK 132
>UniRef50_Q5ZDH6 Cluster: Putative ribosomal protein L26; n=1; Oryza
sativa (japonica cultivar-group)|Rep: Putative ribosomal
protein L26 - Oryza sativa subsp. japonica (Rice)
Length = 129
Score = 98.3 bits (234), Expect = 9e-20
Identities = 47/64 (73%), Positives = 54/64 (84%)
Frame = +3
Query: 6 MKFNKQVTSSRRKNRKRHFSAPSHIXRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRG 185
MK N +VTSSRRK RK HF+APS + RVLMS+ LS ELR K+NV+S+PIRKDDEVQVVRG
Sbjct: 1 MKRNPRVTSSRRKCRKAHFTAPSSVRRVLMSAALSSELRHKYNVRSIPIRKDDEVQVVRG 60
Query: 186 HYKG 197
YKG
Sbjct: 61 SYKG 64
>UniRef50_P05743 Cluster: 60S ribosomal protein L26-A; n=92;
Eukaryota|Rep: 60S ribosomal protein L26-A -
Saccharomyces cerevisiae (Baker's yeast)
Length = 127
Score = 95.1 bits (226), Expect = 8e-19
Identities = 49/88 (55%), Positives = 65/88 (73%), Gaps = 1/88 (1%)
Frame = +3
Query: 9 KFNKQVTSSRRKNRKRHFSAPSHIXRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRGH 188
K + V+S RRK RK +F+APS RVL+S+PLSKELR ++ +K++PIR+DDEV VVRG
Sbjct: 3 KQSLDVSSDRRKARKAYFTAPSSQRRVLLSAPLSKELRAQYGIKALPIRRDDEVLVVRGS 62
Query: 189 YKGQQVGKVMQVYRKKFVVYIEGF-KEK 269
KGQ+ GK+ VYR KF V ++ KEK
Sbjct: 63 KKGQE-GKISSVYRLKFAVQVDKVTKEK 89
Score = 49.2 bits (112), Expect = 6e-05
Identities = 21/43 (48%), Positives = 32/43 (74%)
Frame = +2
Query: 257 IQREKANGATAYVGIHPSKCVIVKLKMNKDRKAILDRRAKGRL 385
+ +EK NGA+ + +HPSK VI KL ++KDRKA++ R+ G+L
Sbjct: 85 VTKEKVNGASVPINLHPSKLVITKLHLDKDRKALIQRKG-GKL 126
>UniRef50_A0BIZ3 Cluster: Chromosome undetermined scaffold_11, whole
genome shotgun sequence; n=4; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_11,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 144
Score = 92.7 bits (220), Expect = 5e-18
Identities = 44/83 (53%), Positives = 63/83 (75%)
Frame = +3
Query: 6 MKFNKQVTSSRRKNRKRHFSAPSHIXRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRG 185
MK + +V+S RRK R+ APS++ LMS+ LSK+LR+K+NV+++P+RKDDEV VVRG
Sbjct: 1 MKTHVEVSSQRRKGRRAQLGAPSNLRYKLMSAHLSKDLRKKYNVRALPVRKDDEVTVVRG 60
Query: 186 HYKGQQVGKVMQVYRKKFVVYIE 254
+KG + GKV VYRK++ + IE
Sbjct: 61 THKGTK-GKVSSVYRKRWTIQIE 82
Score = 43.6 bits (98), Expect = 0.003
Identities = 19/48 (39%), Positives = 30/48 (62%)
Frame = +2
Query: 257 IQREKANGATAYVGIHPSKCVIVKLKMNKDRKAILDRRAKGRLAALGK 400
+ R KANG + I S+C+I K +N+DRK +L R+A +++ GK
Sbjct: 84 LTRTKANGMPYQIPIRASQCIITKPYLNEDRKQLLARKASAKVSTKGK 131
>UniRef50_Q00Y51 Cluster: Putative L24 ribosomal protein; n=1;
Ostreococcus tauri|Rep: Putative L24 ribosomal protein -
Ostreococcus tauri
Length = 154
Score = 92.3 bits (219), Expect = 6e-18
Identities = 45/82 (54%), Positives = 62/82 (75%)
Frame = +3
Query: 6 MKFNKQVTSSRRKNRKRHFSAPSHIXRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRG 185
MK++ VTSSRRK RK HF+APS R LMS+ LS EL+ + ++PIR +DEV+V RG
Sbjct: 20 MKYSTAVTSSRRKTRKAHFTAPSSERRKLMSAALSAELKAQHGANAVPIRVNDEVRVTRG 79
Query: 186 HYKGQQVGKVMQVYRKKFVVYI 251
+K ++ GKV+QVYRKK+V++I
Sbjct: 80 SFKNRE-GKVVQVYRKKWVIHI 100
>UniRef50_UPI0000499C5A Cluster: 60S ribosomal protein L26; n=2;
Entamoeba histolytica HM-1:IMSS|Rep: 60S ribosomal
protein L26 - Entamoeba histolytica HM-1:IMSS
Length = 213
Score = 82.6 bits (195), Expect = 5e-15
Identities = 41/83 (49%), Positives = 60/83 (72%)
Frame = +3
Query: 6 MKFNKQVTSSRRKNRKRHFSAPSHIXRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRG 185
MKFN +V+S+ K RK ++AP+ +LMS+ LSKELR+K+NV ++PI KDDEV++++G
Sbjct: 1 MKFNCKVSSNPSKARKALYTAPASQRAILMSARLSKELREKYNVIAIPIHKDDEVKIIKG 60
Query: 186 HYKGQQVGKVMQVYRKKFVVYIE 254
H K GKV V R K+V+ I+
Sbjct: 61 HQK--VAGKVTAVRRSKYVINID 81
Score = 44.0 bits (99), Expect = 0.002
Identities = 20/42 (47%), Positives = 28/42 (66%)
Frame = +2
Query: 257 IQREKANGATAYVGIHPSKCVIVKLKMNKDRKAILDRRAKGR 382
+ + KANG T V I PS +I KL +NKDR+A L ++A+ R
Sbjct: 83 LTKTKANGQTVPVAIRPSNVIITKLFLNKDREAYLAKKAESR 124
>UniRef50_Q7R3B5 Cluster: GLP_111_22147_22554; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_111_22147_22554 - Giardia lamblia
ATCC 50803
Length = 135
Score = 80.6 bits (190), Expect = 2e-14
Identities = 40/88 (45%), Positives = 59/88 (67%)
Frame = +3
Query: 6 MKFNKQVTSSRRKNRKRHFSAPSHIXRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRG 185
MK N VT+SRRK RK +F+A + +MSS LSKELR + +K+MPIR+ D V++ G
Sbjct: 1 MKLNSAVTASRRKCRKAYFTANAETRAKMMSSRLSKELRAEHKIKTMPIRRGDIVEIFTG 60
Query: 186 HYKGQQVGKVMQVYRKKFVVYIEGFKEK 269
+KG GKV++V R+ + + +EG +K
Sbjct: 61 GHKG--TGKVVEVRRRDYKICVEGINQK 86
Score = 31.9 bits (69), Expect = 8.9
Identities = 17/37 (45%), Positives = 22/37 (59%), Gaps = 3/37 (8%)
Frame = +2
Query: 299 IHPSKCVIVKLKMNKDRKAILDRRAK---GRLAALGK 400
IHPS C+I +L MN R + RR + RLA +GK
Sbjct: 99 IHPSNCIIKELYMNGSRYRAIKRRQERNAERLARIGK 135
>UniRef50_A7QPA2 Cluster: Chromosome chr1 scaffold_136, whole genome
shotgun sequence; n=2; Vitis vinifera|Rep: Chromosome
chr1 scaffold_136, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 119
Score = 79.4 bits (187), Expect = 4e-14
Identities = 40/72 (55%), Positives = 55/72 (76%), Gaps = 1/72 (1%)
Frame = +3
Query: 78 IXRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVYIEG 257
+ +LMS+PLS LR K+NV+SMPIRKDDEVQVVRG +KG++ GKV+QVY +K V++++
Sbjct: 43 VIELLMSAPLSTNLRSKYNVRSMPIRKDDEVQVVRGTFKGRE-GKVVQVYCQKRVIHVKR 101
Query: 258 FK-EKRPMVQQH 290
EK P+ H
Sbjct: 102 ISHEKIPIGFPH 113
>UniRef50_P54038 Cluster: 50S ribosomal protein L24P; n=14;
Archaea|Rep: 50S ribosomal protein L24P - Methanococcus
jannaschii
Length = 120
Score = 77.0 bits (181), Expect = 2e-13
Identities = 38/89 (42%), Positives = 60/89 (67%)
Frame = +3
Query: 6 MKFNKQVTSSRRKNRKRHFSAPSHIXRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRG 185
M F K + RK RK F+AP H+ R +MS+ LSKEL++K ++P+RK D V+++RG
Sbjct: 1 MAFTK--SKQPRKQRKALFNAPLHLRRKVMSAMLSKELKEKLGKNAIPVRKGDVVRIMRG 58
Query: 186 HYKGQQVGKVMQVYRKKFVVYIEGFKEKR 272
+KG + G+V++V K++ +Y+EG KR
Sbjct: 59 DFKGLE-GEVIKVDLKRYRIYVEGANNKR 86
>UniRef50_Q8TW19 Cluster: 50S ribosomal protein L24P; n=17;
Archaea|Rep: 50S ribosomal protein L24P - Methanopyrus
kandleri
Length = 149
Score = 75.4 bits (177), Expect = 7e-13
Identities = 35/77 (45%), Positives = 55/77 (71%)
Frame = +3
Query: 27 TSSRRKNRKRHFSAPSHIXRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQV 206
+S RK RK F+AP H + LMS+ L ELR+KFN +S+P+R+ D V+++RG +KG +
Sbjct: 6 SSQPRKQRKAFFNAPLHKRQKLMSATLHPELRKKFNRRSLPVRRGDMVRIMRGDFKGHE- 64
Query: 207 GKVMQVYRKKFVVYIEG 257
G+V++V K+ +Y+EG
Sbjct: 65 GEVVEVDLKRLRIYVEG 81
>UniRef50_UPI0000DD790D Cluster: PREDICTED: similar to 60S ribosomal
protein L26 (Silica-induced gene 20 protein) (SIG-20);
n=2; Homo/Pan/Gorilla group|Rep: PREDICTED: similar to
60S ribosomal protein L26 (Silica-induced gene 20
protein) (SIG-20) - Homo sapiens
Length = 127
Score = 73.3 bits (172), Expect = 3e-12
Identities = 34/54 (62%), Positives = 44/54 (81%), Gaps = 2/54 (3%)
Frame = +3
Query: 117 LRQKFNVKSMPIRKDDEVQVVR--GHYKGQQVGKVMQVYRKKFVVYIEGFKEKR 272
L NV+SMP RKD+EVQVVR GHYKGQQ+G V+QVYRKK+V+YIE ++++
Sbjct: 18 LNAHINVQSMPNRKDNEVQVVRVRGHYKGQQIGTVVQVYRKKYVIYIEWVQQEK 71
Score = 69.3 bits (162), Expect = 5e-11
Identities = 32/53 (60%), Positives = 42/53 (79%)
Frame = +2
Query: 257 IQREKANGATAYVGIHPSKCVIVKLKMNKDRKAILDRRAKGRLAALGKDKGKY 415
+Q+EKANG T +VGIHPSK VI +LK++KDRK I +++AK A GK+KGKY
Sbjct: 67 VQQEKANGTTVHVGIHPSKAVITRLKLDKDRKKIPEQKAKSHQA--GKEKGKY 117
>UniRef50_Q0IUK5 Cluster: Os11g0151300 protein; n=1; Oryza sativa
(japonica cultivar-group)|Rep: Os11g0151300 protein -
Oryza sativa subsp. japonica (Rice)
Length = 163
Score = 71.3 bits (167), Expect = 1e-11
Identities = 35/53 (66%), Positives = 41/53 (77%)
Frame = +2
Query: 257 IQREKANGATAYVGIHPSKCVIVKLKMNKDRKAILDRRAKGRLAALGKDKGKY 415
I REK NG+T VGIHPSK V+ KLK++KDRKAILDR+A GR A K KGK+
Sbjct: 94 ITREKVNGSTVNVGIHPSKVVVTKLKLDKDRKAILDRKASGR--AADKAKGKF 144
Score = 57.6 bits (133), Expect = 2e-07
Identities = 24/36 (66%), Positives = 34/36 (94%)
Frame = +3
Query: 147 PIRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVYIE 254
P+RKDDEVQVVRG YKG++ GKV+QVYR+++V+++E
Sbjct: 58 PVRKDDEVQVVRGSYKGRE-GKVVQVYRRRWVIHVE 92
>UniRef50_P60663 Cluster: 50S ribosomal protein L24P; n=1;
Nanoarchaeum equitans|Rep: 50S ribosomal protein L24P -
Nanoarchaeum equitans
Length = 140
Score = 65.3 bits (152), Expect = 8e-10
Identities = 31/71 (43%), Positives = 50/71 (70%)
Frame = +3
Query: 39 RKNRKRHFSAPSHIXRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVM 218
RK RK +AP H R +M SPLSKELR+K ++++PI+ D V+V RG+++G++ G+V+
Sbjct: 23 RKQRKYIINAPLHRRRKMMRSPLSKELREKLGIRNVPIKVGDVVRVERGNFRGKE-GQVI 81
Query: 219 QVYRKKFVVYI 251
+ K + VY+
Sbjct: 82 DIDPKYYRVYL 92
>UniRef50_Q8SRE6 Cluster: 60S RIBOSOMAL PROTEIN L26; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L26
- Encephalitozoon cuniculi
Length = 143
Score = 64.1 bits (149), Expect = 2e-09
Identities = 32/80 (40%), Positives = 50/80 (62%)
Frame = +3
Query: 18 KQVTSSRRKNRKRHFSAPSHIXRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRGHYKG 197
KQ TSSRRK RK HF+ R+ S+ LS+ELR+++ ++ P+R D V V G + G
Sbjct: 6 KQKTSSRRKQRKAHFACNDGEKRIRSSARLSRELRKEYGFRTFPLRTGDTVVVKGGKFDG 65
Query: 198 QQVGKVMQVYRKKFVVYIEG 257
++ G + ++ + + VYIEG
Sbjct: 66 KE-GVISKINYRDYKVYIEG 84
>UniRef50_A3H985 Cluster: Ribosomal protein L24; n=1; Caldivirga
maquilingensis IC-167|Rep: Ribosomal protein L24 -
Caldivirga maquilingensis IC-167
Length = 143
Score = 63.3 bits (147), Expect = 3e-09
Identities = 30/83 (36%), Positives = 52/83 (62%)
Frame = +3
Query: 27 TSSRRKNRKRHFSAPSHIXRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQV 206
+S RK K AP H R L+++PLSK+L+++ ++ +P+R D V ++RG +KG +
Sbjct: 7 SSQPRKQHKALTKAPWHARRRLLTAPLSKDLQRQLGIRRIPVRVGDTVLILRGDFKGTR- 65
Query: 207 GKVMQVYRKKFVVYIEGFKEKRP 275
GKV +V K+ +Y++ K+P
Sbjct: 66 GKVTRVDYKRVRIYVDSASFKKP 88
Score = 36.7 bits (81), Expect = 0.31
Identities = 20/45 (44%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Frame = +2
Query: 266 EKANGATAYVGIHPSKCVIVKL-KMNKDRKAILDRRAKGRLAALG 397
+K +G Y IHPSK VIV+L + +K R A +D+ K R A G
Sbjct: 86 KKPSGEAVYYPIHPSKVVIVELDQSDKARVAAIDKTRKAREAKAG 130
>UniRef50_A1RWS4 Cluster: Ribosomal protein L24; n=1; Thermofilum
pendens Hrk 5|Rep: Ribosomal protein L24 - Thermofilum
pendens (strain Hrk 5)
Length = 131
Score = 62.5 bits (145), Expect = 6e-09
Identities = 35/81 (43%), Positives = 49/81 (60%), Gaps = 1/81 (1%)
Frame = +3
Query: 18 KQVTSSRRKNRKRH-FSAPSHIXRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRGHYK 194
K +S K RKR + AP HI + +PLS EL+QK +K + +RK D V +VRG +K
Sbjct: 3 KGTSSKPGKVRKREVYDAPLHIRSKKIVAPLSAELQQKLGIKRIRVRKGDRVLIVRGSFK 62
Query: 195 GQQVGKVMQVYRKKFVVYIEG 257
G + GKV V KK +++EG
Sbjct: 63 GHE-GKVTSVDVKKGRIHVEG 82
>UniRef50_O05633 Cluster: 50S ribosomal protein L24P; n=1;
Sulfolobus acidocaldarius|Rep: 50S ribosomal protein
L24P - Sulfolobus acidocaldarius
Length = 134
Score = 61.3 bits (142), Expect = 1e-08
Identities = 30/83 (36%), Positives = 55/83 (66%)
Frame = +3
Query: 24 VTSSRRKNRKRHFSAPSHIXRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQ 203
++S K RK ++ P+H+ L+++ LS++L +++ +K + IRK D V+++RG G +
Sbjct: 2 ISSKPSKQRKLVYNLPNHLRYKLLTARLSEDLEKQYGIKRISIRKGDSVKLMRGSQVGYE 61
Query: 204 VGKVMQVYRKKFVVYIEGFKEKR 272
GKV++V RK+ V IEG +K+
Sbjct: 62 -GKVVEVDRKRGRVAIEGLTKKK 83
>UniRef50_A2DCS2 Cluster: Ribosomal protein L24, putative; n=2;
Trichomonas vaginalis G3|Rep: Ribosomal protein L24,
putative - Trichomonas vaginalis G3
Length = 138
Score = 59.7 bits (138), Expect = 4e-08
Identities = 28/51 (54%), Positives = 36/51 (70%), Gaps = 3/51 (5%)
Frame = +2
Query: 263 REKANGATAYVGIHPSKCVIVKLKMNKDRKAILDRRAKGR---LAALGKDK 406
REK NG T +V +HPS C+I KLKM+K RK +++RR GR LA LG +K
Sbjct: 87 REKLNGQTVHVSVHPSNCLITKLKMDKQRKELIERRRAGREKILAKLGHNK 137
Score = 53.6 bits (123), Expect = 3e-06
Identities = 28/89 (31%), Positives = 50/89 (56%)
Frame = +3
Query: 6 MKFNKQVTSSRRKNRKRHFSAPSHIXRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRG 185
+K N ++S +K RK F+A +S+ L+KE + VK +PIR+DDEV + G
Sbjct: 2 VKTNPFLSSQAKKTRKAFFNATKDDKHRQLSAKLNKEQAETHGVKQLPIRRDDEVSINSG 61
Query: 186 HYKGQQVGKVMQVYRKKFVVYIEGFKEKR 272
+ G++ GKV+ V + + ++ F ++
Sbjct: 62 KFAGRE-GKVIAVKLSENRIVVDSFTREK 89
>UniRef50_Q98RW9 Cluster: 60S ribosomal protein L26; n=1; Guillardia
theta|Rep: 60S ribosomal protein L26 - Guillardia theta
(Cryptomonas phi)
Length = 108
Score = 58.0 bits (134), Expect = 1e-07
Identities = 31/89 (34%), Positives = 56/89 (62%), Gaps = 1/89 (1%)
Frame = +3
Query: 6 MKFNKQVTSSRRKNRKRHFSAPSHIXRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRG 185
MK+ VT SRRKNRKR F ++ + LSKE+++ K++ ++K+ E++V RG
Sbjct: 1 MKYKHHVTCSRRKNRKRCFLNLKRKNSNIIKTNLSKEMQKYHKKKTLILKKNYEIKVKRG 60
Query: 186 HYKGQQVGKVMQVYRKKFVVYIEG-FKEK 269
+KG + GKV+Q+ ++ ++++ F+ K
Sbjct: 61 DFKG-KTGKVIQIKPEQQKIFVDNIFRNK 88
>UniRef50_Q8PV39 Cluster: 50S ribosomal protein L24P; n=9;
Euryarchaeota|Rep: 50S ribosomal protein L24P -
Methanosarcina mazei (Methanosarcina frisia)
Length = 122
Score = 51.6 bits (118), Expect = 1e-05
Identities = 25/80 (31%), Positives = 45/80 (56%)
Frame = +3
Query: 18 KQVTSSRRKNRKRHFSAPSHIXRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRGHYKG 197
+ V+ RK RK ++AP HI + M + LS+ L +++ +S + D V+++RG +KG
Sbjct: 6 EMVSKQPRKQRKARYTAPLHIRQKFMGARLSEALAKQYGTRSAAVITGDTVKIMRGDFKG 65
Query: 198 QQVGKVMQVYRKKFVVYIEG 257
+ GKV V + ++G
Sbjct: 66 TE-GKVQSVSLMDGTIAVDG 84
>UniRef50_A0RVY4 Cluster: Ribosomal protein L24; n=1; Cenarchaeum
symbiosum|Rep: Ribosomal protein L24 - Cenarchaeum
symbiosum
Length = 167
Score = 50.8 bits (116), Expect = 2e-05
Identities = 30/81 (37%), Positives = 48/81 (59%)
Frame = +3
Query: 30 SSRRKNRKRHFSAPSHIXRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVG 209
+++ +NR+ + A + + + SPLSKELR K+ +S+ + + D V VVRG YK G
Sbjct: 3 ATKMRNRQI-YQASTRTRSMQVGSPLSKELRAKYGKRSVRVVEGDTVSVVRGEYKDID-G 60
Query: 210 KVMQVYRKKFVVYIEGFKEKR 272
KV V + V IEG K+++
Sbjct: 61 KVSHVDTESGSVAIEGIKKEK 81
>UniRef50_A4YCX7 Cluster: KOW domain protein; n=1; Metallosphaera
sedula DSM 5348|Rep: KOW domain protein - Metallosphaera
sedula DSM 5348
Length = 111
Score = 47.6 bits (108), Expect = 2e-04
Identities = 25/58 (43%), Positives = 38/58 (65%)
Frame = +3
Query: 99 SPLSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVYIEGFKEKR 272
+PLS EL +++ +K + IRKDD V+V+RG G + GKV QV+ + + IEG K+
Sbjct: 8 APLSDELAKEYGMKRIGIRKDDTVRVMRGDNYGFE-GKVTQVFPESGRIAIEGLTRKK 64
>UniRef50_A7DSY3 Cluster: KOW domain protein; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: KOW domain protein -
Candidatus Nitrosopumilus maritimus SCM1
Length = 168
Score = 47.2 bits (107), Expect = 2e-04
Identities = 23/60 (38%), Positives = 39/60 (65%)
Frame = +3
Query: 93 MSSPLSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVYIEGFKEKR 272
+ S LSK+L++K+ +S+ + + D V ++RG +KG GKV +V K V IEG K+++
Sbjct: 23 LGSALSKDLQKKYGKRSVRVNEGDSVTILRGEFKGVD-GKVAEVSTAKSSVAIEGVKKEK 81
>UniRef50_Q97BW5 Cluster: 50S ribosomal protein L24P; n=2;
Thermoplasma|Rep: 50S ribosomal protein L24P -
Thermoplasma volcanium
Length = 145
Score = 45.6 bits (103), Expect = 7e-04
Identities = 24/51 (47%), Positives = 34/51 (66%)
Frame = +3
Query: 105 LSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVYIEG 257
LSK+LR+K+ ++S PI K D V+VV G KG+ GKV +V +V +EG
Sbjct: 9 LSKDLRKKYGIRSFPIVKGDVVKVVSGARKGEG-GKVAEVDHHSGLVIVEG 58
>UniRef50_Q6L1B6 Cluster: Large subunit ribosomal protein L24P; n=2;
Thermoplasmatales|Rep: Large subunit ribosomal protein
L24P - Picrophilus torridus
Length = 154
Score = 45.2 bits (102), Expect = 9e-04
Identities = 22/51 (43%), Positives = 33/51 (64%)
Frame = +3
Query: 105 LSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVYIEG 257
LSK+LR+K+ ++ P+ K D V+++ G KG+ GKV+ V K V IEG
Sbjct: 10 LSKDLRKKYGIRRFPVAKGDIVKIISGSRKGEG-GKVVDVDHKTMKVSIEG 59
>UniRef50_P10972 Cluster: 50S ribosomal protein L24P; n=6;
Euryarchaeota|Rep: 50S ribosomal protein L24P -
Haloarcula marismortui (Halobacterium marismortui)
Length = 120
Score = 44.8 bits (101), Expect = 0.001
Identities = 22/71 (30%), Positives = 42/71 (59%)
Frame = +3
Query: 42 KNRKRHFSAPSHIXRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMQ 221
K RK AP H + + LS +LR+++ +++ + D V+V+RG + G++ G+V+
Sbjct: 7 KQRKSQRRAPLHERHKQVRATLSADLREEYGQRNVRVNAGDTVEVLRGDFAGEE-GEVIN 65
Query: 222 VYRKKFVVYIE 254
V K V+++E
Sbjct: 66 VDLDKAVIHVE 76
>UniRef50_Q30Z53 Cluster: 50S ribosomal protein L24; n=9;
Bacteria|Rep: 50S ribosomal protein L24 - Desulfovibrio
desulfuricans (strain G20)
Length = 107
Score = 40.3 bits (90), Expect = 0.025
Identities = 24/55 (43%), Positives = 35/55 (63%)
Frame = +3
Query: 135 VKSMPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVYIEGFKEKRPMVQQHMSA 299
+K IRKDD+V V+ G KG ++GKV++V RKK V + EK + ++HM A
Sbjct: 1 MKQFRIRKDDKVMVISGKDKG-KIGKVLKVLRKKDRVLV----EKVNVAKRHMRA 50
>UniRef50_UPI00005A08CE Cluster: PREDICTED: similar to 60S ribosomal
protein L26-like 1; n=1; Canis lupus familiaris|Rep:
PREDICTED: similar to 60S ribosomal protein L26-like 1 -
Canis familiaris
Length = 165
Score = 39.9 bits (89), Expect = 0.034
Identities = 18/33 (54%), Positives = 22/33 (66%)
Frame = +3
Query: 6 MKFNKQVTSSRRKNRKRHFSAPSHIXRVLMSSP 104
M FN +T NRKRH +APSH+ R +MSSP
Sbjct: 97 MNFNPFLTWGCSTNRKRHVNAPSHVRRNIMSSP 129
>UniRef50_Q56435 Cluster: 50S ribosomal protein L24; n=18;
Bacteria|Rep: 50S ribosomal protein L24 - Thermus
thermophilus
Length = 110
Score = 38.7 bits (86), Expect = 0.078
Identities = 19/38 (50%), Positives = 25/38 (65%)
Frame = +3
Query: 144 MPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVYIEG 257
M ++K D V V G YKG+ VGKV +V KK+ V +EG
Sbjct: 5 MHVKKGDTVLVASGKYKGR-VGKVKEVLPKKYAVIVEG 41
>UniRef50_Q0IQ32 Cluster: Os12g0150000 protein; n=1; Oryza sativa
(japonica cultivar-group)|Rep: Os12g0150000 protein -
Oryza sativa subsp. japonica (Rice)
Length = 283
Score = 37.9 bits (84), Expect = 0.14
Identities = 24/85 (28%), Positives = 41/85 (48%)
Frame = -1
Query: 260 ESLNVYNKLFTIHLHHFANLLAFVVSTYNLNFIVFANRHGFYIEFLS*FLRQGRGHQHSX 81
++L+V + + LHH L A V ++L+ +V A+ G + ++ +G GH+ +
Sbjct: 113 DALDVDHPPAAVDLHHLP-LAALVAPPHHLHLVVLADGDGADVVLVAELGGEGGGHEDAA 171
Query: 80 YM*RSTEMPLPVFPS*GSHLLVELH 6
R E+ LP P H V LH
Sbjct: 172 DGGRRREVRLPALPPGARHAWVALH 196
>UniRef50_Q2JIL6 Cluster: 50S ribosomal protein L24; n=25;
Bacteria|Rep: 50S ribosomal protein L24 - Synechococcus
sp. (strain JA-2-3B'a(2-13)) (Cyanobacteria
bacteriumYellowstone B-Prime)
Length = 132
Score = 37.1 bits (82), Expect = 0.24
Identities = 23/63 (36%), Positives = 39/63 (61%)
Frame = +3
Query: 69 PSHIXRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVY 248
PS I R L+ P ++ R K M I++ D VQV+ G KG ++G+V++V+ ++ +V
Sbjct: 7 PSQIRR-LVRRPGIRKHRNSLRYK-MRIKQGDTVQVISGDDKG-KIGEVLRVFPERNMVL 63
Query: 249 IEG 257
+EG
Sbjct: 64 VEG 66
>UniRef50_Q4S8H7 Cluster: Chromosome 2 SCAF14705, whole genome shotgun
sequence; n=1; Tetraodon nigroviridis|Rep: Chromosome 2
SCAF14705, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 2759
Score = 36.3 bits (80), Expect = 0.41
Identities = 17/38 (44%), Positives = 20/38 (52%)
Frame = -1
Query: 458 YLXKRPPWLWXFPRCIYPCLCQVQPVCPLLCDRGLLCG 345
YL P W W FP P L ++Q +CP DR L CG
Sbjct: 2559 YLMNNPSWSWVFP----PDLLRLQRMCPEKMDRFLCCG 2592
>UniRef50_Q9XD25 Cluster: 50S ribosomal protein L24; n=11;
Bacteria|Rep: 50S ribosomal protein L24 - Leptospira
interrogans
Length = 119
Score = 35.9 bits (79), Expect = 0.55
Identities = 16/45 (35%), Positives = 30/45 (66%)
Frame = +3
Query: 138 KSMPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVYIEGFKEKR 272
K I+K+DEV + G +KG++ GKV+ + +K+ V +EG +++
Sbjct: 15 KKFRIKKNDEVICITGKHKGKR-GKVLSIDKKRDRVIVEGLNKRK 58
>UniRef50_Q64E17 Cluster: Ribosomal protein L21E; n=3; environmental
samples|Rep: Ribosomal protein L21E - uncultured
archaeon GZfos17A3
Length = 130
Score = 34.7 bits (76), Expect = 1.3
Identities = 30/94 (31%), Positives = 44/94 (46%), Gaps = 3/94 (3%)
Frame = +3
Query: 15 NKQVTSSR--RKNRKRHFSAPSHIXRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRGH 188
NKQ+ S RK ++ S P R SP+SK ++Q +S+ IR D V H
Sbjct: 18 NKQMARSHGERKRTRKKLSKPK---RARGLSPISKAIQQFEPGESVHIRIDPSVHKGMPH 74
Query: 189 YKGQ-QVGKVMQVYRKKFVVYIEGFKEKRPMVQQ 287
+ GKV+ + F+V I K KR V++
Sbjct: 75 QRFHGMTGKVIGERGRAFIVEISDGKRKRKKVKE 108
>UniRef50_Q9ZCR6 Cluster: 50S ribosomal protein L24; n=60;
Bacteria|Rep: 50S ribosomal protein L24 - Rickettsia
prowazekii
Length = 113
Score = 34.7 bits (76), Expect = 1.3
Identities = 14/38 (36%), Positives = 27/38 (71%)
Frame = +3
Query: 144 MPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVYIEG 257
+ ++K DEV ++ G YKG++ GKV++V+ ++ V + G
Sbjct: 4 LKVKKGDEVVIITGKYKGKK-GKVLKVFPEENTVVVSG 40
>UniRef50_Q673R7 Cluster: Ribosomal protein L24; n=2; environmental
samples|Rep: Ribosomal protein L24 - uncultured marine
group II euryarchaeote DeepAnt-JyKC7
Length = 145
Score = 34.3 bits (75), Expect = 1.7
Identities = 18/56 (32%), Positives = 29/56 (51%)
Frame = +3
Query: 24 VTSSRRKNRKRHFSAPSHIXRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRGHY 191
V+ K R+ AP H+ R M S L + +++S+ IR D V+V+RG +
Sbjct: 2 VSKKAGKQRQAQTDAPVHVRRKRMRSRLISDEPDLQSIRSVTIRVGDTVEVLRGDF 57
>UniRef50_UPI0000DC0080 Cluster: UPI0000DC0080 related cluster; n=1;
Rattus norvegicus|Rep: UPI0000DC0080 UniRef100 entry -
Rattus norvegicus
Length = 294
Score = 33.9 bits (74), Expect = 2.2
Identities = 23/80 (28%), Positives = 36/80 (45%), Gaps = 4/80 (5%)
Frame = -1
Query: 416 CIYPCLCQVQPVCPLLCDRGLLCGLYSSST*QSHTLKGECRHMLLHHWPF----LFESLN 249
C+ C+C C +C +C + T +HT +G HM +H F F L+
Sbjct: 43 CVRACVCMYVRTCMYVCVCVCVCTDRHTHT-HTHTKRGRRMHMCIHEHSFQLLLSFCWLH 101
Query: 248 VYNKLFTIHLHHFANLLAFV 189
+ F +HL ++ LL FV
Sbjct: 102 RDERCF-VHLQNYIYLLCFV 120
>UniRef50_A2U3B6 Cluster: 50S ribosomal protein L24; n=3;
Bacteria|Rep: 50S ribosomal protein L24 - Polaribacter
dokdonensis MED152
Length = 100
Score = 33.9 bits (74), Expect = 2.2
Identities = 15/41 (36%), Positives = 26/41 (63%)
Frame = +3
Query: 135 VKSMPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVYIEG 257
+K ++ D V+V+ G +KG + GKV+Q+ + K V +EG
Sbjct: 1 MKKFKLKSGDTVKVIAGDHKGSE-GKVLQIIKDKDRVLVEG 40
>UniRef50_Q5QXW9 Cluster: 50S ribosomal protein L24; n=9;
Bacteria|Rep: 50S ribosomal protein L24 - Idiomarina
loihiensis
Length = 104
Score = 33.9 bits (74), Expect = 2.2
Identities = 18/36 (50%), Positives = 25/36 (69%)
Frame = +3
Query: 150 IRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVYIEG 257
I++DDEV V+ G KG+Q GKV++V K V +EG
Sbjct: 5 IKRDDEVVVLAGKDKGKQ-GKVLKVLTDKDRVIVEG 39
>UniRef50_A1IBE3 Cluster: Pleiotropic regulatory protein; n=2;
Desulfobacterales|Rep: Pleiotropic regulatory protein -
Candidatus Desulfococcus oleovorans Hxd3
Length = 380
Score = 33.5 bits (73), Expect = 2.9
Identities = 28/98 (28%), Positives = 51/98 (52%), Gaps = 4/98 (4%)
Frame = +3
Query: 27 TSSRRKNR---KRHFSAPSHIXRV-LMSSPLSKELRQKFNVKSMPIRKDDEVQVVRGHYK 194
T RR+N ++ F A +V L + +S+ + +F V S+P R+DD V +R
Sbjct: 258 TEKRRQNAGTYRKLFEAAGLTEQVRLPADVMSRHIYNQF-VISVPERRDDLVAFLREQEV 316
Query: 195 GQQVGKVMQVYRKKFVVYIEGFKEKRPMVQQHMSAFTL 308
G ++ + ++ +K Y+ G++E V +H +A TL
Sbjct: 317 GVEIYYPVPLHLQKCFAYL-GYQEGDFPVSEHAAAHTL 353
>UniRef50_Q5C6X2 Cluster: Putative uncharacterized protein; n=1;
Schistosoma japonicum|Rep: Putative uncharacterized
protein - Schistosoma japonicum (Blood fluke)
Length = 96
Score = 32.7 bits (71), Expect = 5.1
Identities = 15/32 (46%), Positives = 20/32 (62%)
Frame = -1
Query: 251 NVYNKLFTIHLHHFANLLAFVVSTYNLNFIVF 156
NVY +F +HLH F NLL + Y L+ +VF
Sbjct: 7 NVYILMFFVHLHLFVNLLNSMRGLYFLSVLVF 38
>UniRef50_UPI0000DB7931 Cluster: PREDICTED: similar to shuttle craft
CG3647-PA, isoform A; n=1; Apis mellifera|Rep:
PREDICTED: similar to shuttle craft CG3647-PA, isoform A
- Apis mellifera
Length = 1087
Score = 32.3 bits (70), Expect = 6.8
Identities = 12/42 (28%), Positives = 22/42 (52%)
Frame = -1
Query: 419 RCIYPCLCQVQPVCPLLCDRGLLCGLYSSST*QSHTLKGECR 294
+C C +++ +CPL+C + L CG + + KG C+
Sbjct: 652 KCNQLCCIEIEHICPLICSKTLSCGRHKC---EQRCHKGRCQ 690
>UniRef50_Q67JV4 Cluster: 50S ribosomal protein L24; n=5;
Bacteria|Rep: 50S ribosomal protein L24 -
Symbiobacterium thermophilum
Length = 83
Score = 32.3 bits (70), Expect = 6.8
Identities = 17/38 (44%), Positives = 26/38 (68%)
Frame = +3
Query: 144 MPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVYIEG 257
M ++KD+ V V+ G KG+Q GKV++V K+ V +EG
Sbjct: 1 MHVKKDEIVVVITGKDKGKQ-GKVLRVLPKENRVVVEG 37
>UniRef50_Q9L0C9 Cluster: 50S ribosomal protein L24; n=61;
Bacteria|Rep: 50S ribosomal protein L24 - Streptomyces
coelicolor
Length = 107
Score = 32.3 bits (70), Expect = 6.8
Identities = 17/38 (44%), Positives = 25/38 (65%)
Frame = +3
Query: 144 MPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVYIEG 257
M I+K D VQV+ G KG+Q GKV+ + ++ V +EG
Sbjct: 1 MKIKKGDLVQVITGKDKGKQ-GKVIAAFPREDRVLVEG 37
>UniRef50_O67569 Cluster: 50S ribosomal protein L24; n=10;
Bacteria|Rep: 50S ribosomal protein L24 - Aquifex
aeolicus
Length = 132
Score = 32.3 bits (70), Expect = 6.8
Identities = 16/28 (57%), Positives = 21/28 (75%)
Frame = +3
Query: 150 IRKDDEVQVVRGHYKGQQVGKVMQVYRK 233
I+K D V VVRG KG+Q GKV++VY +
Sbjct: 6 IKKGDTVLVVRGKEKGKQ-GKVLKVYER 32
>UniRef50_O46905 Cluster: Chloroplast 50S ribosomal protein L24;
n=6; cellular organisms|Rep: Chloroplast 50S ribosomal
protein L24 - Guillardia theta (Cryptomonas phi)
Length = 101
Score = 32.3 bits (70), Expect = 6.8
Identities = 16/47 (34%), Positives = 29/47 (61%)
Frame = +3
Query: 144 MPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVYIEGFKEKRPMVQ 284
M I++ D+VQV+ G YKG ++ +V++V RK + ++ K V+
Sbjct: 1 MTIKQGDKVQVIAGSYKG-EITEVLKVIRKSNSLILKNINIKNKHVK 46
>UniRef50_Q8YLR0 Cluster: Alr5236 protein; n=1; Nostoc sp. PCC
7120|Rep: Alr5236 protein - Anabaena sp. (strain PCC
7120)
Length = 454
Score = 31.9 bits (69), Expect = 8.9
Identities = 22/53 (41%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Frame = -1
Query: 266 LFESLNVYNKLFTIHLHHFANLLAFVVSTYNL-NFIVFANRHGFYIEFLS*FL 111
+F L V+ KL T L + A L AF++ NL N +VF N G Y F S F+
Sbjct: 380 IFSLLGVFLKLKTPFLRNLA-LAAFLLHAINLTNQLVFNNTLGIYYWFFSGFI 431
>UniRef50_A4CYH5 Cluster: Putative uncharacterized protein; n=1;
Synechococcus sp. WH 7805|Rep: Putative uncharacterized
protein - Synechococcus sp. (strain WH7805)
Length = 260
Score = 31.9 bits (69), Expect = 8.9
Identities = 15/45 (33%), Positives = 23/45 (51%)
Frame = -2
Query: 445 GLHGCGSFLGVFTLVFAKCSQSALCSAIEDCFAVFIHLQLDNHTL 311
GL GCG F FT + K + A S +D F+ F+ L ++ +
Sbjct: 68 GLDGCGKFFRSFTKLHPKSASLAYGSKSKDSFSYFLDFTLSHNLI 112
>UniRef50_Q1KVT3 Cluster: DNA-directed RNA polymerase; n=1;
Scenedesmus obliquus|Rep: DNA-directed RNA polymerase -
Scenedesmus obliquus
Length = 1529
Score = 31.9 bits (69), Expect = 8.9
Identities = 14/41 (34%), Positives = 23/41 (56%)
Frame = -1
Query: 251 NVYNKLFTIHLHHFANLLAFVVSTYNLNFIVFANRHGFYIE 129
N++N F + L+ F +LAF+ Y ++F F +H F E
Sbjct: 614 NLFNLFFDVSLN-FGKILAFLKLYYEIDFCSFVQKHSFDFE 653
>UniRef50_Q7RN67 Cluster: DHHC zinc finger domain, putative; n=5;
Plasmodium|Rep: DHHC zinc finger domain, putative -
Plasmodium yoelii yoelii
Length = 284
Score = 31.9 bits (69), Expect = 8.9
Identities = 13/48 (27%), Positives = 25/48 (52%)
Frame = -1
Query: 281 HHWPFLFESLNVYNKLFTIHLHHFANLLAFVVSTYNLNFIVFANRHGF 138
HH P++ + YN+ F I L + + F+V+T ++I N + +
Sbjct: 126 HHCPWINNCVGFYNRRFFIQLLFYGLICLFMVATQTFHYIFIDNINAY 173
>UniRef50_Q4YND5 Cluster: Putative uncharacterized protein; n=1;
Plasmodium berghei|Rep: Putative uncharacterized protein
- Plasmodium berghei
Length = 113
Score = 31.9 bits (69), Expect = 8.9
Identities = 17/50 (34%), Positives = 21/50 (42%)
Frame = -1
Query: 275 WPFLFESLNVYNKLFTIHLHHFANLLAFVVSTYNLNFIVFANRHGFYIEF 126
W F F N + + IH+ HF N F Y NF F N F+ F
Sbjct: 30 WFFFFNLFNFFTFFYFIHVVHFFNFFTFF---YLFNFFHFFNFFTFFYLF 76
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 450,356,983
Number of Sequences: 1657284
Number of extensions: 9038094
Number of successful extensions: 24157
Number of sequences better than 10.0: 54
Number of HSP's better than 10.0 without gapping: 23414
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24134
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 31782822356
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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