Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= psV30411.Seq
(515 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY334004-1|AAR01129.1| 194|Anopheles gambiae integrin protein. 26 0.66
AY334003-1|AAR01128.1| 194|Anopheles gambiae integrin protein. 26 0.66
AY334002-1|AAR01127.1| 194|Anopheles gambiae integrin protein. 26 0.66
AY334001-1|AAR01126.1| 194|Anopheles gambiae integrin protein. 26 0.66
AF492464-1|AAM11657.1| 803|Anopheles gambiae beta nu integrin s... 26 0.66
AF444780-1|AAL37901.1| 1152|Anopheles gambiae Toll protein. 25 1.1
AJ439060-16|CAD27767.1| 278|Anopheles gambiae hypothetical prot... 25 1.5
AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein. 25 2.0
AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein. 23 4.6
AY081778-1|AAL91655.1| 507|Anopheles gambiae cytochrome P450 pr... 23 8.1
>AY334004-1|AAR01129.1| 194|Anopheles gambiae integrin protein.
Length = 194
Score = 26.2 bits (55), Expect = 0.66
Identities = 16/41 (39%), Positives = 18/41 (43%), Gaps = 1/41 (2%)
Frame = -2
Query: 454 CXRGLHGCG-SFLGVFTLVFAKCSQSALCSAIEDCFAVFIH 335
C G C SF G F Q ALCS+ EDC +H
Sbjct: 42 CNCGRCSCDESFFGPFCET-KDGEQPALCSSYEDCIRCAVH 81
>AY334003-1|AAR01128.1| 194|Anopheles gambiae integrin protein.
Length = 194
Score = 26.2 bits (55), Expect = 0.66
Identities = 16/41 (39%), Positives = 18/41 (43%), Gaps = 1/41 (2%)
Frame = -2
Query: 454 CXRGLHGCG-SFLGVFTLVFAKCSQSALCSAIEDCFAVFIH 335
C G C SF G F Q ALCS+ EDC +H
Sbjct: 42 CNCGRCSCDESFFGPFCET-KDGEQPALCSSYEDCIRCAVH 81
>AY334002-1|AAR01127.1| 194|Anopheles gambiae integrin protein.
Length = 194
Score = 26.2 bits (55), Expect = 0.66
Identities = 16/41 (39%), Positives = 18/41 (43%), Gaps = 1/41 (2%)
Frame = -2
Query: 454 CXRGLHGCG-SFLGVFTLVFAKCSQSALCSAIEDCFAVFIH 335
C G C SF G F Q ALCS+ EDC +H
Sbjct: 42 CNCGRCSCDESFFGPFCET-KDGEQPALCSSYEDCIRCAVH 81
>AY334001-1|AAR01126.1| 194|Anopheles gambiae integrin protein.
Length = 194
Score = 26.2 bits (55), Expect = 0.66
Identities = 16/41 (39%), Positives = 18/41 (43%), Gaps = 1/41 (2%)
Frame = -2
Query: 454 CXRGLHGCG-SFLGVFTLVFAKCSQSALCSAIEDCFAVFIH 335
C G C SF G F Q ALCS+ EDC +H
Sbjct: 42 CNCGRCSCDESFFGPFCET-KDGEQPALCSSYEDCIRCAVH 81
>AF492464-1|AAM11657.1| 803|Anopheles gambiae beta nu integrin
subunit AgBnu protein.
Length = 803
Score = 26.2 bits (55), Expect = 0.66
Identities = 16/41 (39%), Positives = 18/41 (43%), Gaps = 1/41 (2%)
Frame = -2
Query: 454 CXRGLHGCG-SFLGVFTLVFAKCSQSALCSAIEDCFAVFIH 335
C G C SF G F Q ALCS+ EDC +H
Sbjct: 618 CNCGRCSCDESFFGPFCET-KDGEQPALCSSYEDCIRCAVH 657
>AF444780-1|AAL37901.1| 1152|Anopheles gambiae Toll protein.
Length = 1152
Score = 25.4 bits (53), Expect = 1.1
Identities = 17/55 (30%), Positives = 23/55 (41%)
Frame = -1
Query: 320 SHTLKGECRHMLLHHWPFLFESLNVYNKLFTIHLHHFANLLAFVVSTYNLNFIVF 156
SH GE + L L E +N+L+TI LH F A +N + F
Sbjct: 408 SHNQIGELSAVALQALTKLQELYLDHNQLYTIELHAFKQTTALHTLHLQVNQLAF 462
>AJ439060-16|CAD27767.1| 278|Anopheles gambiae hypothetical protein
protein.
Length = 278
Score = 25.0 bits (52), Expect = 1.5
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = -1
Query: 107 QGRGHQHSXYM*RSTEMPLPVFPS*G 30
Q GH HS +S +P+PVF G
Sbjct: 150 QAAGHLHSSVSEKSKTVPVPVFQKVG 175
>AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.
Length = 1187
Score = 24.6 bits (51), Expect = 2.0
Identities = 16/69 (23%), Positives = 36/69 (52%)
Frame = +3
Query: 108 SKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVYIEGFKEKRPMVQQ 287
SKEL+ K++ + ++++DE++ + K ++ KV K I G ++K P + +
Sbjct: 884 SKELKAKYHQRDKLLKQNDELK-LEIKKKENEITKVRN-ENKDGYDRISGMEQKYPWIPE 941
Query: 288 HMSAFTLQS 314
F +++
Sbjct: 942 DKEFFGVKN 950
>AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.
Length = 1356
Score = 23.4 bits (48), Expect = 4.6
Identities = 7/18 (38%), Positives = 11/18 (61%)
Frame = +1
Query: 280 CNSICRHSPFKVCDCQVE 333
C ++C F CDC++E
Sbjct: 740 CFALCHCCDFYACDCKME 757
>AY081778-1|AAL91655.1| 507|Anopheles gambiae cytochrome P450
protein.
Length = 507
Score = 22.6 bits (46), Expect = 8.1
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = -2
Query: 136 TLNFCLSSLDRGEDINTR 83
T+NFCL L + DI R
Sbjct: 319 TMNFCLYELAKNPDIQGR 336
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 489,854
Number of Sequences: 2352
Number of extensions: 10905
Number of successful extensions: 27
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 46937349
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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