Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= psV30410.Seq
         (640 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT022527-1|AAY54943.1|  307|Drosophila melanogaster IP07888p pro...   140   1e-33
AY071246-1|AAL48868.1|  165|Drosophila melanogaster RE28824p pro...   140   1e-33
AE013599-3797|AAF47152.1|  165|Drosophila melanogaster CG3195-PC...   140   1e-33
AE013599-3796|AAM68299.1|  165|Drosophila melanogaster CG3195-PB...   140   1e-33
AE013599-3795|AAM68298.1|  165|Drosophila melanogaster CG3195-PA...   140   1e-33
AF169227-1|AAF25796.1| 1081|Drosophila melanogaster cut-homeodom...    36   0.061
AE014135-103|AAF59330.2| 1081|Drosophila melanogaster CG1922-PA ...    31   1.3  
AE013599-764|AAF59005.1|  389|Drosophila melanogaster CG13744-PA...    30   2.3  
AY058476-1|AAL13705.1|  976|Drosophila melanogaster GH28062p pro...    29   7.0  

>BT022527-1|AAY54943.1|  307|Drosophila melanogaster IP07888p
           protein.
          Length = 307

 Score =  140 bits (339), Expect = 1e-33
 Identities = 65/88 (73%), Positives = 77/88 (87%)
 Frame = +3

Query: 255 DWKGLKITVQLTVQNRQAQIAVVPSAAALIIRALKEPPRDRKKQKNIKHNGNISLEDVIG 434
           DWKGLKITV LT+QNRQA I+VVPSAA+LII+ALKEPPRDRKKQKNIKH+GNI  ED++ 
Sbjct: 194 DWKGLKITVCLTIQNRQAAISVVPSAASLIIKALKEPPRDRKKQKNIKHSGNIGFEDILA 253

Query: 435 IAKIMRNRSMARYLSGSVKEILGTASQL 518
           IA++MR RSMAR L G+ KE+LGTA  +
Sbjct: 254 IARVMRPRSMARELKGTCKEVLGTAQSV 281



 Score =  101 bits (241), Expect = 1e-21
 Identities = 45/50 (90%), Positives = 48/50 (96%)
 Frame = +1

Query: 103 MPPKFDPNEIKIVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKAT 252
           MPPKFDP E+K+V LRCVGGEVGATSSLAPKIGPLGLSPKK+GDDIAKAT
Sbjct: 143 MPPKFDPTEVKLVYLRCVGGEVGATSSLAPKIGPLGLSPKKIGDDIAKAT 192



 Score = 42.7 bits (96), Expect = 4e-04
 Identities = 15/27 (55%), Positives = 23/27 (85%)
 Frame = +2

Query: 506 SQSVGCTVEGRPPHDLIDDINSGVLTI 586
           +QSVGCTV+G+ PHD+ID++N G + +
Sbjct: 278 AQSVGCTVDGKHPHDVIDELNEGSIEV 304


>AY071246-1|AAL48868.1|  165|Drosophila melanogaster RE28824p
           protein.
          Length = 165

 Score =  140 bits (339), Expect = 1e-33
 Identities = 65/88 (73%), Positives = 77/88 (87%)
 Frame = +3

Query: 255 DWKGLKITVQLTVQNRQAQIAVVPSAAALIIRALKEPPRDRKKQKNIKHNGNISLEDVIG 434
           DWKGLKITV LT+QNRQA I+VVPSAA+LII+ALKEPPRDRKKQKNIKH+GNI  ED++ 
Sbjct: 52  DWKGLKITVCLTIQNRQAAISVVPSAASLIIKALKEPPRDRKKQKNIKHSGNIGFEDILA 111

Query: 435 IAKIMRNRSMARYLSGSVKEILGTASQL 518
           IA++MR RSMAR L G+ KE+LGTA  +
Sbjct: 112 IARVMRPRSMARELKGTCKEVLGTAQSV 139



 Score =  101 bits (241), Expect = 1e-21
 Identities = 45/50 (90%), Positives = 48/50 (96%)
 Frame = +1

Query: 103 MPPKFDPNEIKIVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKAT 252
           MPPKFDP E+K+V LRCVGGEVGATSSLAPKIGPLGLSPKK+GDDIAKAT
Sbjct: 1   MPPKFDPTEVKLVYLRCVGGEVGATSSLAPKIGPLGLSPKKIGDDIAKAT 50



 Score = 42.7 bits (96), Expect = 4e-04
 Identities = 15/27 (55%), Positives = 23/27 (85%)
 Frame = +2

Query: 506 SQSVGCTVEGRPPHDLIDDINSGVLTI 586
           +QSVGCTV+G+ PHD+ID++N G + +
Sbjct: 136 AQSVGCTVDGKHPHDVIDELNEGSIEV 162


>AE013599-3797|AAF47152.1|  165|Drosophila melanogaster CG3195-PC,
           isoform C protein.
          Length = 165

 Score =  140 bits (339), Expect = 1e-33
 Identities = 65/88 (73%), Positives = 77/88 (87%)
 Frame = +3

Query: 255 DWKGLKITVQLTVQNRQAQIAVVPSAAALIIRALKEPPRDRKKQKNIKHNGNISLEDVIG 434
           DWKGLKITV LT+QNRQA I+VVPSAA+LII+ALKEPPRDRKKQKNIKH+GNI  ED++ 
Sbjct: 52  DWKGLKITVCLTIQNRQAAISVVPSAASLIIKALKEPPRDRKKQKNIKHSGNIGFEDILA 111

Query: 435 IAKIMRNRSMARYLSGSVKEILGTASQL 518
           IA++MR RSMAR L G+ KE+LGTA  +
Sbjct: 112 IARVMRPRSMARELKGTCKEVLGTAQSV 139



 Score =  101 bits (241), Expect = 1e-21
 Identities = 45/50 (90%), Positives = 48/50 (96%)
 Frame = +1

Query: 103 MPPKFDPNEIKIVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKAT 252
           MPPKFDP E+K+V LRCVGGEVGATSSLAPKIGPLGLSPKK+GDDIAKAT
Sbjct: 1   MPPKFDPTEVKLVYLRCVGGEVGATSSLAPKIGPLGLSPKKIGDDIAKAT 50



 Score = 42.7 bits (96), Expect = 4e-04
 Identities = 15/27 (55%), Positives = 23/27 (85%)
 Frame = +2

Query: 506 SQSVGCTVEGRPPHDLIDDINSGVLTI 586
           +QSVGCTV+G+ PHD+ID++N G + +
Sbjct: 136 AQSVGCTVDGKHPHDVIDELNEGSIEV 162


>AE013599-3796|AAM68299.1|  165|Drosophila melanogaster CG3195-PB,
           isoform B protein.
          Length = 165

 Score =  140 bits (339), Expect = 1e-33
 Identities = 65/88 (73%), Positives = 77/88 (87%)
 Frame = +3

Query: 255 DWKGLKITVQLTVQNRQAQIAVVPSAAALIIRALKEPPRDRKKQKNIKHNGNISLEDVIG 434
           DWKGLKITV LT+QNRQA I+VVPSAA+LII+ALKEPPRDRKKQKNIKH+GNI  ED++ 
Sbjct: 52  DWKGLKITVCLTIQNRQAAISVVPSAASLIIKALKEPPRDRKKQKNIKHSGNIGFEDILA 111

Query: 435 IAKIMRNRSMARYLSGSVKEILGTASQL 518
           IA++MR RSMAR L G+ KE+LGTA  +
Sbjct: 112 IARVMRPRSMARELKGTCKEVLGTAQSV 139



 Score =  101 bits (241), Expect = 1e-21
 Identities = 45/50 (90%), Positives = 48/50 (96%)
 Frame = +1

Query: 103 MPPKFDPNEIKIVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKAT 252
           MPPKFDP E+K+V LRCVGGEVGATSSLAPKIGPLGLSPKK+GDDIAKAT
Sbjct: 1   MPPKFDPTEVKLVYLRCVGGEVGATSSLAPKIGPLGLSPKKIGDDIAKAT 50



 Score = 42.7 bits (96), Expect = 4e-04
 Identities = 15/27 (55%), Positives = 23/27 (85%)
 Frame = +2

Query: 506 SQSVGCTVEGRPPHDLIDDINSGVLTI 586
           +QSVGCTV+G+ PHD+ID++N G + +
Sbjct: 136 AQSVGCTVDGKHPHDVIDELNEGSIEV 162


>AE013599-3795|AAM68298.1|  165|Drosophila melanogaster CG3195-PA,
           isoform A protein.
          Length = 165

 Score =  140 bits (339), Expect = 1e-33
 Identities = 65/88 (73%), Positives = 77/88 (87%)
 Frame = +3

Query: 255 DWKGLKITVQLTVQNRQAQIAVVPSAAALIIRALKEPPRDRKKQKNIKHNGNISLEDVIG 434
           DWKGLKITV LT+QNRQA I+VVPSAA+LII+ALKEPPRDRKKQKNIKH+GNI  ED++ 
Sbjct: 52  DWKGLKITVCLTIQNRQAAISVVPSAASLIIKALKEPPRDRKKQKNIKHSGNIGFEDILA 111

Query: 435 IAKIMRNRSMARYLSGSVKEILGTASQL 518
           IA++MR RSMAR L G+ KE+LGTA  +
Sbjct: 112 IARVMRPRSMARELKGTCKEVLGTAQSV 139



 Score =  101 bits (241), Expect = 1e-21
 Identities = 45/50 (90%), Positives = 48/50 (96%)
 Frame = +1

Query: 103 MPPKFDPNEIKIVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKAT 252
           MPPKFDP E+K+V LRCVGGEVGATSSLAPKIGPLGLSPKK+GDDIAKAT
Sbjct: 1   MPPKFDPTEVKLVYLRCVGGEVGATSSLAPKIGPLGLSPKKIGDDIAKAT 50



 Score = 42.7 bits (96), Expect = 4e-04
 Identities = 15/27 (55%), Positives = 23/27 (85%)
 Frame = +2

Query: 506 SQSVGCTVEGRPPHDLIDDINSGVLTI 586
           +QSVGCTV+G+ PHD+ID++N G + +
Sbjct: 136 AQSVGCTVDGKHPHDVIDELNEGSIEV 162


>AF169227-1|AAF25796.1| 1081|Drosophila melanogaster cut-homeodomain
           protein protein.
          Length = 1081

 Score = 35.5 bits (78), Expect = 0.061
 Identities = 20/46 (43%), Positives = 25/46 (54%)
 Frame = +2

Query: 452 KQINGPVPFWLSKRDSWHSQSVGCTVEGRPPHDLIDDINSGVLTID 589
           +Q N P+PF L +RD  H Q  G  V   P H +  DIN   LT+D
Sbjct: 102 QQTNMPLPFGLLERDRQHMQH-GREVNTSPVHFVSSDINLDGLTVD 146


>AE014135-103|AAF59330.2| 1081|Drosophila melanogaster CG1922-PA
           protein.
          Length = 1081

 Score = 31.1 bits (67), Expect = 1.3
 Identities = 19/46 (41%), Positives = 24/46 (52%)
 Frame = +2

Query: 452 KQINGPVPFWLSKRDSWHSQSVGCTVEGRPPHDLIDDINSGVLTID 589
           +Q N P+PF L +RD  H Q  G  V   P   +  DIN   LT+D
Sbjct: 102 QQRNMPLPFGLLERDRQHMQH-GREVNTSPVDFVSSDINLDGLTVD 146


>AE013599-764|AAF59005.1|  389|Drosophila melanogaster CG13744-PA
           protein.
          Length = 389

 Score = 30.3 bits (65), Expect = 2.3
 Identities = 15/38 (39%), Positives = 24/38 (63%), Gaps = 2/38 (5%)
 Frame = -1

Query: 502 PRISF--TEPERYRAIDLFLMIFAMPITSSREMLPLCL 395
           PR +F  T+P+RY   D+ L+  A P + +  +LP+CL
Sbjct: 224 PRFNFRMTQPDRY---DIALLKLAQPTSFTEHILPICL 258


>AY058476-1|AAL13705.1|  976|Drosophila melanogaster GH28062p
           protein.
          Length = 976

 Score = 28.7 bits (61), Expect = 7.0
 Identities = 17/41 (41%), Positives = 21/41 (51%)
 Frame = +2

Query: 467 PVPFWLSKRDSWHSQSVGCTVEGRPPHDLIDDINSGVLTID 589
           P+PF L +RD  H Q  G  V   P   +  DIN   LT+D
Sbjct: 2   PLPFGLLERDRQHMQH-GREVNTSPVDFVSSDINLDGLTVD 41


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,907,296
Number of Sequences: 53049
Number of extensions: 656275
Number of successful extensions: 1492
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1427
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1492
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2682985500
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)